RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 SPRR2EP22531 72 aa7.11□□□□□ -1.27
PDLIM7-210ENST00000503827 SPRR2BP35325 72 aa7.11□□□□□ -1.27
PDLIM7-210ENST00000503827 SPRR2AP35326 72 aa7.11□□□□□ -1.27
PDLIM7-210ENST00000503827 DSCR8Q96T75 97 aa7.11□□□□□ -1.27
PDLIM7-210ENST00000503827 FAM236AA0A1B0GUQ0 79 aa7.1□□□□□ -1.27
PDLIM7-210ENST00000503827 FAM236BA0A1B0GV22 79 aa7.1□□□□□ -1.27
PDLIM7-210ENST00000503827 A0A1B0GV72 72 aa7.1□□□□□ -1.27
PDLIM7-210ENST00000503827 HIST1H4GQ99525 98 aa7.1□□□□□ -1.27
PDLIM7-210ENST00000503827 IGKV3D-7A0A0C4DH55 119 aa7.07□□□□□ -1.28
PDLIM7-210ENST00000503827 J3KT08 172 aa7.05□□□□□ -1.28
PDLIM7-210ENST00000503827 SPRR2FQ96RM1 72 aa7.05□□□□□ -1.28
PDLIM7-210ENST00000503827 SPRR2GQ9BYE4 73 aa7.05□□□□□ -1.28
PDLIM7-210ENST00000503827 HSBP1L1C9JCN9 74 aa7.04□□□□□ -1.28
PDLIM7-210ENST00000503827 COA6Q5JTJ3 125 aaKnown RBP7.04□□□□□ -1.28
PDLIM7-210ENST00000503827 NDUFB1O75438 58 aa7.03□□□□□ -1.28
PDLIM7-210ENST00000503827 H3BQ85 93 aa7.01□□□□□ -1.29
PDLIM7-210ENST00000503827 VPS25Q9BRG1 176 aa7.01□□□□□ -1.29
PDLIM7-210ENST00000503827 IMUPQ9GZP8 106 aa7.01□□□□□ -1.29
PDLIM7-210ENST00000503827 ORMDL1Q9P0S3 153 aa7□□□□□ -1.29
PDLIM7-210ENST00000503827 A0A0B4J2C4 111 aa6.99□□□□□ -1.29
PDLIM7-210ENST00000503827 DNAL4O96015 105 aa6.99□□□□□ -1.29
PDLIM7-210ENST00000503827 C8orf17Q9NRJ1 99 aa6.99□□□□□ -1.29
PDLIM7-210ENST00000503827 TMEM256-PLSCR3K7ERE1 68 aa6.97□□□□□ -1.29
PDLIM7-210ENST00000503827 C5orf47Q569G3 176 aa6.96□□□□□ -1.3
PDLIM7-210ENST00000503827 Q6ZVQ6 151 aa6.94□□□□□ -1.3
PDLIM7-210ENST00000503827 C21orf62-AS1Q17RA5 79 aa6.93□□□□□ -1.3
PDLIM7-210ENST00000503827 C2orf91Q6ZV80 131 aa6.91□□□□□ -1.3
PDLIM7-210ENST00000503827 TRIAP1O43715 76 aa6.9□□□□□ -1.3
PDLIM7-210ENST00000503827 UBE2V1Q13404 147 aa6.9□□□□□ -1.3
PDLIM7-210ENST00000503827 LCE1AQ5T7P2 110 aa6.9□□□□□ -1.3
PDLIM7-210ENST00000503827 PRO1854Q9UHT4 67 aa6.9□□□□□ -1.3
PDLIM7-210ENST00000503827 IGKV2D-30A0A075B6S6 120 aa6.89□□□□□ -1.31
PDLIM7-210ENST00000503827 IGKV2-30P06310 120 aa6.89□□□□□ -1.31
PDLIM7-210ENST00000503827 COX8AP10176 69 aa6.88□□□□□ -1.31
PDLIM7-210ENST00000503827 SPRR2DP22532 72 aa6.88□□□□□ -1.31
PDLIM7-210ENST00000503827 RBM3P98179 157 aaKnown RBP6.87□□□□□ -1.31
PDLIM7-210ENST00000503827 Q6ZQT0 140 aa6.87□□□□□ -1.31
PDLIM7-210ENST00000503827 C7orf65Q6ZTY9 151 aa6.86□□□□□ -1.31
PDLIM7-210ENST00000503827 DLEU1O43261 78 aa6.85□□□□□ -1.31
PDLIM7-210ENST00000503827 KLKP1Q107X0 134 aa6.85□□□□□ -1.31
PDLIM7-210ENST00000503827 MRPL34Q9BQ48 92 aaKnown RBP6.85□□□□□ -1.31
PDLIM7-210ENST00000503827 CSAG1Q6PB30 78 aa6.84□□□□□ -1.31
PDLIM7-210ENST00000503827 TMEM238LA0A1B0GVL6 79 aa6.83□□□□□ -1.32
PDLIM7-210ENST00000503827 A6NJY4 79 aa6.83□□□□□ -1.32
PDLIM7-210ENST00000503827 SMCPP49901 116 aaPredicted RBP6.83□□□□□ -1.32
PDLIM7-210ENST00000503827 C4orf26Q17RF5 130 aa6.83□□□□□ -1.32
PDLIM7-210ENST00000503827 TMEM254Q8TBM7 123 aa6.83□□□□□ -1.32
PDLIM7-210ENST00000503827 NDUFS5O43920 106 aa6.82□□□□□ -1.32
PDLIM7-210ENST00000503827 KRTAP8-1Q8IUC2 63 aa6.82□□□□□ -1.32
PDLIM7-210ENST00000503827 C9JAW5 83 aa6.81□□□□□ -1.32
PDLIM7-210ENST00000503827 HIGD1BQ9P298 99 aa6.81□□□□□ -1.32
PDLIM7-210ENST00000503827 GPR98Q8WXG9 6306 aa6.8□□□□□ -1.32
PDLIM7-210ENST00000503827 PSMB2P49721 201 aa6.8□□□□□ -1.32
PDLIM7-210ENST00000503827 S4R3F8 94 aa6.8□□□□□ -1.32
PDLIM7-210ENST00000503827 S100A2P29034 98 aa6.79□□□□□ -1.32
PDLIM7-210ENST00000503827 PRR15Q8IV56 129 aa6.79□□□□□ -1.32
PDLIM7-210ENST00000503827 CEND1Q8N111 149 aa6.79□□□□□ -1.32
PDLIM7-210ENST00000503827 HIST1H2BLQ99880 126 aa6.79□□□□□ -1.32
PDLIM7-210ENST00000503827 MMP24-AS1A0A0U1RRL7 71 aa6.78□□□□□ -1.32
PDLIM7-210ENST00000503827 COX6CP09669 75 aa6.77□□□□□ -1.33
PDLIM7-210ENST00000503827 HIST3H2BBQ8N257 126 aa6.76□□□□□ -1.33
PDLIM7-210ENST00000503827 C14orf144Q96I85 54 aa6.76□□□□□ -1.33
PDLIM7-210ENST00000503827 hDV103S1A0JD37 113 aa6.74□□□□□ -1.33
PDLIM7-210ENST00000503827 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
PDLIM7-210ENST00000503827 Q5W150 140 aa6.74□□□□□ -1.33
PDLIM7-210ENST00000503827 LCA10Q71F78 164 aa6.73□□□□□ -1.33
PDLIM7-210ENST00000503827 FXYD2P54710 66 aa6.72□□□□□ -1.33
PDLIM7-210ENST00000503827 CRIPTQ9P021 101 aa6.72□□□□□ -1.33
PDLIM7-210ENST00000503827 PRO2289Q9P1D8 64 aa6.72□□□□□ -1.33
PDLIM7-210ENST00000503827 A0A1B0GW54 56 aa6.71□□□□□ -1.34
PDLIM7-210ENST00000503827 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
PDLIM7-210ENST00000503827 BAALC-AS2P0C853 105 aa6.64□□□□□ -1.35
PDLIM7-210ENST00000503827 S100A1P23297 94 aa6.64□□□□□ -1.35
PDLIM7-210ENST00000503827 NREPQ16612 68 aa6.64□□□□□ -1.35
PDLIM7-210ENST00000503827 K7ERJ3 54 aa6.63□□□□□ -1.35
PDLIM7-210ENST00000503827 SPATA45Q537H7 98 aa6.63□□□□□ -1.35
PDLIM7-210ENST00000503827 C1orf64Q8NEQ6 169 aa6.63□□□□□ -1.35
PDLIM7-210ENST00000503827 PAM16Q9Y3D7 125 aa6.63□□□□□ -1.35
PDLIM7-210ENST00000503827 K7EQZ3 153 aa6.62□□□□□ -1.35
PDLIM7-210ENST00000503827 MT1XP80297 61 aa6.61□□□□□ -1.35
PDLIM7-210ENST00000503827 LOC110117498A0A087WWA1 95 aa6.6□□□□□ -1.35
PDLIM7-210ENST00000503827 JMJD7-PLA2G4BH0Y9G9 81 aa6.6□□□□□ -1.35
PDLIM7-210ENST00000503827 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
PDLIM7-210ENST00000503827 SCGB1C2P0DMR2 95 aa6.59□□□□□ -1.35
PDLIM7-210ENST00000503827 PDE6GP18545 87 aa6.58□□□□□ -1.36
PDLIM7-210ENST00000503827 HCG22E2RYF7 251 aa6.57□□□□□ -1.36
PDLIM7-210ENST00000503827 S100A6P06703 90 aa6.56□□□□□ -1.36
PDLIM7-210ENST00000503827 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
PDLIM7-210ENST00000503827 VAMP8Q9BV40 100 aa6.54□□□□□ -1.36
PDLIM7-210ENST00000503827 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
PDLIM7-210ENST00000503827 KRTAP3-3Q9BYR6 98 aa6.54□□□□□ -1.36
PDLIM7-210ENST00000503827 CXCL6P80162 114 aa6.53□□□□□ -1.36
PDLIM7-210ENST00000503827 DSTQ03001 7570 aaKnown RBP6.52□□□□□ -1.37
PDLIM7-210ENST00000503827 HSD52Q0P140 79 aa6.52□□□□□ -1.37
PDLIM7-210ENST00000503827 CASC2Q6XLA1 102 aa6.51□□□□□ -1.37
PDLIM7-210ENST00000503827 C14orf132Q9NPU4 83 aa6.5□□□□□ -1.37
PDLIM7-210ENST00000503827 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
PDLIM7-210ENST00000503827 A8MUN3 132 aa6.46□□□□□ -1.38
PDLIM7-210ENST00000503827 BPY2O14599 106 aa6.46□□□□□ -1.38
PDLIM7-210ENST00000503827 ATXN8Q156A1 80 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms