RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 FAM236AA0A1B0GUQ0 79 aa5.34□□□□□ -1.55
CDK9-205ENST00000498339 FAM236BA0A1B0GV22 79 aa5.34□□□□□ -1.55
CDK9-205ENST00000498339 KRTAP5-9P26371 169 aa5.34□□□□□ -1.55
CDK9-205ENST00000498339 Q5VV11 94 aa5.34□□□□□ -1.55
CDK9-205ENST00000498339 J3KT08 172 aa5.32□□□□□ -1.56
CDK9-205ENST00000498339 KRTAP2-3P0C7H8 128 aa5.32□□□□□ -1.56
CDK9-205ENST00000498339 KRTAP2-4Q9BYR9 128 aa5.32□□□□□ -1.56
CDK9-205ENST00000498339 IGKV3D-7A0A0C4DH55 119 aa5.31□□□□□ -1.56
CDK9-205ENST00000498339 NDUFB1O75438 58 aa5.31□□□□□ -1.56
CDK9-205ENST00000498339 H3BQ85 93 aa5.3□□□□□ -1.56
CDK9-205ENST00000498339 TMEM256-PLSCR3K7ERE1 68 aa5.3□□□□□ -1.56
CDK9-205ENST00000498339 MT1BP07438 61 aa5.3□□□□□ -1.56
CDK9-205ENST00000498339 TRIAP1O43715 76 aa5.29□□□□□ -1.56
CDK9-205ENST00000498339 COX8AP10176 69 aa5.29□□□□□ -1.56
CDK9-205ENST00000498339 S100A2P29034 98 aa5.29□□□□□ -1.56
CDK9-205ENST00000498339 S100A1P23297 94 aa5.28□□□□□ -1.56
CDK9-205ENST00000498339 C8orf17Q9NRJ1 99 aa5.28□□□□□ -1.56
CDK9-205ENST00000498339 PRO1854Q9UHT4 67 aa5.28□□□□□ -1.56
CDK9-205ENST00000498339 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
CDK9-205ENST00000498339 TMEM238LA0A1B0GVL6 79 aa5.25□□□□□ -1.57
CDK9-205ENST00000498339 A6NJY4 79 aa5.25□□□□□ -1.57
CDK9-205ENST00000498339 PSMB2P49721 201 aa5.25□□□□□ -1.57
CDK9-205ENST00000498339 HIST1H2BLQ99880 126 aa5.25□□□□□ -1.57
CDK9-205ENST00000498339 Q6ZVQ6 151 aa5.24□□□□□ -1.57
CDK9-205ENST00000498339 IMUPQ9GZP8 106 aa5.24□□□□□ -1.57
CDK9-205ENST00000498339 IGKV2D-30A0A075B6S6 120 aa5.23□□□□□ -1.57
CDK9-205ENST00000498339 IGKV2-30P06310 120 aa5.23□□□□□ -1.57
CDK9-205ENST00000498339 RBM3P98179 157 aaKnown RBP5.23□□□□□ -1.57
CDK9-205ENST00000498339 UBE2V1Q13404 147 aa5.23□□□□□ -1.57
CDK9-205ENST00000498339 C5orf47Q569G3 176 aa5.23□□□□□ -1.57
CDK9-205ENST00000498339 HIST3H2BBQ8N257 126 aa5.23□□□□□ -1.57
CDK9-205ENST00000498339 DLEU1O43261 78 aa5.22□□□□□ -1.57
CDK9-205ENST00000498339 C21orf62-AS1Q17RA5 79 aa5.22□□□□□ -1.57
CDK9-205ENST00000498339 CEND1Q8N111 149 aa5.22□□□□□ -1.57
CDK9-205ENST00000498339 C14orf144Q96I85 54 aa5.22□□□□□ -1.57
CDK9-205ENST00000498339 NDUFS5O43920 106 aa5.21□□□□□ -1.58
CDK9-205ENST00000498339 SPRR2EP22531 72 aa5.21□□□□□ -1.58
CDK9-205ENST00000498339 SPRR2BP35325 72 aa5.21□□□□□ -1.58
CDK9-205ENST00000498339 SPRR2AP35326 72 aa5.21□□□□□ -1.58
CDK9-205ENST00000498339 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.58
CDK9-205ENST00000498339 HIGD1BQ9P298 99 aa5.21□□□□□ -1.58
CDK9-205ENST00000498339 Q6ZQT0 140 aa5.2□□□□□ -1.58
CDK9-205ENST00000498339 COX6CP09669 75 aa5.19□□□□□ -1.58
CDK9-205ENST00000498339 C7orf65Q6ZTY9 151 aa5.19□□□□□ -1.58
CDK9-205ENST00000498339 C2orf91Q6ZV80 131 aa5.19□□□□□ -1.58
CDK9-205ENST00000498339 SPRR2GQ9BYE4 73 aa5.19□□□□□ -1.58
CDK9-205ENST00000498339 C9JAW5 83 aa5.18□□□□□ -1.58
CDK9-205ENST00000498339 FXYD2P54710 66 aa5.18□□□□□ -1.58
CDK9-205ENST00000498339 SPRR2FQ96RM1 72 aa5.18□□□□□ -1.58
CDK9-205ENST00000498339 MRPL34Q9BQ48 92 aaKnown RBP5.18□□□□□ -1.58
CDK9-205ENST00000498339 S100A6P06703 90 aa5.17□□□□□ -1.58
CDK9-205ENST00000498339 PAM16Q9Y3D7 125 aa5.17□□□□□ -1.58
CDK9-205ENST00000498339 TMEM254Q8TBM7 123 aa5.16□□□□□ -1.58
CDK9-205ENST00000498339 K7ERJ3 54 aa5.15□□□□□ -1.59
CDK9-205ENST00000498339 C4orf26Q17RF5 130 aa5.15□□□□□ -1.59
CDK9-205ENST00000498339 SPATA45Q537H7 98 aa5.15□□□□□ -1.59
CDK9-205ENST00000498339 MMP24-AS1A0A0U1RRL7 71 aa5.13□□□□□ -1.59
CDK9-205ENST00000498339 PRR15Q8IV56 129 aa5.13□□□□□ -1.59
CDK9-205ENST00000498339 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
CDK9-205ENST00000498339 KRTAP2-1Q9BYU5 128 aa5.13□□□□□ -1.59
CDK9-205ENST00000498339 S4R3F8 94 aa5.13□□□□□ -1.59
CDK9-205ENST00000498339 hDV103S1A0JD37 113 aa5.11□□□□□ -1.59
CDK9-205ENST00000498339 CSAG1Q6PB30 78 aa5.1□□□□□ -1.59
CDK9-205ENST00000498339 VAMP8Q9BV40 100 aa5.1□□□□□ -1.59
CDK9-205ENST00000498339 SCGB1C2P0DMR2 95 aa5.09□□□□□ -1.59
CDK9-205ENST00000498339 KLKP1Q107X0 134 aa5.09□□□□□ -1.59
CDK9-205ENST00000498339 BAALC-AS2P0C853 105 aa5.07□□□□□ -1.6
CDK9-205ENST00000498339 NREPQ16612 68 aa5.06□□□□□ -1.6
CDK9-205ENST00000498339 Q5W150 140 aa5.06□□□□□ -1.6
CDK9-205ENST00000498339 A0A1B0GW54 56 aa5.05□□□□□ -1.6
CDK9-205ENST00000498339 LCA10Q71F78 164 aa5.05□□□□□ -1.6
CDK9-205ENST00000498339 K7EQZ3 153 aa5.04□□□□□ -1.6
CDK9-205ENST00000498339 HSD52Q0P140 79 aa5.04□□□□□ -1.6
CDK9-205ENST00000498339 JMJD7-PLA2G4BH0Y9G9 81 aa5.03□□□□□ -1.6
CDK9-205ENST00000498339 SPRR2DP22532 72 aa5.03□□□□□ -1.6
CDK9-205ENST00000498339 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
CDK9-205ENST00000498339 LOC110117498A0A087WWA1 95 aa5.02□□□□□ -1.61
CDK9-205ENST00000498339 SMCPP49901 116 aaPredicted RBP5.02□□□□□ -1.61
CDK9-205ENST00000498339 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
CDK9-205ENST00000498339 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
CDK9-205ENST00000498339 HCG22E2RYF7 251 aa5□□□□□ -1.61
CDK9-205ENST00000498339 PDE6GP18545 87 aa5□□□□□ -1.61
CDK9-205ENST00000498339 C14orf132Q9NPU4 83 aa5□□□□□ -1.61
CDK9-205ENST00000498339 C1orf64Q8NEQ6 169 aa4.99□□□□□ -1.61
CDK9-205ENST00000498339 KRTAP3-1Q9BYR8 98 aa4.98□□□□□ -1.61
CDK9-205ENST00000498339 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
CDK9-205ENST00000498339 CRIPTQ9P021 101 aa4.97□□□□□ -1.61
CDK9-205ENST00000498339 ATXN8Q156A1 80 aa4.96□□□□□ -1.62
CDK9-205ENST00000498339 PYY3Q5JQD4 70 aa4.96□□□□□ -1.62
CDK9-205ENST00000498339 CASC2Q6XLA1 102 aa4.96□□□□□ -1.62
CDK9-205ENST00000498339 BPY2O14599 106 aa4.94□□□□□ -1.62
CDK9-205ENST00000498339 CXCL6P80162 114 aa4.94□□□□□ -1.62
CDK9-205ENST00000498339 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
CDK9-205ENST00000498339 Q8N9L7 120 aa4.91□□□□□ -1.62
CDK9-205ENST00000498339 TMA7Q9Y2S6 64 aaKnown RBP4.9□□□□□ -1.63
CDK9-205ENST00000498339 LOC105371267A0A1B0GV96 52 aa4.89□□□□□ -1.63
CDK9-205ENST00000498339 UQCR10Q9UDW1 63 aa4.89□□□□□ -1.63
CDK9-205ENST00000498339 MT1XP80297 61 aa4.88□□□□□ -1.63
CDK9-205ENST00000498339 NAA38Q9BRA0 125 aaKnown RBP4.87□□□□□ -1.63
CDK9-205ENST00000498339 KRTAP3-3Q9BYR6 98 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms