RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 J3KT08 172 aa9.64□□□□□ -0.87
PDLIM7-209ENST00000503346 ATP11AUNQ6ZP68 121 aa9.64□□□□□ -0.87
PDLIM7-209ENST00000503346 PCP4L1A6NKN8 68 aa9.63□□□□□ -0.87
PDLIM7-209ENST00000503346 KRTAP16-1A8MUX0 517 aa9.61□□□□□ -0.87
PDLIM7-209ENST00000503346 NOTCH2NLQ7Z3S9 236 aa9.61□□□□□ -0.87
PDLIM7-209ENST00000503346 IGHV6-1A0A0B4J1U7 121 aa9.6□□□□□ -0.87
PDLIM7-209ENST00000503346 A0A1B0GVX0 72 aa9.6□□□□□ -0.87
PDLIM7-209ENST00000503346 C8orf87E5RJ46 101 aa9.59□□□□□ -0.87
PDLIM7-209ENST00000503346 K7EP34 96 aa9.59□□□□□ -0.87
PDLIM7-209ENST00000503346 SMCPP49901 116 aaPredicted RBP9.59□□□□□ -0.87
PDLIM7-209ENST00000503346 KRTAP19-2Q3LHN2 52 aa9.57□□□□□ -0.88
PDLIM7-209ENST00000503346 PRO0461Q9UI25 63 aa9.56□□□□□ -0.88
PDLIM7-209ENST00000503346 NREPQ16612 68 aa9.55□□□□□ -0.88
PDLIM7-209ENST00000503346 LCE2CQ5TA81 110 aa9.54□□□□□ -0.88
PDLIM7-209ENST00000503346 A8MWP4 228 aa9.53□□□□□ -0.88
PDLIM7-209ENST00000503346 NDUFB1O75438 58 aa9.53□□□□□ -0.88
PDLIM7-209ENST00000503346 GTF2H5Q6ZYL4 71 aa9.5□□□□□ -0.89
PDLIM7-209ENST00000503346 IGKV3D-7A0A0C4DH55 119 aa9.49□□□□□ -0.89
PDLIM7-209ENST00000503346 PRR15Q8IV56 129 aa9.45□□□□□ -0.9
PDLIM7-209ENST00000503346 C8orf17Q9NRJ1 99 aa9.45□□□□□ -0.9
PDLIM7-209ENST00000503346 F8W1H4 67 aa9.42□□□□□ -0.9
PDLIM7-209ENST00000503346 Q8N9P0 234 aaPredicted RBP9.42□□□□□ -0.9
PDLIM7-209ENST00000503346 Q6ZVQ6 151 aa9.41□□□□□ -0.9
PDLIM7-209ENST00000503346 MT1HP80294 61 aa9.4□□□□□ -0.9
PDLIM7-209ENST00000503346 BPY2O14599 106 aa9.39□□□□□ -0.91
PDLIM7-209ENST00000503346 COX6B2Q6YFQ2 88 aa9.39□□□□□ -0.91
PDLIM7-209ENST00000503346 K7EQZ3 153 aa9.37□□□□□ -0.91
PDLIM7-209ENST00000503346 MMP24-AS1A0A0U1RRL7 71 aa9.36□□□□□ -0.91
PDLIM7-209ENST00000503346 ZCCHC13Q8WW36 166 aaKnown RBP9.36□□□□□ -0.91
PDLIM7-209ENST00000503346 LINC00846Q9NV44 126 aa9.35□□□□□ -0.91
PDLIM7-209ENST00000503346 ETDBQ3ZM63 59 aa9.34□□□□□ -0.91
PDLIM7-209ENST00000503346 TMEM254Q8TBM7 123 aa9.33□□□□□ -0.92
PDLIM7-209ENST00000503346 UBL5Q9BZL1 73 aa9.32□□□□□ -0.92
PDLIM7-209ENST00000503346 MRPL34Q9BQ48 92 aaKnown RBP9.31□□□□□ -0.92
PDLIM7-209ENST00000503346 FLGP20930 4061 aaPredicted RBP9.31□□□□□ -0.92
PDLIM7-209ENST00000503346 hDV103S1A0JD37 113 aa9.3□□□□□ -0.92
PDLIM7-209ENST00000503346 HRES1P13985 223 aa9.27□□□□□ -0.93
PDLIM7-209ENST00000503346 Q8N9L7 120 aa9.27□□□□□ -0.93
PDLIM7-209ENST00000503346 MPLKIPQ8TAP9 179 aa9.25□□□□□ -0.93
PDLIM7-209ENST00000503346 SPINK7P58062 85 aa9.22□□□□□ -0.93
PDLIM7-209ENST00000503346 M0R2T5 61 aa9.21□□□□□ -0.94
PDLIM7-209ENST00000503346 CASC2Q6XLA1 102 aa9.2□□□□□ -0.94
PDLIM7-209ENST00000503346 WFDC13Q8IUB5 93 aa9.2□□□□□ -0.94
PDLIM7-209ENST00000503346 RBM12B-AS1Q9P1G2 102 aa9.2□□□□□ -0.94
PDLIM7-209ENST00000503346 NDUFS5O43920 106 aa9.19□□□□□ -0.94
PDLIM7-209ENST00000503346 LORP23490 312 aaPredicted RBP9.18□□□□□ -0.94
PDLIM7-209ENST00000503346 KRTAP10-6P60371 365 aaPredicted RBP9.18□□□□□ -0.94
PDLIM7-209ENST00000503346 KRTAP9-2Q9BYQ4 174 aa9.17□□□□□ -0.94
PDLIM7-209ENST00000503346 FAM236DA0A1B0GTK5 79 aa9.16□□□□□ -0.94
PDLIM7-209ENST00000503346 FAM236CP0DP71 79 aa9.16□□□□□ -0.94
PDLIM7-209ENST00000503346 CXCL6P80162 114 aa9.16□□□□□ -0.94
PDLIM7-209ENST00000503346 HCG22E2RYF7 251 aa9.14□□□□□ -0.95
PDLIM7-209ENST00000503346 ACYP1P07311 99 aa9.14□□□□□ -0.95
PDLIM7-209ENST00000503346 A0A1B0GV90 55 aa9.13□□□□□ -0.95
PDLIM7-209ENST00000503346 FAM240AA0A1B0GVK7 77 aa9.12□□□□□ -0.95
PDLIM7-209ENST00000503346 Q5W150 140 aa9.1□□□□□ -0.95
PDLIM7-209ENST00000503346 LCE2DQ5TA82 110 aaPredicted RBP9.07□□□□□ -0.96
PDLIM7-209ENST00000503346 C7orf65Q6ZTY9 151 aa9.02□□□□□ -0.97
PDLIM7-209ENST00000503346 IGKV2D-30A0A075B6S6 120 aa9.01□□□□□ -0.97
PDLIM7-209ENST00000503346 IGKV2-30P06310 120 aa9.01□□□□□ -0.97
PDLIM7-209ENST00000503346 ATP5EP2Q5VTU8 51 aa9.01□□□□□ -0.97
PDLIM7-209ENST00000503346 TP53AIP1Q9HCN2 124 aa8.98□□□□□ -0.97
PDLIM7-209ENST00000503346 KRTAP9-8Q9BYQ0 159 aa8.94□□□□□ -0.98
PDLIM7-209ENST00000503346 LINC00643Q86TS7 51 aa8.93□□□□□ -0.98
PDLIM7-209ENST00000503346 HIST1H4AP62805 103 aaKnown RBP8.89□□□□□ -0.99
PDLIM7-209ENST00000503346 H1FX-AS1Q4G0G2 97 aa8.87□□□□□ -0.99
PDLIM7-209ENST00000503346 J3QR89 54 aa8.85□□□□□ -0.99
PDLIM7-209ENST00000503346 MT2AP02795 61 aa8.83□□□□□ -1
PDLIM7-209ENST00000503346 C4orf26Q17RF5 130 aa8.83□□□□□ -1
PDLIM7-209ENST00000503346 A0A087WVE0 104 aa8.8□□□□□ -1
PDLIM7-209ENST00000503346 FSIP2Q5CZC0 6907 aa8.8□□□□□ -1
PDLIM7-209ENST00000503346 TRAV22A0A0B4J277 110 aa8.79□□□□□ -1
PDLIM7-209ENST00000503346 KRTAP9-6A0A140TA67 174 aa8.79□□□□□ -1
PDLIM7-209ENST00000503346 UQCRQO14949 82 aa8.76□□□□□ -1.01
PDLIM7-209ENST00000503346 MT1FP04733 61 aa8.76□□□□□ -1.01
PDLIM7-209ENST00000503346 CYP4F30PQ9H0H9 118 aa8.75□□□□□ -1.01
PDLIM7-209ENST00000503346 LOC101927531A0A1B0GV80 90 aa8.73□□□□□ -1.01
PDLIM7-209ENST00000503346 KRTAP3-1Q9BYR8 98 aa8.73□□□□□ -1.01
PDLIM7-209ENST00000503346 KRTAP10-10P60014 251 aa8.71□□□□□ -1.02
PDLIM7-209ENST00000503346 C1orf64Q8NEQ6 169 aa8.71□□□□□ -1.02
PDLIM7-209ENST00000503346 CRCT1Q9UGL9 99 aa8.71□□□□□ -1.02
PDLIM7-209ENST00000503346 ATOX1O00244 68 aa8.69□□□□□ -1.02
PDLIM7-209ENST00000503346 H0Y9P7 68 aa8.68□□□□□ -1.02
PDLIM7-209ENST00000503346 KRTAP9-3Q9BYQ3 159 aa8.66□□□□□ -1.02
PDLIM7-209ENST00000503346 OCR1Q9BZK8 76 aa8.65□□□□□ -1.02
PDLIM7-209ENST00000503346 USH2AO75445 5202 aa8.65□□□□□ -1.03
PDLIM7-209ENST00000503346 K7ERU9 68 aa8.61□□□□□ -1.03
PDLIM7-209ENST00000503346 S4R3F8 94 aa8.61□□□□□ -1.03
PDLIM7-209ENST00000503346 MP68P56378 58 aa8.56□□□□□ -1.04
PDLIM7-209ENST00000503346 C5orf47Q569G3 176 aa8.56□□□□□ -1.04
PDLIM7-209ENST00000503346 LCA10Q71F78 164 aa8.56□□□□□ -1.04
PDLIM7-209ENST00000503346 LINC00208Q96KT6 92 aa8.56□□□□□ -1.04
PDLIM7-209ENST00000503346 IMUPQ9GZP8 106 aa8.56□□□□□ -1.04
PDLIM7-209ENST00000503346 LCE2BO14633 110 aa8.55□□□□□ -1.04
PDLIM7-209ENST00000503346 MT-ATP8P03928 68 aa8.52□□□□□ -1.05
PDLIM7-209ENST00000503346 SCGB1A1P11684 91 aa8.52□□□□□ -1.05
PDLIM7-209ENST00000503346 CSAG1Q6PB30 78 aa8.52□□□□□ -1.05
PDLIM7-209ENST00000503346 SSPOA2VEC9 5147 aa8.51□□□□□ -1.05
PDLIM7-209ENST00000503346 H3BPC8 53 aa8.49□□□□□ -1.05
PDLIM7-209ENST00000503346 KLKP1Q107X0 134 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms