RNA–Protein interactions for RNA: ENST00000503137.1

CCDC11P1-201, Transcript of coiled-coil domain containing 11 pseudogene 1, humanhuman

BASIC

Gene CCDC11P1, Length 1,162 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC11P1-201ENST00000503137 A0A087WSZ3 146 aa3.58□□□□□ -1.84
CCDC11P1-201ENST00000503137 BPY2O14599 106 aa3.58□□□□□ -1.84
CCDC11P1-201ENST00000503137 SCGB1A1P11684 91 aa3.58□□□□□ -1.84
CCDC11P1-201ENST00000503137 CD164Q04900 197 aa3.58□□□□□ -1.84
CCDC11P1-201ENST00000503137 SS18L2Q9UHA2 77 aa3.58□□□□□ -1.84
CCDC11P1-201ENST00000503137 HIST1H4AP62805 103 aaKnown RBP3.57□□□□□ -1.84
CCDC11P1-201ENST00000503137 HRCT1Q6UXD1 115 aa3.57□□□□□ -1.84
CCDC11P1-201ENST00000503137 KRTAP1-4P0C5Y4 121 aa3.56□□□□□ -1.84
CCDC11P1-201ENST00000503137 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
CCDC11P1-201ENST00000503137 TYMSOSQ8TAI1 123 aa3.56□□□□□ -1.84
CCDC11P1-201ENST00000503137 LRP1BQ9NZR2 4599 aa3.56□□□□□ -1.84
CCDC11P1-201ENST00000503137 J3KT08 172 aa3.55□□□□□ -1.84
CCDC11P1-201ENST00000503137 KRTAP10-4P60372 401 aaPredicted RBP3.55□□□□□ -1.84
CCDC11P1-201ENST00000503137 KRTAP13-2Q52LG2 175 aa3.55□□□□□ -1.84
CCDC11P1-201ENST00000503137 OCR1Q9BZK8 76 aa3.55□□□□□ -1.84
CCDC11P1-201ENST00000503137 PKHD1P08F94 4074 aa3.55□□□□□ -1.84
CCDC11P1-201ENST00000503137 DYNC1H1Q14204 4646 aaKnown RBP3.55□□□□□ -1.84
CCDC11P1-201ENST00000503137 Q5VSD8 79 aa3.54□□□□□ -1.84
CCDC11P1-201ENST00000503137 NDUFB1O75438 58 aa3.53□□□□□ -1.84
CCDC11P1-201ENST00000503137 SPAG11AQ6PDA7 123 aa3.53□□□□□ -1.84
CCDC11P1-201ENST00000503137 LINC00472Q9H8W2 130 aa3.53□□□□□ -1.84
CCDC11P1-201ENST00000503137 VPS13BQ7Z7G8 4022 aa3.53□□□□□ -1.85
CCDC11P1-201ENST00000503137 KRTAP16-1A8MUX0 517 aa3.52□□□□□ -1.85
CCDC11P1-201ENST00000503137 SPINK1P00995 79 aa3.52□□□□□ -1.85
CCDC11P1-201ENST00000503137 IGKV4-1P06312 121 aa3.52□□□□□ -1.85
CCDC11P1-201ENST00000503137 DEFB116Q30KQ4 102 aa3.52□□□□□ -1.85
CCDC11P1-201ENST00000503137 LIMD2Q9BT23 127 aa3.52□□□□□ -1.85
CCDC11P1-201ENST00000503137 A0A087WVE0 104 aa3.51□□□□□ -1.85
CCDC11P1-201ENST00000503137 FAM236AA0A1B0GUQ0 79 aa3.51□□□□□ -1.85
CCDC11P1-201ENST00000503137 FAM236BA0A1B0GV22 79 aa3.51□□□□□ -1.85
CCDC11P1-201ENST00000503137 A8MWP4 228 aa3.51□□□□□ -1.85
CCDC11P1-201ENST00000503137 DSCR10P59022 87 aa3.51□□□□□ -1.85
CCDC11P1-201ENST00000503137 ASB16-AS1Q495Z4 193 aa3.51□□□□□ -1.85
CCDC11P1-201ENST00000503137 Q5XG85 94 aa3.51□□□□□ -1.85
CCDC11P1-201ENST00000503137 LINC00304Q8N9R0 145 aa3.51□□□□□ -1.85
CCDC11P1-201ENST00000503137 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
CCDC11P1-201ENST00000503137 Q8N9L7 120 aa3.5□□□□□ -1.85
CCDC11P1-201ENST00000503137 ATOX1O00244 68 aa3.49□□□□□ -1.85
CCDC11P1-201ENST00000503137 KRTAP10-6P60371 365 aaPredicted RBP3.49□□□□□ -1.85
CCDC11P1-201ENST00000503137 RPS29P62273 56 aaKnown RBP3.49□□□□□ -1.85
CCDC11P1-201ENST00000503137 PRR15Q8IV56 129 aa3.49□□□□□ -1.85
CCDC11P1-201ENST00000503137 ANAPC13Q9BS18 74 aa3.49□□□□□ -1.85
CCDC11P1-201ENST00000503137 RYR3Q15413 4870 aa3.49□□□□□ -1.85
CCDC11P1-201ENST00000503137 APOBP04114 4563 aaKnown RBP3.48□□□□□ -1.85
CCDC11P1-201ENST00000503137 K7EQZ3 153 aa3.48□□□□□ -1.85
CCDC11P1-201ENST00000503137 SMIM20Q8N5G0 67 aa3.48□□□□□ -1.85
CCDC11P1-201ENST00000503137 Q96NJ1 140 aa3.48□□□□□ -1.85
CCDC11P1-201ENST00000503137 HCG22E2RYF7 251 aa3.47□□□□□ -1.85
CCDC11P1-201ENST00000503137 C1orf195Q5TG92 126 aa3.47□□□□□ -1.85
CCDC11P1-201ENST00000503137 IGHV6-1A0A0B4J1U7 121 aa3.46□□□□□ -1.86
CCDC11P1-201ENST00000503137 A0A1B0GVX0 72 aa3.46□□□□□ -1.86
CCDC11P1-201ENST00000503137 KRTAP10-8P60410 259 aa3.46□□□□□ -1.86
CCDC11P1-201ENST00000503137 CASC2Q6XLA1 102 aa3.45□□□□□ -1.86
CCDC11P1-201ENST00000503137 TRAV7A0A075B6U4 112 aa3.44□□□□□ -1.86
CCDC11P1-201ENST00000503137 hDV103S1A0JD37 113 aa3.44□□□□□ -1.86
CCDC11P1-201ENST00000503137 C8orf87E5RJ46 101 aa3.44□□□□□ -1.86
CCDC11P1-201ENST00000503137 SEC61GP60059 68 aa3.44□□□□□ -1.86
CCDC11P1-201ENST00000503137 WFDC13Q8IUB5 93 aa3.44□□□□□ -1.86
CCDC11P1-201ENST00000503137 SERP2Q8N6R1 65 aa3.44□□□□□ -1.86
CCDC11P1-201ENST00000503137 C8orf17Q9NRJ1 99 aa3.44□□□□□ -1.86
CCDC11P1-201ENST00000503137 FAT1Q14517 4588 aa3.44□□□□□ -1.86
CCDC11P1-201ENST00000503137 OXTP01178 125 aa3.43□□□□□ -1.86
CCDC11P1-201ENST00000503137 LINC00313P59037 77 aa3.43□□□□□ -1.86
CCDC11P1-201ENST00000503137 MMP24-AS1A0A0U1RRL7 71 aa3.42□□□□□ -1.86
CCDC11P1-201ENST00000503137 UQCRQO14949 82 aa3.42□□□□□ -1.86
CCDC11P1-201ENST00000503137 COX7CP15954 63 aa3.42□□□□□ -1.86
CCDC11P1-201ENST00000503137 HSPG2P98160 4391 aa3.42□□□□□ -1.86
CCDC11P1-201ENST00000503137 TMEM254Q8TBM7 123 aa3.41□□□□□ -1.86
CCDC11P1-201ENST00000503137 TP53AIP1Q9HCN2 124 aa3.41□□□□□ -1.86
CCDC11P1-201ENST00000503137 RYR1P21817 5038 aa3.41□□□□□ -1.86
CCDC11P1-201ENST00000503137 NDUFS5O43920 106 aa3.4□□□□□ -1.87
CCDC11P1-201ENST00000503137 C5orf47Q569G3 176 aa3.4□□□□□ -1.87
CCDC11P1-201ENST00000503137 MRPL34Q9BQ48 92 aaKnown RBP3.4□□□□□ -1.87
CCDC11P1-201ENST00000503137 PKHD1L1Q86WI1 4243 aa3.39□□□□□ -1.87
CCDC11P1-201ENST00000503137 CCDC179H3BU77 68 aa3.38□□□□□ -1.87
CCDC11P1-201ENST00000503137 MT1HL1P0DM35 61 aa3.38□□□□□ -1.87
CCDC11P1-201ENST00000503137 MP68P56378 58 aa3.38□□□□□ -1.87
CCDC11P1-201ENST00000503137 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
CCDC11P1-201ENST00000503137 FP248Q71RG6 208 aaPredicted RBP3.37□□□□□ -1.87
CCDC11P1-201ENST00000503137 C20orf197Q8N268 126 aa3.37□□□□□ -1.87
CCDC11P1-201ENST00000503137 RETNLBQ9BQ08 111 aa3.37□□□□□ -1.87
CCDC11P1-201ENST00000503137 KIAA1109Q2LD37 5005 aa3.37□□□□□ -1.87
CCDC11P1-201ENST00000503137 EPPK1P58107 5090 aaKnown RBP3.36□□□□□ -1.87
CCDC11P1-201ENST00000503137 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
CCDC11P1-201ENST00000503137 FLG2Q5D862 2391 aaPredicted RBP3.36□□□□□ -1.87
CCDC11P1-201ENST00000503137 H0Y9P7 68 aa3.35□□□□□ -1.87
CCDC11P1-201ENST00000503137 H3BPC8 53 aa3.35□□□□□ -1.87
CCDC11P1-201ENST00000503137 TRAV22A0A0B4J277 110 aa3.34□□□□□ -1.87
CCDC11P1-201ENST00000503137 NDUFC1O43677 76 aa3.34□□□□□ -1.87
CCDC11P1-201ENST00000503137 SNURFQ9Y675 71 aa3.34□□□□□ -1.87
CCDC11P1-201ENST00000503137 DMBT1Q9UGM3 2413 aaPredicted RBP3.34□□□□□ -1.87
CCDC11P1-201ENST00000503137 A0A0U1RQV1 116 aa3.33□□□□□ -1.88
CCDC11P1-201ENST00000503137 C9orf92A6NGG3 77 aa3.33□□□□□ -1.88
CCDC11P1-201ENST00000503137 KLKP1Q107X0 134 aa3.33□□□□□ -1.88
CCDC11P1-201ENST00000503137 PRR4Q16378 134 aa3.33□□□□□ -1.88
CCDC11P1-201ENST00000503137 C1orf64Q8NEQ6 169 aa3.33□□□□□ -1.88
CCDC11P1-201ENST00000503137 LINC00208Q96KT6 92 aa3.33□□□□□ -1.88
CCDC11P1-201ENST00000503137 C20orf166-AS1Q96NR2 134 aa3.31□□□□□ -1.88
CCDC11P1-201ENST00000503137 LRP1Q07954 4544 aaKnown RBP3.31□□□□□ -1.88
CCDC11P1-201ENST00000503137 TNXBP22105 4242 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms