RNA–Protein interactions for RNA: ENST00000503509.1

SERF1A-203, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2

Gene SERF1A, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-203ENST00000503509 VPS13BQ7Z7G8 4022 aa-0.01□□□□□ -2.41
SERF1A-203ENST00000503509 APOBP04114 4563 aaKnown RBP-0.01□□□□□ -2.41
SERF1A-203ENST00000503509 FLGP20930 4061 aaPredicted RBP-0.01□□□□□ -2.41
SERF1A-203ENST00000503509 HECTD1Q9ULT8 2610 aa-0.01□□□□□ -2.41
SERF1A-203ENST00000503509 LINC00308Q8TCZ7 52 aa-0.01□□□□□ -2.41
SERF1A-203ENST00000503509 DNAH9Q9NYC9 4486 aa-0.02□□□□□ -2.41
SERF1A-203ENST00000503509 SPRR2EP22531 72 aa-0.02□□□□□ -2.41
SERF1A-203ENST00000503509 LYSTQ99698 3801 aa-0.02□□□□□ -2.41
SERF1A-203ENST00000503509 MAP1BP46821 2468 aaKnown RBP-0.02□□□□□ -2.41
SERF1A-203ENST00000503509 LMO7Q8WWI1 1683 aa-0.02□□□□□ -2.41
SERF1A-203ENST00000503509 KIF21BO75037 1637 aa-0.02□□□□□ -2.41
SERF1A-203ENST00000503509 SACSQ9NZJ4 4579 aa-0.03□□□□□ -2.41
SERF1A-203ENST00000503509 PKHD1L1Q86WI1 4243 aa-0.03□□□□□ -2.41
SERF1A-203ENST00000503509 FLNBO75369 2602 aaKnown RBP-0.03□□□□□ -2.41
SERF1A-203ENST00000503509 DSTQ03001 7570 aaKnown RBP-0.04□□□□□ -2.42
SERF1A-203ENST00000503509 IGLV5-48A0A075B6I7 105 aa-0.04□□□□□ -2.42
SERF1A-203ENST00000503509 H0YGX0 51 aa-0.04□□□□□ -2.42
SERF1A-203ENST00000503509 PLNP26678 52 aa-0.04□□□□□ -2.42
SERF1A-203ENST00000503509 SPTBN4Q9H254 2564 aa-0.05□□□□□ -2.42
SERF1A-203ENST00000503509 STAB1Q9NY15 2570 aa-0.05□□□□□ -2.42
SERF1A-203ENST00000503509 DNAH3Q8TD57 4116 aa-0.05□□□□□ -2.42
SERF1A-203ENST00000503509 IQGAP1P46940 1657 aa-0.05□□□□□ -2.42
SERF1A-203ENST00000503509 PDE4DIPQ5VU43 2346 aa-0.05□□□□□ -2.42
SERF1A-203ENST00000503509 DCHS2Q6V1P9 2916 aa-0.06□□□□□ -2.42
SERF1A-203ENST00000503509 NOP10Q9NPE3 64 aaKnown RBP-0.06□□□□□ -2.42
SERF1A-203ENST00000503509 CMC2Q9NRP2 79 aa-0.06□□□□□ -2.42
SERF1A-203ENST00000503509 SETD2Q9BYW2 2564 aaPredicted RBP-0.06□□□□□ -2.42
SERF1A-203ENST00000503509 APC2O95996 2303 aa-0.07□□□□□ -2.42
SERF1A-203ENST00000503509 CUBNO60494 3623 aa-0.07□□□□□ -2.42
SERF1A-203ENST00000503509 SVEP1Q4LDE5 3571 aa-0.07□□□□□ -2.42
SERF1A-203ENST00000503509 SPRR2FQ96RM1 72 aa-0.07□□□□□ -2.42
SERF1A-203ENST00000503509 A0A1B0GUL6 1792 aa-0.07□□□□□ -2.42
SERF1A-203ENST00000503509 TENM2Q9NT68 2774 aa-0.07□□□□□ -2.42
SERF1A-203ENST00000503509 MT1AP04731 61 aa-0.08□□□□□ -2.42
SERF1A-203ENST00000503509 ABRACLQ9P1F3 81 aa-0.08□□□□□ -2.42
SERF1A-203ENST00000503509 KAAG1Q9UBP8 84 aa-0.08□□□□□ -2.42
SERF1A-203ENST00000503509 VPS13DQ5THJ4 4388 aa-0.08□□□□□ -2.42
SERF1A-203ENST00000503509 DNAH2Q9P225 4427 aa-0.08□□□□□ -2.42
SERF1A-203ENST00000503509 FAM208AQ9UK61 1670 aaKnown RBP-0.08□□□□□ -2.42
SERF1A-203ENST00000503509 PDZD2O15018 2839 aa-0.09□□□□□ -2.42
SERF1A-203ENST00000503509 DEFB110Q30KQ9 67 aa-0.09□□□□□ -2.42
SERF1A-203ENST00000503509 KRTAP6-1Q3LI64 71 aa-0.09□□□□□ -2.42
SERF1A-203ENST00000503509 MAP1AP78559 2803 aaPredicted RBP-0.09□□□□□ -2.42
SERF1A-203ENST00000503509 FLNAP21333 2647 aaKnown RBP-0.09□□□□□ -2.42
SERF1A-203ENST00000503509 WNK1Q9H4A3 2382 aa-0.1□□□□□ -2.42
SERF1A-203ENST00000503509 MUC2Q02817 5179 aa-0.1□□□□□ -2.43
SERF1A-203ENST00000503509 DNAH11Q96DT5 4516 aa-0.1□□□□□ -2.43
SERF1A-203ENST00000503509 NF1P21359 2839 aa-0.1□□□□□ -2.43
SERF1A-203ENST00000503509 MUC12Q9UKN1 5478 aa-0.1□□□□□ -2.43
SERF1A-203ENST00000503509 ZANQ9Y493 2812 aa-0.11□□□□□ -2.43
SERF1A-203ENST00000503509 NFAT5O94916 1531 aa-0.11□□□□□ -2.43
SERF1A-203ENST00000503509 MMP24-AS1A0A0U1RRL7 71 aa-0.11□□□□□ -2.43
SERF1A-203ENST00000503509 SMIM27A0A1W2PRY6 76 aa-0.11□□□□□ -2.43
SERF1A-203ENST00000503509 M0QY20 66 aa-0.11□□□□□ -2.43
SERF1A-203ENST00000503509 WFDC10BQ8IUB3 73 aa-0.11□□□□□ -2.43
SERF1A-203ENST00000503509 SONP18583 2426 aaKnown RBP-0.11□□□□□ -2.43
SERF1A-203ENST00000503509 GCN1Q92616 2671 aaKnown RBP-0.12□□□□□ -2.43
SERF1A-203ENST00000503509 SNRPGP15A8MWD9 76 aa-0.12□□□□□ -2.43
SERF1A-203ENST00000503509 CEP290O15078 2479 aa-0.12□□□□□ -2.43
SERF1A-203ENST00000503509 DNAH6Q9C0G6 4158 aa-0.13□□□□□ -2.43
SERF1A-203ENST00000503509 HTTP42858 3142 aa-0.13□□□□□ -2.43
SERF1A-203ENST00000503509 TNP1P09430 55 aa-0.13□□□□□ -2.43
SERF1A-203ENST00000503509 KRTAP19-7Q3SYF9 63 aa-0.13□□□□□ -2.43
SERF1A-203ENST00000503509 KMT2CQ8NEZ4 4911 aaKnown RBP-0.13□□□□□ -2.43
SERF1A-203ENST00000503509 DMXL1Q9Y485 3027 aa-0.13□□□□□ -2.43
SERF1A-203ENST00000503509 RANBP2P49792 3224 aaKnown RBP-0.14□□□□□ -2.43
SERF1A-203ENST00000503509 TFF3Q07654 80 aa-0.14□□□□□ -2.43
SERF1A-203ENST00000503509 TACC2O95359 2948 aa-0.14□□□□□ -2.43
SERF1A-203ENST00000503509 NBASA2RRP1 2371 aa-0.14□□□□□ -2.43
SERF1A-203ENST00000503509 LAMA5O15230 3695 aa-0.15□□□□□ -2.43
SERF1A-203ENST00000503509 IQGAP2Q13576 1575 aa-0.15□□□□□ -2.43
SERF1A-203ENST00000503509 AKAP9Q99996 3911 aa-0.15□□□□□ -2.43
SERF1A-203ENST00000503509 ANKRD11Q6UB99 2663 aaPredicted RBP-0.15□□□□□ -2.43
SERF1A-203ENST00000503509 LINC01546A6NGU7 62 aa-0.15□□□□□ -2.43
SERF1A-203ENST00000503509 ZZEF1O43149 2961 aa-0.15□□□□□ -2.43
SERF1A-203ENST00000503509 FAT1Q14517 4588 aa-0.15□□□□□ -2.43
SERF1A-203ENST00000503509 PCLOQ9Y6V0 5065 aa-0.15□□□□□ -2.43
SERF1A-203ENST00000503509 TRIOO75962 3097 aa-0.15□□□□□ -2.43
SERF1A-203ENST00000503509 PKD1L2Q7Z442 2459 aa-0.16□□□□□ -2.43
SERF1A-203ENST00000503509 TGP01266 2768 aa-0.16□□□□□ -2.44
SERF1A-203ENST00000503509 SRRM2Q9UQ35 2752 aaKnown RBP-0.16□□□□□ -2.44
SERF1A-203ENST00000503509 HERC2O95714 4834 aa-0.16□□□□□ -2.44
SERF1A-203ENST00000503509 HERC1Q15751 4861 aa-0.16□□□□□ -2.44
SERF1A-203ENST00000503509 TEP1Q99973 2627 aaKnown RBP-0.17□□□□□ -2.44
SERF1A-203ENST00000503509 DNAH1Q9P2D7 4330 aa-0.17□□□□□ -2.44
SERF1A-203ENST00000503509 DDX60Q8IY21 1712 aaKnown RBP-0.17□□□□□ -2.44
SERF1A-203ENST00000503509 TRPM2O94759 1503 aa-0.18□□□□□ -2.44
SERF1A-203ENST00000503509 MUC17Q685J3 4493 aa-0.18□□□□□ -2.44
SERF1A-203ENST00000503509 A8MTW9 85 aa-0.18□□□□□ -2.44
SERF1A-203ENST00000503509 SMIM2Q9BVW6 85 aa-0.18□□□□□ -2.44
SERF1A-203ENST00000503509 NBEAL1Q6ZS30 2694 aa-0.19□□□□□ -2.44
SERF1A-203ENST00000503509 M0QZ58 72 aa-0.19□□□□□ -2.44
SERF1A-203ENST00000503509 KRTAP19-8Q3LI54 63 aa-0.19□□□□□ -2.44
SERF1A-203ENST00000503509 CLTCL1P53675 1640 aa-0.2□□□□□ -2.44
SERF1A-203ENST00000503509 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.2□□□□□ -2.44
SERF1A-203ENST00000503509 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.2□□□□□ -2.44
SERF1A-203ENST00000503509 STARD9Q9P2P6 4700 aa-0.2□□□□□ -2.44
SERF1A-203ENST00000503509 DEFB131AP59861 70 aa-0.2□□□□□ -2.44
SERF1A-203ENST00000503509 KRTAP19-5Q3LI72 72 aa-0.2□□□□□ -2.44
SERF1A-203ENST00000503509 DNAH8Q96JB1 4490 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 203.3 ms