RNA–Protein interactions for RNA: ENST00000502730.5

TNFRSF25-217, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-217ENST00000502730 FAM236CP0DP71 79 aa11.37□□□□□ -0.59
TNFRSF25-217ENST00000502730 C9JAW5 83 aa11.36□□□□□ -0.59
TNFRSF25-217ENST00000502730 C8orf87E5RJ46 101 aa11.36□□□□□ -0.59
TNFRSF25-217ENST00000502730 Q6ZQT0 140 aa11.34□□□□□ -0.59
TNFRSF25-217ENST00000502730 MT2AP02795 61 aa11.3□□□□□ -0.6
TNFRSF25-217ENST00000502730 M0R143 59 aa11.29□□□□□ -0.6
TNFRSF25-217ENST00000502730 ATXN8Q156A1 80 aa11.29□□□□□ -0.6
TNFRSF25-217ENST00000502730 RBM12B-AS1Q9P1G2 102 aa11.29□□□□□ -0.6
TNFRSF25-217ENST00000502730 J3KT08 172 aa11.28□□□□□ -0.6
TNFRSF25-217ENST00000502730 USH2AO75445 5202 aa11.27□□□□□ -0.61
TNFRSF25-217ENST00000502730 ZCCHC13Q8WW36 166 aaKnown RBP11.27□□□□□ -0.61
TNFRSF25-217ENST00000502730 LOC110117498A0A087WWA1 95 aa11.24□□□□□ -0.61
TNFRSF25-217ENST00000502730 MT1FP04733 61 aa11.23□□□□□ -0.61
TNFRSF25-217ENST00000502730 JMJD7-PLA2G4BH0Y9G9 81 aa11.22□□□□□ -0.61
TNFRSF25-217ENST00000502730 C21orf62-AS1Q17RA5 79 aa11.22□□□□□ -0.61
TNFRSF25-217ENST00000502730 C14orf132Q9NPU4 83 aa11.22□□□□□ -0.61
TNFRSF25-217ENST00000502730 Q8N9P0 234 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF25-217ENST00000502730 IGKV3D-7A0A0C4DH55 119 aa11.2□□□□□ -0.62
TNFRSF25-217ENST00000502730 SPINK7P58062 85 aa11.2□□□□□ -0.62
TNFRSF25-217ENST00000502730 C8orf17Q9NRJ1 99 aa11.2□□□□□ -0.62
TNFRSF25-217ENST00000502730 SSPOA2VEC9 5147 aa11.2□□□□□ -0.62
TNFRSF25-217ENST00000502730 A8MWP4 228 aa11.19□□□□□ -0.62
TNFRSF25-217ENST00000502730 NDUFB1O75438 58 aa11.18□□□□□ -0.62
TNFRSF25-217ENST00000502730 SMIM6P0DI80 62 aa11.17□□□□□ -0.62
TNFRSF25-217ENST00000502730 BATFQ16520 125 aa11.13□□□□□ -0.63
TNFRSF25-217ENST00000502730 A0A1B0GW54 56 aa11.12□□□□□ -0.63
TNFRSF25-217ENST00000502730 LCE2BO14633 110 aa11.11□□□□□ -0.63
TNFRSF25-217ENST00000502730 PDE6GP18545 87 aa11.11□□□□□ -0.63
TNFRSF25-217ENST00000502730 KRTAP10-10P60014 251 aa11.09□□□□□ -0.63
TNFRSF25-217ENST00000502730 Q6ZVQ6 151 aa11.09□□□□□ -0.63
TNFRSF25-217ENST00000502730 KRTAP9-3Q9BYQ3 159 aa11.09□□□□□ -0.63
TNFRSF25-217ENST00000502730 LYRM7Q5U5X0 104 aa11.07□□□□□ -0.64
TNFRSF25-217ENST00000502730 WFDC13Q8IUB5 93 aa11.07□□□□□ -0.64
TNFRSF25-217ENST00000502730 PRR15Q8IV56 129 aa11.07□□□□□ -0.64
TNFRSF25-217ENST00000502730 MTURNQ8N3F0 131 aa11.06□□□□□ -0.64
TNFRSF25-217ENST00000502730 MMP24-AS1A0A0U1RRL7 71 aa11.05□□□□□ -0.64
TNFRSF25-217ENST00000502730 NREPQ16612 68 aa11.05□□□□□ -0.64
TNFRSF25-217ENST00000502730 TSTD3H0UI37 97 aa11.03□□□□□ -0.64
TNFRSF25-217ENST00000502730 KRTAP9-1A8MXZ3 250 aaPredicted RBP11□□□□□ -0.65
TNFRSF25-217ENST00000502730 K7EQZ3 153 aa11□□□□□ -0.65
TNFRSF25-217ENST00000502730 C9orf118A6NHY6 69 aa10.99□□□□□ -0.65
TNFRSF25-217ENST00000502730 TAX1BP3O14907 124 aa10.99□□□□□ -0.65
TNFRSF25-217ENST00000502730 MRPL34Q9BQ48 92 aaKnown RBP10.99□□□□□ -0.65
TNFRSF25-217ENST00000502730 TMEM254Q8TBM7 123 aa10.98□□□□□ -0.65
TNFRSF25-217ENST00000502730 H3BT86 120 aa10.96□□□□□ -0.65
TNFRSF25-217ENST00000502730 A0A1W2PPM0 123 aa10.95□□□□□ -0.66
TNFRSF25-217ENST00000502730 KRTAP19-1Q8IUB9 90 aa10.94□□□□□ -0.66
TNFRSF25-217ENST00000502730 FCGBPQ9Y6R7 5405 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF25-217ENST00000502730 LOC105371267A0A1B0GV96 52 aa10.93□□□□□ -0.66
TNFRSF25-217ENST00000502730 hDV103S1A0JD37 113 aa10.92□□□□□ -0.66
TNFRSF25-217ENST00000502730 NDUFS5O43920 106 aa10.89□□□□□ -0.67
TNFRSF25-217ENST00000502730 KRTAP9-7A8MTY7 169 aa10.88□□□□□ -0.67
TNFRSF25-217ENST00000502730 BPY2O14599 106 aa10.85□□□□□ -0.67
TNFRSF25-217ENST00000502730 Q5W150 140 aa10.85□□□□□ -0.67
TNFRSF25-217ENST00000502730 Q8N9L7 120 aa10.85□□□□□ -0.67
TNFRSF25-217ENST00000502730 SMCPP49901 116 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF25-217ENST00000502730 IGKV2D-30A0A075B6S6 120 aa10.8□□□□□ -0.68
TNFRSF25-217ENST00000502730 IGKV2-30P06310 120 aa10.8□□□□□ -0.68
TNFRSF25-217ENST00000502730 H1FX-AS1Q4G0G2 97 aa10.79□□□□□ -0.68
TNFRSF25-217ENST00000502730 SPCS1Q9Y6A9 102 aa10.79□□□□□ -0.68
TNFRSF25-217ENST00000502730 CASC2Q6XLA1 102 aa10.74□□□□□ -0.69
TNFRSF25-217ENST00000502730 HCG22E2RYF7 251 aa10.73□□□□□ -0.69
TNFRSF25-217ENST00000502730 C7orf65Q6ZTY9 151 aa10.73□□□□□ -0.69
TNFRSF25-217ENST00000502730 PRO0461Q9UI25 63 aa10.68□□□□□ -0.7
TNFRSF25-217ENST00000502730 KRTAP19-6Q3LI70 58 aa10.67□□□□□ -0.7
TNFRSF25-217ENST00000502730 LINC00846Q9NV44 126 aa10.67□□□□□ -0.7
TNFRSF25-217ENST00000502730 MACF1Q9UPN3 7388 aaKnown RBP10.65□□□□□ -0.7
TNFRSF25-217ENST00000502730 C4orf26Q17RF5 130 aa10.65□□□□□ -0.7
TNFRSF25-217ENST00000502730 CXCL6P80162 114 aa10.59□□□□□ -0.71
TNFRSF25-217ENST00000502730 COL5A1-AS1Q5SY13 56 aa10.59□□□□□ -0.71
TNFRSF25-217ENST00000502730 K7EP34 96 aa10.58□□□□□ -0.72
TNFRSF25-217ENST00000502730 UBL5Q9BZL1 73 aa10.57□□□□□ -0.72
TNFRSF25-217ENST00000502730 SYNE2Q8WXH0 6885 aaKnown RBP10.55□□□□□ -0.72
TNFRSF25-217ENST00000502730 KRTAP3-1Q9BYR8 98 aa10.53□□□□□ -0.72
TNFRSF25-217ENST00000502730 C5orf47Q569G3 176 aa10.48□□□□□ -0.73
TNFRSF25-217ENST00000502730 C1orf64Q8NEQ6 169 aa10.39□□□□□ -0.75
TNFRSF25-217ENST00000502730 S4R3F8 94 aa10.39□□□□□ -0.75
TNFRSF25-217ENST00000502730 ETDBQ3ZM63 59 aa10.37□□□□□ -0.75
TNFRSF25-217ENST00000502730 GTF2H5Q6ZYL4 71 aa10.36□□□□□ -0.75
TNFRSF25-217ENST00000502730 LCA10Q71F78 164 aa10.36□□□□□ -0.75
TNFRSF25-217ENST00000502730 FAM236AA0A1B0GUQ0 79 aa10.33□□□□□ -0.76
TNFRSF25-217ENST00000502730 FAM236BA0A1B0GV22 79 aa10.33□□□□□ -0.76
TNFRSF25-217ENST00000502730 F8W1H4 67 aa10.32□□□□□ -0.76
TNFRSF25-217ENST00000502730 TP53AIP1Q9HCN2 124 aa10.32□□□□□ -0.76
TNFRSF25-217ENST00000502730 PCP4L1A6NKN8 68 aa10.3□□□□□ -0.76
TNFRSF25-217ENST00000502730 CSAG1Q6PB30 78 aa10.28□□□□□ -0.76
TNFRSF25-217ENST00000502730 MT1BP07438 61 aa10.27□□□□□ -0.77
TNFRSF25-217ENST00000502730 KRTAP3-3Q9BYR6 98 aa10.23□□□□□ -0.77
TNFRSF25-217ENST00000502730 CYP4F30PQ9H0H9 118 aa10.22□□□□□ -0.77
TNFRSF25-217ENST00000502730 A0A087WVE0 104 aa10.21□□□□□ -0.77
TNFRSF25-217ENST00000502730 KRTAP6-3Q3LI67 103 aa10.2□□□□□ -0.78
TNFRSF25-217ENST00000502730 SPRR2GQ9BYE4 73 aa10.2□□□□□ -0.78
TNFRSF25-217ENST00000502730 KRTAP19-8Q3LI54 63 aa10.18□□□□□ -0.78
TNFRSF25-217ENST00000502730 Q5VV11 94 aa10.16□□□□□ -0.78
TNFRSF25-217ENST00000502730 TRAV22A0A0B4J277 110 aa10.15□□□□□ -0.78
TNFRSF25-217ENST00000502730 KLKP1Q107X0 134 aa10.13□□□□□ -0.79
TNFRSF25-217ENST00000502730 A6NN06 94 aa10.12□□□□□ -0.79
TNFRSF25-217ENST00000502730 LOC101927531A0A1B0GV80 90 aa10.09□□□□□ -0.79
TNFRSF25-217ENST00000502730 ACYP1P07311 99 aa10.05□□□□□ -0.8
TNFRSF25-217ENST00000502730 HIST1H4AP62805 103 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms