RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 BAALC-AS2P0C853 105 aa6.09□□□□□ -1.43
MED28-203ENST00000503945 NOTCH2NLQ7Z3S9 236 aa6.09□□□□□ -1.43
MED28-203ENST00000503945 TMA7Q9Y2S6 64 aaKnown RBP6.09□□□□□ -1.43
MED28-203ENST00000503945 KRTAP16-1A8MUX0 517 aa6.08□□□□□ -1.44
MED28-203ENST00000503945 C9JAW5 83 aa6.07□□□□□ -1.44
MED28-203ENST00000503945 C21orf62-AS1Q17RA5 79 aa6.07□□□□□ -1.44
MED28-203ENST00000503945 FAM236DA0A1B0GTK5 79 aa6.06□□□□□ -1.44
MED28-203ENST00000503945 FAM236CP0DP71 79 aa6.06□□□□□ -1.44
MED28-203ENST00000503945 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
MED28-203ENST00000503945 C8orf87E5RJ46 101 aa6.05□□□□□ -1.44
MED28-203ENST00000503945 A0A1B0GVX0 72 aa6.04□□□□□ -1.44
MED28-203ENST00000503945 J3KT08 172 aa6.04□□□□□ -1.44
MED28-203ENST00000503945 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
MED28-203ENST00000503945 NDUFB1O75438 58 aa6.02□□□□□ -1.45
MED28-203ENST00000503945 Q6ZQT0 140 aa6.02□□□□□ -1.45
MED28-203ENST00000503945 JMJD7-PLA2G4BH0Y9G9 81 aa6.01□□□□□ -1.45
MED28-203ENST00000503945 M0R143 59 aa6.01□□□□□ -1.45
MED28-203ENST00000503945 ATXN8Q156A1 80 aa6.01□□□□□ -1.45
MED28-203ENST00000503945 FCGBPQ9Y6R7 5405 aaPredicted RBP6□□□□□ -1.45
MED28-203ENST00000503945 MTURNQ8N3F0 131 aa6□□□□□ -1.45
MED28-203ENST00000503945 A0A1B0GW54 56 aa5.99□□□□□ -1.45
MED28-203ENST00000503945 PDE6GP18545 87 aa5.99□□□□□ -1.45
MED28-203ENST00000503945 HRES1P13985 223 aa5.98□□□□□ -1.45
MED28-203ENST00000503945 LYRM7Q5U5X0 104 aa5.97□□□□□ -1.45
MED28-203ENST00000503945 MPLKIPQ8TAP9 179 aa5.97□□□□□ -1.45
MED28-203ENST00000503945 ZCCHC13Q8WW36 166 aaKnown RBP5.97□□□□□ -1.45
MED28-203ENST00000503945 LOC110117498A0A087WWA1 95 aa5.95□□□□□ -1.46
MED28-203ENST00000503945 SPINK7P58062 85 aa5.95□□□□□ -1.46
MED28-203ENST00000503945 NAA38Q9BRA0 125 aaKnown RBP5.95□□□□□ -1.46
MED28-203ENST00000503945 A8MWP4 228 aa5.94□□□□□ -1.46
MED28-203ENST00000503945 Q8N9P0 234 aaPredicted RBP5.94□□□□□ -1.46
MED28-203ENST00000503945 NREPQ16612 68 aa5.92□□□□□ -1.46
MED28-203ENST00000503945 C8orf17Q9NRJ1 99 aa5.92□□□□□ -1.46
MED28-203ENST00000503945 MT2AP02795 61 aa5.91□□□□□ -1.46
MED28-203ENST00000503945 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
MED28-203ENST00000503945 C14orf132Q9NPU4 83 aa5.91□□□□□ -1.46
MED28-203ENST00000503945 IGKV3D-7A0A0C4DH55 119 aa5.9□□□□□ -1.46
MED28-203ENST00000503945 KRTAP10-10P60014 251 aa5.89□□□□□ -1.47
MED28-203ENST00000503945 Q6ZVQ6 151 aa5.89□□□□□ -1.47
MED28-203ENST00000503945 H3BS24 57 aa5.88□□□□□ -1.47
MED28-203ENST00000503945 SMIM6P0DI80 62 aa5.88□□□□□ -1.47
MED28-203ENST00000503945 PRR15Q8IV56 129 aa5.88□□□□□ -1.47
MED28-203ENST00000503945 TSTD3H0UI37 97 aa5.87□□□□□ -1.47
MED28-203ENST00000503945 MT1FP04733 61 aa5.87□□□□□ -1.47
MED28-203ENST00000503945 BATFQ16520 125 aa5.87□□□□□ -1.47
MED28-203ENST00000503945 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
MED28-203ENST00000503945 WFDC13Q8IUB5 93 aa5.83□□□□□ -1.48
MED28-203ENST00000503945 MRPL34Q9BQ48 92 aaKnown RBP5.83□□□□□ -1.48
MED28-203ENST00000503945 SYNE2Q8WXH0 6885 aaKnown RBP5.83□□□□□ -1.48
MED28-203ENST00000503945 MACF1Q9UPN3 7388 aaKnown RBP5.82□□□□□ -1.48
MED28-203ENST00000503945 LOC105371267A0A1B0GV96 52 aa5.82□□□□□ -1.48
MED28-203ENST00000503945 C9orf118A6NHY6 69 aa5.82□□□□□ -1.48
MED28-203ENST00000503945 TMEM254Q8TBM7 123 aa5.82□□□□□ -1.48
MED28-203ENST00000503945 hDV103S1A0JD37 113 aa5.81□□□□□ -1.48
MED28-203ENST00000503945 NDUFS5O43920 106 aa5.81□□□□□ -1.48
MED28-203ENST00000503945 H3BT86 120 aa5.8□□□□□ -1.48
MED28-203ENST00000503945 MMP24-AS1A0A0U1RRL7 71 aa5.79□□□□□ -1.48
MED28-203ENST00000503945 BPY2O14599 106 aa5.79□□□□□ -1.48
MED28-203ENST00000503945 A0A1W2PPM0 123 aa5.78□□□□□ -1.48
MED28-203ENST00000503945 K7EQZ3 153 aa5.77□□□□□ -1.49
MED28-203ENST00000503945 TAX1BP3O14907 124 aa5.76□□□□□ -1.49
MED28-203ENST00000503945 H1FX-AS1Q4G0G2 97 aa5.75□□□□□ -1.49
MED28-203ENST00000503945 LINC00846Q9NV44 126 aa5.73□□□□□ -1.49
MED28-203ENST00000503945 IGKV2D-30A0A075B6S6 120 aa5.72□□□□□ -1.49
MED28-203ENST00000503945 IGKV2-30P06310 120 aa5.72□□□□□ -1.49
MED28-203ENST00000503945 KRTAP19-6Q3LI70 58 aa5.71□□□□□ -1.5
MED28-203ENST00000503945 CASC2Q6XLA1 102 aa5.71□□□□□ -1.5
MED28-203ENST00000503945 Q5W150 140 aa5.7□□□□□ -1.5
MED28-203ENST00000503945 SPCS1Q9Y6A9 102 aa5.7□□□□□ -1.5
MED28-203ENST00000503945 HCG22E2RYF7 251 aa5.68□□□□□ -1.5
MED28-203ENST00000503945 C7orf65Q6ZTY9 151 aa5.68□□□□□ -1.5
MED28-203ENST00000503945 Q8N9L7 120 aa5.68□□□□□ -1.5
MED28-203ENST00000503945 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
MED28-203ENST00000503945 CXCL6P80162 114 aa5.66□□□□□ -1.5
MED28-203ENST00000503945 UBL5Q9BZL1 73 aa5.66□□□□□ -1.5
MED28-203ENST00000503945 C4orf26Q17RF5 130 aa5.63□□□□□ -1.51
MED28-203ENST00000503945 COL5A1-AS1Q5SY13 56 aa5.63□□□□□ -1.51
MED28-203ENST00000503945 KRTAP6-3Q3LI67 103 aa5.62□□□□□ -1.51
MED28-203ENST00000503945 PRO0461Q9UI25 63 aa5.58□□□□□ -1.52
MED28-203ENST00000503945 K7EP34 96 aa5.57□□□□□ -1.52
MED28-203ENST00000503945 GTF2H5Q6ZYL4 71 aa5.55□□□□□ -1.52
MED28-203ENST00000503945 TP53AIP1Q9HCN2 124 aa5.55□□□□□ -1.52
MED28-203ENST00000503945 C5orf47Q569G3 176 aa5.54□□□□□ -1.52
MED28-203ENST00000503945 F8W1H4 67 aa5.53□□□□□ -1.52
MED28-203ENST00000503945 CSAG1Q6PB30 78 aa5.53□□□□□ -1.52
MED28-203ENST00000503945 C1orf64Q8NEQ6 169 aa5.53□□□□□ -1.52
MED28-203ENST00000503945 FAM236AA0A1B0GUQ0 79 aa5.51□□□□□ -1.53
MED28-203ENST00000503945 FAM236BA0A1B0GV22 79 aa5.51□□□□□ -1.53
MED28-203ENST00000503945 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
MED28-203ENST00000503945 S4R3F8 94 aa5.51□□□□□ -1.53
MED28-203ENST00000503945 PCP4L1A6NKN8 68 aa5.5□□□□□ -1.53
MED28-203ENST00000503945 NEBP20929 6669 aa5.49□□□□□ -1.53
MED28-203ENST00000503945 ETDBQ3ZM63 59 aa5.48□□□□□ -1.53
MED28-203ENST00000503945 LCA10Q71F78 164 aa5.46□□□□□ -1.54
MED28-203ENST00000503945 MUC12Q9UKN1 5478 aa5.45□□□□□ -1.54
MED28-203ENST00000503945 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
MED28-203ENST00000503945 KRTAP4-12Q9BQ66 201 aa5.44□□□□□ -1.54
MED28-203ENST00000503945 CYP4F30PQ9H0H9 118 aa5.44□□□□□ -1.54
MED28-203ENST00000503945 ACYP1P07311 99 aa5.41□□□□□ -1.54
MED28-203ENST00000503945 Q5VV11 94 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms