RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 SPART-AS1P0CW21 52 aa1.02□□□□□ -2.25
ATXN3-208ENST00000504047 PRLHP81277 87 aa1.02□□□□□ -2.25
ATXN3-208ENST00000504047 COL12A1Q99715 3063 aa1.02□□□□□ -2.25
ATXN3-208ENST00000504047 KMT2BQ9UMN6 2715 aaPredicted RBP1.02□□□□□ -2.25
ATXN3-208ENST00000504047 ANK3Q12955 4377 aaKnown RBP1.02□□□□□ -2.25
ATXN3-208ENST00000504047 RELNP78509 3460 aa1.02□□□□□ -2.25
ATXN3-208ENST00000504047 ATMQ13315 3056 aa1.02□□□□□ -2.25
ATXN3-208ENST00000504047 CELSR1Q9NYQ6 3014 aa1.02□□□□□ -2.25
ATXN3-208ENST00000504047 CREBBPQ92793 2442 aa1.01□□□□□ -2.25
ATXN3-208ENST00000504047 A0A087WTM6 91 aa1.01□□□□□ -2.25
ATXN3-208ENST00000504047 NBPF19A0A087WUL8 3843 aa1.01□□□□□ -2.25
ATXN3-208ENST00000504047 HTN3P15516 51 aa1.01□□□□□ -2.25
ATXN3-208ENST00000504047 DEFB135Q30KP9 77 aa1.01□□□□□ -2.25
ATXN3-208ENST00000504047 DEFB113Q30KQ7 82 aa1.01□□□□□ -2.25
ATXN3-208ENST00000504047 SPTAN1Q13813 2472 aaKnown RBP1□□□□□ -2.25
ATXN3-208ENST00000504047 SVEP1Q4LDE5 3571 aa1□□□□□ -2.25
ATXN3-208ENST00000504047 MAP1AP78559 2803 aaPredicted RBP1□□□□□ -2.25
ATXN3-208ENST00000504047 H0YAA0 97 aa1□□□□□ -2.25
ATXN3-208ENST00000504047 K7EIL1 84 aa1□□□□□ -2.25
ATXN3-208ENST00000504047 DEFB4AO15263 64 aa1□□□□□ -2.25
ATXN3-208ENST00000504047 LRBAP50851 2863 aa1□□□□□ -2.25
ATXN3-208ENST00000504047 CHD6Q8TD26 2715 aa1□□□□□ -2.25
ATXN3-208ENST00000504047 SPTA1P02549 2419 aa0.99□□□□□ -2.25
ATXN3-208ENST00000504047 ACACAQ13085 2346 aa0.99□□□□□ -2.25
ATXN3-208ENST00000504047 A0A096LNI7 61 aa0.99□□□□□ -2.25
ATXN3-208ENST00000504047 Q6ZSA8 131 aa0.99□□□□□ -2.25
ATXN3-208ENST00000504047 ASH1LQ9NR48 2969 aaKnown RBP0.99□□□□□ -2.25
ATXN3-208ENST00000504047 PSORS1C2Q9UIG4 136 aa0.99□□□□□ -2.25
ATXN3-208ENST00000504047 LAMA5O15230 3695 aa0.99□□□□□ -2.25
ATXN3-208ENST00000504047 VPS13CQ709C8 3753 aa0.99□□□□□ -2.25
ATXN3-208ENST00000504047 CELSR2Q9HCU4 2923 aa0.99□□□□□ -2.25
ATXN3-208ENST00000504047 VPS13DQ5THJ4 4388 aa0.99□□□□□ -2.25
ATXN3-208ENST00000504047 ITPR1Q14643 2758 aa0.98□□□□□ -2.25
ATXN3-208ENST00000504047 NBASA2RRP1 2371 aa0.98□□□□□ -2.25
ATXN3-208ENST00000504047 H1FX-AS1Q4G0G2 97 aa0.98□□□□□ -2.25
ATXN3-208ENST00000504047 SSBP3-AS1Q7Z2R9 100 aa0.98□□□□□ -2.25
ATXN3-208ENST00000504047 ANKRD11Q6UB99 2663 aaPredicted RBP0.98□□□□□ -2.25
ATXN3-208ENST00000504047 DNAH8Q96JB1 4490 aa0.97□□□□□ -2.25
ATXN3-208ENST00000504047 SPG11Q96JI7 2443 aa0.97□□□□□ -2.25
ATXN3-208ENST00000504047 CSPG4Q6UVK1 2322 aa0.97□□□□□ -2.25
ATXN3-208ENST00000504047 NCOR2Q9Y618 2525 aa0.97□□□□□ -2.25
ATXN3-208ENST00000504047 HMCN1Q96RW7 5635 aa0.97□□□□□ -2.25
ATXN3-208ENST00000504047 TLN1Q9Y490 2541 aaKnown RBP0.96□□□□□ -2.26
ATXN3-208ENST00000504047 TLN2Q9Y4G6 2542 aa0.96□□□□□ -2.26
ATXN3-208ENST00000504047 OTOGQ6ZRI0 2925 aa0.96□□□□□ -2.26
ATXN3-208ENST00000504047 SETXQ7Z333 2677 aaKnown RBP0.96□□□□□ -2.26
ATXN3-208ENST00000504047 ANKRD17O75179 2603 aaKnown RBP0.96□□□□□ -2.26
ATXN3-208ENST00000504047 TENM2Q9NT68 2774 aa0.96□□□□□ -2.26
ATXN3-208ENST00000504047 NBDYA0A0U1RRE5 68 aa0.96□□□□□ -2.26
ATXN3-208ENST00000504047 TPRXLQ17RH7 258 aa0.96□□□□□ -2.26
ATXN3-208ENST00000504047 CRYBG3Q68DQ2 2970 aa0.96□□□□□ -2.26
ATXN3-208ENST00000504047 COX6B2Q6YFQ2 88 aa0.96□□□□□ -2.26
ATXN3-208ENST00000504047 CRIPTQ9P021 101 aa0.96□□□□□ -2.26
ATXN3-208ENST00000504047 MUC3AQ02505 3323 aa0.96□□□□□ -2.26
ATXN3-208ENST00000504047 GVINP1Q7Z2Y8 2422 aa0.96□□□□□ -2.26
ATXN3-208ENST00000504047 SPTBN4Q9H254 2564 aa0.96□□□□□ -2.26
ATXN3-208ENST00000504047 FN1P02751 2386 aaKnown RBP0.96□□□□□ -2.26
ATXN3-208ENST00000504047 DNAH10Q8IVF4 4471 aa0.95□□□□□ -2.26
ATXN3-208ENST00000504047 JMJD1CQ15652 2540 aa0.95□□□□□ -2.26
ATXN3-208ENST00000504047 FRAS1Q86XX4 4008 aa0.95□□□□□ -2.26
ATXN3-208ENST00000504047 HIVEP3Q5T1R4 2406 aa0.95□□□□□ -2.26
ATXN3-208ENST00000504047 DNAH17Q9UFH2 4485 aa0.95□□□□□ -2.26
ATXN3-208ENST00000504047 CSMD2Q7Z408 3487 aa0.95□□□□□ -2.26
ATXN3-208ENST00000504047 SPINK1P00995 79 aa0.95□□□□□ -2.26
ATXN3-208ENST00000504047 SPINK6Q6UWN8 80 aa0.95□□□□□ -2.26
ATXN3-208ENST00000504047 DEFB123Q8N688 67 aa0.95□□□□□ -2.26
ATXN3-208ENST00000504047 IGF2RP11717 2491 aa0.95□□□□□ -2.26
ATXN3-208ENST00000504047 RIF1Q5UIP0 2472 aaKnown RBP0.95□□□□□ -2.26
ATXN3-208ENST00000504047 FCGBPQ9Y6R7 5405 aaPredicted RBP0.94□□□□□ -2.26
ATXN3-208ENST00000504047 ANK2Q01484 3957 aa0.94□□□□□ -2.26
ATXN3-208ENST00000504047 RPL37P61927 97 aaKnown RBP0.94□□□□□ -2.26
ATXN3-208ENST00000504047 SPACA4Q8TDM5 124 aa0.94□□□□□ -2.26
ATXN3-208ENST00000504047 APCP25054 2843 aa0.94□□□□□ -2.26
ATXN3-208ENST00000504047 DNAH9Q9NYC9 4486 aa0.93□□□□□ -2.26
ATXN3-208ENST00000504047 DYNC2H1Q8NCM8 4307 aaKnown RBP0.93□□□□□ -2.26
ATXN3-208ENST00000504047 TRRAPQ9Y4A5 3859 aa0.93□□□□□ -2.26
ATXN3-208ENST00000504047 NF1P21359 2839 aa0.93□□□□□ -2.26
ATXN3-208ENST00000504047 UTP20O75691 2785 aaKnown RBP0.93□□□□□ -2.26
ATXN3-208ENST00000504047 DNAH3Q8TD57 4116 aa0.93□□□□□ -2.26
ATXN3-208ENST00000504047 MYO9AB2RTY4 2548 aa0.93□□□□□ -2.26
ATXN3-208ENST00000504047 ZFYVE26Q68DK2 2539 aa0.93□□□□□ -2.26
ATXN3-208ENST00000504047 CEP295Q9C0D2 2601 aa0.93□□□□□ -2.26
ATXN3-208ENST00000504047 PRKDCP78527 4128 aaKnown RBP0.93□□□□□ -2.26
ATXN3-208ENST00000504047 PTPN13Q12923 2485 aa0.93□□□□□ -2.26
ATXN3-208ENST00000504047 CUBNO60494 3623 aa0.93□□□□□ -2.26
ATXN3-208ENST00000504047 NBEAL2Q6ZNJ1 2754 aa0.92□□□□□ -2.26
ATXN3-208ENST00000504047 F8P00451 2351 aa0.92□□□□□ -2.26
ATXN3-208ENST00000504047 HUWE1Q7Z6Z7 4374 aaKnown RBP0.92□□□□□ -2.26
ATXN3-208ENST00000504047 MXRA5Q9NR99 2828 aa0.92□□□□□ -2.26
ATXN3-208ENST00000504047 C10orf95Q9H7T3 257 aa0.92□□□□□ -2.26
ATXN3-208ENST00000504047 GCN1Q92616 2671 aaKnown RBP0.92□□□□□ -2.26
ATXN3-208ENST00000504047 TEX15Q9BXT5 2789 aa0.92□□□□□ -2.26
ATXN3-208ENST00000504047 DOPEY1Q5JWR5 2465 aa0.92□□□□□ -2.26
ATXN3-208ENST00000504047 DNAH11Q96DT5 4516 aa0.91□□□□□ -2.26
ATXN3-208ENST00000504047 USP9XQ93008 2570 aaPredicted RBP0.91□□□□□ -2.26
ATXN3-208ENST00000504047 S4R3F8 94 aa0.91□□□□□ -2.26
ATXN3-208ENST00000504047 DNAH2Q9P225 4427 aa0.91□□□□□ -2.26
ATXN3-208ENST00000504047 ZANQ9Y493 2812 aa0.91□□□□□ -2.26
ATXN3-208ENST00000504047 FBN2P35556 2912 aa0.91□□□□□ -2.26
ATXN3-208ENST00000504047 EPG5Q9HCE0 2579 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms