RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 J3KT08 172 aa8.94□□□□□ -0.98
PRKCB-210ENST00000498739 GTF2H5Q6ZYL4 71 aa8.94□□□□□ -0.98
PRKCB-210ENST00000498739 PRO0461Q9UI25 63 aa8.94□□□□□ -0.98
PRKCB-210ENST00000498739 A0A1B0GVX0 72 aa8.91□□□□□ -0.98
PRKCB-210ENST00000498739 NREPQ16612 68 aa8.91□□□□□ -0.98
PRKCB-210ENST00000498739 ATP11AUNQ6ZP68 121 aa8.91□□□□□ -0.98
PRKCB-210ENST00000498739 C20orf166-AS1Q96NR2 134 aa8.91□□□□□ -0.98
PRKCB-210ENST00000498739 NOTCH2NLQ7Z3S9 236 aa8.9□□□□□ -0.98
PRKCB-210ENST00000498739 A8MUU9 505 aa8.89□□□□□ -0.99
PRKCB-210ENST00000498739 KRTAP16-1A8MUX0 517 aa8.87□□□□□ -0.99
PRKCB-210ENST00000498739 C8orf87E5RJ46 101 aa8.87□□□□□ -0.99
PRKCB-210ENST00000498739 NDUFB1O75438 58 aa8.87□□□□□ -0.99
PRKCB-210ENST00000498739 A8MWP4 228 aa8.85□□□□□ -0.99
PRKCB-210ENST00000498739 F8W1H4 67 aa8.84□□□□□ -0.99
PRKCB-210ENST00000498739 FAT4Q6V0I7 4981 aa8.83□□□□□ -1
PRKCB-210ENST00000498739 IGKV3D-7A0A0C4DH55 119 aa8.81□□□□□ -1
PRKCB-210ENST00000498739 C8orf17Q9NRJ1 99 aa8.79□□□□□ -1
PRKCB-210ENST00000498739 ETDBQ3ZM63 59 aa8.78□□□□□ -1
PRKCB-210ENST00000498739 Q6ZVQ6 151 aa8.78□□□□□ -1
PRKCB-210ENST00000498739 BPY2O14599 106 aa8.77□□□□□ -1.01
PRKCB-210ENST00000498739 PRR15Q8IV56 129 aa8.77□□□□□ -1.01
PRKCB-210ENST00000498739 K7EQZ3 153 aa8.75□□□□□ -1.01
PRKCB-210ENST00000498739 LCE2AQ5TA79 106 aaPredicted RBP8.75□□□□□ -1.01
PRKCB-210ENST00000498739 LINC00846Q9NV44 126 aa8.74□□□□□ -1.01
PRKCB-210ENST00000498739 UBL5Q9BZL1 73 aa8.73□□□□□ -1.01
PRKCB-210ENST00000498739 KRTAP19-2Q3LHN2 52 aa8.72□□□□□ -1.01
PRKCB-210ENST00000498739 MMP24-AS1A0A0U1RRL7 71 aa8.7□□□□□ -1.02
PRKCB-210ENST00000498739 LCE2CQ5TA81 110 aa8.7□□□□□ -1.02
PRKCB-210ENST00000498739 Q8N9P0 234 aaPredicted RBP8.69□□□□□ -1.02
PRKCB-210ENST00000498739 A0A1B0GV90 55 aa8.67□□□□□ -1.02
PRKCB-210ENST00000498739 COX6B2Q6YFQ2 88 aa8.67□□□□□ -1.02
PRKCB-210ENST00000498739 Q8N9L7 120 aa8.67□□□□□ -1.02
PRKCB-210ENST00000498739 TMEM254Q8TBM7 123 aa8.67□□□□□ -1.02
PRKCB-210ENST00000498739 ZCCHC13Q8WW36 166 aaKnown RBP8.66□□□□□ -1.02
PRKCB-210ENST00000498739 MRPL34Q9BQ48 92 aaKnown RBP8.66□□□□□ -1.02
PRKCB-210ENST00000498739 hDV103S1A0JD37 113 aa8.65□□□□□ -1.02
PRKCB-210ENST00000498739 WFDC13Q8IUB5 93 aa8.61□□□□□ -1.03
PRKCB-210ENST00000498739 NDUFS5O43920 106 aa8.6□□□□□ -1.03
PRKCB-210ENST00000498739 MT1HP80294 61 aa8.59□□□□□ -1.03
PRKCB-210ENST00000498739 CASC2Q6XLA1 102 aa8.59□□□□□ -1.03
PRKCB-210ENST00000498739 ACYP1P07311 99 aa8.56□□□□□ -1.04
PRKCB-210ENST00000498739 CXCL6P80162 114 aa8.54□□□□□ -1.04
PRKCB-210ENST00000498739 HCG22E2RYF7 251 aa8.53□□□□□ -1.04
PRKCB-210ENST00000498739 HRES1P13985 223 aa8.53□□□□□ -1.04
PRKCB-210ENST00000498739 SPINK7P58062 85 aa8.53□□□□□ -1.04
PRKCB-210ENST00000498739 FAM240AA0A1B0GVK7 77 aa8.52□□□□□ -1.05
PRKCB-210ENST00000498739 FAM236DA0A1B0GTK5 79 aa8.5□□□□□ -1.05
PRKCB-210ENST00000498739 FAM236CP0DP71 79 aa8.5□□□□□ -1.05
PRKCB-210ENST00000498739 RBM12B-AS1Q9P1G2 102 aa8.5□□□□□ -1.05
PRKCB-210ENST00000498739 M0R2T5 61 aa8.49□□□□□ -1.05
PRKCB-210ENST00000498739 MPLKIPQ8TAP9 179 aa8.48□□□□□ -1.05
PRKCB-210ENST00000498739 Q5W150 140 aa8.44□□□□□ -1.06
PRKCB-210ENST00000498739 FLGP20930 4061 aaPredicted RBP8.42□□□□□ -1.06
PRKCB-210ENST00000498739 ATP5EP2Q5VTU8 51 aa8.42□□□□□ -1.06
PRKCB-210ENST00000498739 IGKV2D-30A0A075B6S6 120 aa8.4□□□□□ -1.06
PRKCB-210ENST00000498739 IGKV2-30P06310 120 aa8.4□□□□□ -1.06
PRKCB-210ENST00000498739 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
PRKCB-210ENST00000498739 HIST1H4AP62805 103 aaKnown RBP8.37□□□□□ -1.07
PRKCB-210ENST00000498739 C7orf65Q6ZTY9 151 aa8.37□□□□□ -1.07
PRKCB-210ENST00000498739 LINC00643Q86TS7 51 aa8.36□□□□□ -1.07
PRKCB-210ENST00000498739 J3QR89 54 aa8.35□□□□□ -1.07
PRKCB-210ENST00000498739 LORP23490 312 aaPredicted RBP8.35□□□□□ -1.07
PRKCB-210ENST00000498739 TP53AIP1Q9HCN2 124 aa8.35□□□□□ -1.07
PRKCB-210ENST00000498739 KRTAP9-2Q9BYQ4 174 aa8.3□□□□□ -1.08
PRKCB-210ENST00000498739 A0A087WVE0 104 aa8.28□□□□□ -1.08
PRKCB-210ENST00000498739 TRAV22A0A0B4J277 110 aa8.21□□□□□ -1.1
PRKCB-210ENST00000498739 C4orf26Q17RF5 130 aa8.21□□□□□ -1.1
PRKCB-210ENST00000498739 LCE2DQ5TA82 110 aaPredicted RBP8.2□□□□□ -1.1
PRKCB-210ENST00000498739 H1FX-AS1Q4G0G2 97 aa8.19□□□□□ -1.1
PRKCB-210ENST00000498739 UQCRQO14949 82 aa8.17□□□□□ -1.1
PRKCB-210ENST00000498739 KRTAP9-8Q9BYQ0 159 aa8.16□□□□□ -1.1
PRKCB-210ENST00000498739 K7ERU9 68 aa8.15□□□□□ -1.1
PRKCB-210ENST00000498739 LOC101927531A0A1B0GV80 90 aa8.13□□□□□ -1.11
PRKCB-210ENST00000498739 H0Y9P7 68 aa8.13□□□□□ -1.11
PRKCB-210ENST00000498739 CYP4F30PQ9H0H9 118 aa8.13□□□□□ -1.11
PRKCB-210ENST00000498739 ATOX1O00244 68 aa8.1□□□□□ -1.11
PRKCB-210ENST00000498739 MT2AP02795 61 aa8.09□□□□□ -1.11
PRKCB-210ENST00000498739 C1orf64Q8NEQ6 169 aa8.09□□□□□ -1.11
PRKCB-210ENST00000498739 KRTAP3-1Q9BYR8 98 aa8.07□□□□□ -1.12
PRKCB-210ENST00000498739 OCR1Q9BZK8 76 aa8.07□□□□□ -1.12
PRKCB-210ENST00000498739 MT-ATP8P03928 68 aa8.04□□□□□ -1.12
PRKCB-210ENST00000498739 SCGB1A1P11684 91 aa8.04□□□□□ -1.12
PRKCB-210ENST00000498739 IMUPQ9GZP8 106 aa8.03□□□□□ -1.12
PRKCB-210ENST00000498739 MT1FP04733 61 aa8.02□□□□□ -1.13
PRKCB-210ENST00000498739 MP68P56378 58 aa8.02□□□□□ -1.13
PRKCB-210ENST00000498739 LINC00208Q96KT6 92 aa8.02□□□□□ -1.13
PRKCB-210ENST00000498739 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
PRKCB-210ENST00000498739 S4R3F8 94 aa7.99□□□□□ -1.13
PRKCB-210ENST00000498739 C5orf47Q569G3 176 aa7.98□□□□□ -1.13
PRKCB-210ENST00000498739 LCA10Q71F78 164 aa7.94□□□□□ -1.14
PRKCB-210ENST00000498739 KRTAP9-6A0A140TA67 174 aa7.93□□□□□ -1.14
PRKCB-210ENST00000498739 KLKP1Q107X0 134 aa7.93□□□□□ -1.14
PRKCB-210ENST00000498739 FAM236AA0A1B0GUQ0 79 aa7.92□□□□□ -1.14
PRKCB-210ENST00000498739 FAM236BA0A1B0GV22 79 aa7.92□□□□□ -1.14
PRKCB-210ENST00000498739 H3BPC8 53 aa7.91□□□□□ -1.14
PRKCB-210ENST00000498739 FSIP2Q5CZC0 6907 aa7.89□□□□□ -1.15
PRKCB-210ENST00000498739 KRTAP9-3Q9BYQ3 159 aa7.89□□□□□ -1.15
PRKCB-210ENST00000498739 CRCT1Q9UGL9 99 aa7.89□□□□□ -1.15
PRKCB-210ENST00000498739 CSAG1Q6PB30 78 aa7.88□□□□□ -1.15
PRKCB-210ENST00000498739 SMIM20Q8N5G0 67 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms