RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 PRO0461Q9UI25 63 aa11.56□□□□□ -0.56
LSM6-203ENST00000503982 FSIP2Q5CZC0 6907 aa11.54□□□□□ -0.56
LSM6-203ENST00000503982 KRTAP10-6P60371 365 aaPredicted RBP11.54□□□□□ -0.56
LSM6-203ENST00000503982 MTURNQ8N3F0 131 aa11.54□□□□□ -0.56
LSM6-203ENST00000503982 SMCPP49901 116 aaPredicted RBP11.53□□□□□ -0.56
LSM6-203ENST00000503982 GTF2H5Q6ZYL4 71 aa11.53□□□□□ -0.56
LSM6-203ENST00000503982 C14orf132Q9NPU4 83 aa11.53□□□□□ -0.56
LSM6-203ENST00000503982 LINC00472Q9H8W2 130 aa11.52□□□□□ -0.57
LSM6-203ENST00000503982 LORP23490 312 aaPredicted RBP11.5□□□□□ -0.57
LSM6-203ENST00000503982 SIGMAR1Q99720 223 aa11.5□□□□□ -0.57
LSM6-203ENST00000503982 VPS25Q9BRG1 176 aa11.5□□□□□ -0.57
LSM6-203ENST00000503982 CRCT1Q9UGL9 99 aa11.5□□□□□ -0.57
LSM6-203ENST00000503982 DSCR10P59022 87 aa11.46□□□□□ -0.57
LSM6-203ENST00000503982 FLGP20930 4061 aaPredicted RBP11.45□□□□□ -0.58
LSM6-203ENST00000503982 F8W1H4 67 aa11.44□□□□□ -0.58
LSM6-203ENST00000503982 C20orf166-AS1Q96NR2 134 aa11.43□□□□□ -0.58
LSM6-203ENST00000503982 A8MUU9 505 aa11.41□□□□□ -0.58
LSM6-203ENST00000503982 J3KT08 172 aa11.41□□□□□ -0.58
LSM6-203ENST00000503982 IGKV4-1P06312 121 aa11.4□□□□□ -0.58
LSM6-203ENST00000503982 LINC00313P59037 77 aa11.37□□□□□ -0.59
LSM6-203ENST00000503982 DEFB116Q30KQ4 102 aa11.33□□□□□ -0.6
LSM6-203ENST00000503982 NREPQ16612 68 aa11.3□□□□□ -0.6
LSM6-203ENST00000503982 A0A1B0GVX0 72 aa11.29□□□□□ -0.6
LSM6-203ENST00000503982 C8orf87E5RJ46 101 aa11.28□□□□□ -0.6
LSM6-203ENST00000503982 IGHV6-1A0A0B4J1U7 121 aa11.27□□□□□ -0.61
LSM6-203ENST00000503982 FAM236DA0A1B0GTK5 79 aa11.27□□□□□ -0.61
LSM6-203ENST00000503982 FAM236CP0DP71 79 aa11.27□□□□□ -0.61
LSM6-203ENST00000503982 KRTAP16-1A8MUX0 517 aa11.26□□□□□ -0.61
LSM6-203ENST00000503982 A8MWP4 228 aa11.26□□□□□ -0.61
LSM6-203ENST00000503982 ETDBQ3ZM63 59 aa11.26□□□□□ -0.61
LSM6-203ENST00000503982 NDUFB1O75438 58 aa11.23□□□□□ -0.61
LSM6-203ENST00000503982 NOTCH2NLQ7Z3S9 236 aa11.22□□□□□ -0.61
LSM6-203ENST00000503982 Q6ZVQ6 151 aa11.2□□□□□ -0.62
LSM6-203ENST00000503982 IGKV3D-7A0A0C4DH55 119 aa11.19□□□□□ -0.62
LSM6-203ENST00000503982 A0A1B0GV90 55 aa11.17□□□□□ -0.62
LSM6-203ENST00000503982 PRR15Q8IV56 129 aa11.17□□□□□ -0.62
LSM6-203ENST00000503982 LINC00846Q9NV44 126 aa11.17□□□□□ -0.62
LSM6-203ENST00000503982 RBM12B-AS1Q9P1G2 102 aa11.17□□□□□ -0.62
LSM6-203ENST00000503982 UBL5Q9BZL1 73 aa11.15□□□□□ -0.62
LSM6-203ENST00000503982 BPY2O14599 106 aa11.14□□□□□ -0.63
LSM6-203ENST00000503982 C8orf17Q9NRJ1 99 aa11.13□□□□□ -0.63
LSM6-203ENST00000503982 FAM240AA0A1B0GVK7 77 aa11.09□□□□□ -0.63
LSM6-203ENST00000503982 Q8N9P0 234 aaPredicted RBP11.09□□□□□ -0.63
LSM6-203ENST00000503982 K7EQZ3 153 aa11.08□□□□□ -0.64
LSM6-203ENST00000503982 ACYP1P07311 99 aa11.08□□□□□ -0.64
LSM6-203ENST00000503982 MMP24-AS1A0A0U1RRL7 71 aa11.06□□□□□ -0.64
LSM6-203ENST00000503982 HRES1P13985 223 aa11.06□□□□□ -0.64
LSM6-203ENST00000503982 KRTAP9-8Q9BYQ0 159 aa11.04□□□□□ -0.64
LSM6-203ENST00000503982 TMEM254Q8TBM7 123 aa11.02□□□□□ -0.65
LSM6-203ENST00000503982 CXCL6P80162 114 aa11.01□□□□□ -0.65
LSM6-203ENST00000503982 ZCCHC13Q8WW36 166 aaKnown RBP11□□□□□ -0.65
LSM6-203ENST00000503982 MPLKIPQ8TAP9 179 aa10.98□□□□□ -0.65
LSM6-203ENST00000503982 MRPL34Q9BQ48 92 aaKnown RBP10.98□□□□□ -0.65
LSM6-203ENST00000503982 hDV103S1A0JD37 113 aa10.97□□□□□ -0.65
LSM6-203ENST00000503982 Q8N9L7 120 aa10.94□□□□□ -0.66
LSM6-203ENST00000503982 MT2AP02795 61 aa10.92□□□□□ -0.66
LSM6-203ENST00000503982 SPINK7P58062 85 aa10.92□□□□□ -0.66
LSM6-203ENST00000503982 ATP5EP2Q5VTU8 51 aa10.9□□□□□ -0.66
LSM6-203ENST00000503982 USH2AO75445 5202 aa10.9□□□□□ -0.66
LSM6-203ENST00000503982 KRTAP10-10P60014 251 aa10.88□□□□□ -0.67
LSM6-203ENST00000503982 CASC2Q6XLA1 102 aa10.88□□□□□ -0.67
LSM6-203ENST00000503982 HCG22E2RYF7 251 aa10.86□□□□□ -0.67
LSM6-203ENST00000503982 MT1FP04733 61 aa10.84□□□□□ -0.67
LSM6-203ENST00000503982 J3QR89 54 aa10.82□□□□□ -0.68
LSM6-203ENST00000503982 WFDC13Q8IUB5 93 aa10.82□□□□□ -0.68
LSM6-203ENST00000503982 LINC00643Q86TS7 51 aa10.8□□□□□ -0.68
LSM6-203ENST00000503982 SSPOA2VEC9 5147 aa10.8□□□□□ -0.68
LSM6-203ENST00000503982 NDUFS5O43920 106 aa10.75□□□□□ -0.69
LSM6-203ENST00000503982 LCE2BO14633 110 aa10.7□□□□□ -0.7
LSM6-203ENST00000503982 KRTAP9-3Q9BYQ3 159 aa10.7□□□□□ -0.7
LSM6-203ENST00000503982 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.69□□□□□ -0.7
LSM6-203ENST00000503982 Q5W150 140 aa10.69□□□□□ -0.7
LSM6-203ENST00000503982 TP53AIP1Q9HCN2 124 aa10.69□□□□□ -0.7
LSM6-203ENST00000503982 KRTAP9-7A8MTY7 169 aa10.63□□□□□ -0.71
LSM6-203ENST00000503982 HIST1H4AP62805 103 aaKnown RBP10.62□□□□□ -0.71
LSM6-203ENST00000503982 KRTAP19-1Q8IUB9 90 aa10.62□□□□□ -0.71
LSM6-203ENST00000503982 K7ERU9 68 aa10.61□□□□□ -0.71
LSM6-203ENST00000503982 C7orf65Q6ZTY9 151 aa10.6□□□□□ -0.71
LSM6-203ENST00000503982 IGKV2D-30A0A075B6S6 120 aa10.59□□□□□ -0.71
LSM6-203ENST00000503982 IGKV2-30P06310 120 aa10.59□□□□□ -0.71
LSM6-203ENST00000503982 FCGBPQ9Y6R7 5405 aaPredicted RBP10.58□□□□□ -0.72
LSM6-203ENST00000503982 H1FX-AS1Q4G0G2 97 aa10.56□□□□□ -0.72
LSM6-203ENST00000503982 A0A087WVE0 104 aa10.53□□□□□ -0.72
LSM6-203ENST00000503982 KRTAP3-3Q9BYR6 98 aa10.53□□□□□ -0.72
LSM6-203ENST00000503982 KRTAP3-2Q9BYR7 98 aa10.53□□□□□ -0.72
LSM6-203ENST00000503982 IMUPQ9GZP8 106 aa10.48□□□□□ -0.73
LSM6-203ENST00000503982 TRAV22A0A0B4J277 110 aa10.47□□□□□ -0.73
LSM6-203ENST00000503982 UQCRQO14949 82 aa10.47□□□□□ -0.73
LSM6-203ENST00000503982 OCR1Q9BZK8 76 aa10.4□□□□□ -0.74
LSM6-203ENST00000503982 LOC101927531A0A1B0GV80 90 aa10.39□□□□□ -0.75
LSM6-203ENST00000503982 ATOX1O00244 68 aa10.39□□□□□ -0.75
LSM6-203ENST00000503982 C4orf26Q17RF5 130 aa10.38□□□□□ -0.75
LSM6-203ENST00000503982 MT-ATP8P03928 68 aa10.35□□□□□ -0.75
LSM6-203ENST00000503982 CYP4F30PQ9H0H9 118 aa10.35□□□□□ -0.75
LSM6-203ENST00000503982 MACF1Q9UPN3 7388 aaKnown RBP10.34□□□□□ -0.75
LSM6-203ENST00000503982 KRTAP19-6Q3LI70 58 aa10.34□□□□□ -0.75
LSM6-203ENST00000503982 H0Y9P7 68 aa10.32□□□□□ -0.76
LSM6-203ENST00000503982 SYNE2Q8WXH0 6885 aaKnown RBP10.26□□□□□ -0.77
LSM6-203ENST00000503982 C5orf47Q569G3 176 aa10.26□□□□□ -0.77
LSM6-203ENST00000503982 FAM236AA0A1B0GUQ0 79 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms