RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 USP9YO00507 2555 aaPredicted RBP1.26□□□□□ -2.21
CALD1-224ENST00000498254 CEP250Q9BV73 2442 aa1.26□□□□□ -2.21
CALD1-224ENST00000498254 FLNAP21333 2647 aaKnown RBP1.25□□□□□ -2.21
CALD1-224ENST00000498254 CACNA1EQ15878 2313 aa1.25□□□□□ -2.21
CALD1-224ENST00000498254 ZANQ9Y493 2812 aa1.25□□□□□ -2.21
CALD1-224ENST00000498254 MMP24-AS1A0A0U1RRL7 71 aa1.25□□□□□ -2.21
CALD1-224ENST00000498254 A8MTW9 85 aa1.25□□□□□ -2.21
CALD1-224ENST00000498254 DEFB130BP0DP73 79 aa1.25□□□□□ -2.21
CALD1-224ENST00000498254 DEFB130AP0DP74 79 aa1.25□□□□□ -2.21
CALD1-224ENST00000498254 COX6B2Q6YFQ2 88 aa1.25□□□□□ -2.21
CALD1-224ENST00000498254 TOMM7Q9P0U1 55 aa1.25□□□□□ -2.21
CALD1-224ENST00000498254 PIEZO2Q9H5I5 2752 aa1.25□□□□□ -2.21
CALD1-224ENST00000498254 DOPEY2Q9Y3R5 2298 aa1.24□□□□□ -2.21
CALD1-224ENST00000498254 ACACBO00763 2458 aa1.24□□□□□ -2.21
CALD1-224ENST00000498254 HIVEP3Q5T1R4 2406 aa1.24□□□□□ -2.21
CALD1-224ENST00000498254 DEFB123Q8N688 67 aa1.24□□□□□ -2.21
CALD1-224ENST00000498254 DEFB105AQ8NG35 78 aa1.24□□□□□ -2.21
CALD1-224ENST00000498254 HYDINQ4G0P3 5121 aa1.24□□□□□ -2.21
CALD1-224ENST00000498254 AHCTF1Q8WYP5 2266 aa1.23□□□□□ -2.21
CALD1-224ENST00000498254 DCHS1Q96JQ0 3298 aa1.23□□□□□ -2.21
CALD1-224ENST00000498254 WT1-ASQ06250 92 aa1.23□□□□□ -2.21
CALD1-224ENST00000498254 RPL39P5Q59GN2 51 aa1.23□□□□□ -2.21
CALD1-224ENST00000498254 KRTAP4-1Q9BYQ7 146 aa1.23□□□□□ -2.21
CALD1-224ENST00000498254 APLNQ9ULZ1 77 aa1.23□□□□□ -2.21
CALD1-224ENST00000498254 TLN1Q9Y490 2541 aaKnown RBP1.23□□□□□ -2.21
CALD1-224ENST00000498254 DEFB108AA8MXU0 73 aa1.22□□□□□ -2.21
CALD1-224ENST00000498254 TMEM167AQ8TBQ9 72 aa1.22□□□□□ -2.21
CALD1-224ENST00000498254 CRCT1Q9UGL9 99 aa1.22□□□□□ -2.21
CALD1-224ENST00000498254 FLG2Q5D862 2391 aaPredicted RBP1.22□□□□□ -2.21
CALD1-224ENST00000498254 KMT2CQ8NEZ4 4911 aaKnown RBP1.22□□□□□ -2.21
CALD1-224ENST00000498254 AKAP13Q12802 2813 aa1.21□□□□□ -2.22
CALD1-224ENST00000498254 BSNQ9UPA5 3926 aa1.21□□□□□ -2.22
CALD1-224ENST00000498254 CELSR1Q9NYQ6 3014 aa1.21□□□□□ -2.22
CALD1-224ENST00000498254 RYR2Q92736 4967 aa1.21□□□□□ -2.22
CALD1-224ENST00000498254 NBEAQ8NFP9 2946 aa1.21□□□□□ -2.22
CALD1-224ENST00000498254 CEP290O15078 2479 aa1.21□□□□□ -2.22
CALD1-224ENST00000498254 LAMA3Q16787 3333 aa1.2□□□□□ -2.22
CALD1-224ENST00000498254 ASCC3Q8N3C0 2202 aaKnown RBP1.2□□□□□ -2.22
CALD1-224ENST00000498254 ROS1P08922 2347 aa1.2□□□□□ -2.22
CALD1-224ENST00000498254 DEFB131AP59861 70 aa1.2□□□□□ -2.22
CALD1-224ENST00000498254 PRLHP81277 87 aa1.2□□□□□ -2.22
CALD1-224ENST00000498254 KNL1Q8NG31 2342 aa1.2□□□□□ -2.22
CALD1-224ENST00000498254 MTORP42345 2549 aa1.19□□□□□ -2.22
CALD1-224ENST00000498254 SPRR1AP35321 89 aa1.19□□□□□ -2.22
CALD1-224ENST00000498254 KRTAP10-4P60372 401 aaPredicted RBP1.19□□□□□ -2.22
CALD1-224ENST00000498254 PRO0255Q9UI72 69 aa1.19□□□□□ -2.22
CALD1-224ENST00000498254 XIRP2A4UGR9 3374 aa1.18□□□□□ -2.22
CALD1-224ENST00000498254 CLPSL2Q6UWE3 100 aa1.18□□□□□ -2.22
CALD1-224ENST00000498254 FSIP2Q5CZC0 6907 aa1.18□□□□□ -2.22
CALD1-224ENST00000498254 ABCA13Q86UQ4 5058 aa1.17□□□□□ -2.22
CALD1-224ENST00000498254 K7EIM0 57 aa1.17□□□□□ -2.22
CALD1-224ENST00000498254 STATHP02808 62 aa1.17□□□□□ -2.22
CALD1-224ENST00000498254 KLK9Q2XQG4 91 aa1.17□□□□□ -2.22
CALD1-224ENST00000498254 CRYBG3Q68DQ2 2970 aa1.17□□□□□ -2.22
CALD1-224ENST00000498254 EP300Q09472 2414 aaPredicted RBP1.17□□□□□ -2.22
CALD1-224ENST00000498254 SPTA1P02549 2419 aa1.16□□□□□ -2.22
CALD1-224ENST00000498254 K7EIL1 84 aa1.16□□□□□ -2.22
CALD1-224ENST00000498254 IGF2RP11717 2491 aa1.16□□□□□ -2.22
CALD1-224ENST00000498254 USF3Q68DE3 2245 aa1.16□□□□□ -2.22
CALD1-224ENST00000498254 MACF1Q9UPN3 7388 aaKnown RBP1.15□□□□□ -2.23
CALD1-224ENST00000498254 SPINK1P00995 79 aa1.15□□□□□ -2.23
CALD1-224ENST00000498254 VPS13AQ96RL7 3174 aa1.15□□□□□ -2.23
CALD1-224ENST00000498254 PLCE1Q9P212 2302 aa1.14□□□□□ -2.23
CALD1-224ENST00000498254 H3BUA1 57 aa1.14□□□□□ -2.23
CALD1-224ENST00000498254 APELAP0DMC3 54 aa1.14□□□□□ -2.23
CALD1-224ENST00000498254 S4R3F8 94 aa1.14□□□□□ -2.23
CALD1-224ENST00000498254 CELSR2Q9HCU4 2923 aa1.14□□□□□ -2.23
CALD1-224ENST00000498254 SYNE2Q8WXH0 6885 aaKnown RBP1.14□□□□□ -2.23
CALD1-224ENST00000498254 PRRC2CQ9Y520 2896 aaKnown RBP1.14□□□□□ -2.23
CALD1-224ENST00000498254 RIF1Q5UIP0 2472 aaKnown RBP1.13□□□□□ -2.23
CALD1-224ENST00000498254 MXRA5Q9NR99 2828 aa1.13□□□□□ -2.23
CALD1-224ENST00000498254 FAM186AA6NE01 2351 aa1.13□□□□□ -2.23
CALD1-224ENST00000498254 HERC1Q15751 4861 aa1.13□□□□□ -2.23
CALD1-224ENST00000498254 TLN2Q9Y4G6 2542 aa1.13□□□□□ -2.23
CALD1-224ENST00000498254 SPRR1BP22528 89 aa1.13□□□□□ -2.23
CALD1-224ENST00000498254 CNTRLQ7Z7A1 2325 aa1.12□□□□□ -2.23
CALD1-224ENST00000498254 NIPBLQ6KC79 2804 aaeCLIP1.12□□□□□ -2.23
CALD1-224ENST00000498254 MEGF8Q7Z7M0 2845 aa1.12□□□□□ -2.23
CALD1-224ENST00000498254 LRBAP50851 2863 aa1.12□□□□□ -2.23
CALD1-224ENST00000498254 CDH23Q9H251 3354 aa1.12□□□□□ -2.23
CALD1-224ENST00000498254 FRYQ5TBA9 3013 aa1.12□□□□□ -2.23
CALD1-224ENST00000498254 PRUNE2Q8WUY3 3088 aa1.12□□□□□ -2.23
CALD1-224ENST00000498254 SMG1Q96Q15 3661 aaKnown RBP1.12□□□□□ -2.23
CALD1-224ENST00000498254 FRYLO94915 3013 aa1.12□□□□□ -2.23
CALD1-224ENST00000498254 MGAM2Q2M2H8 2515 aa1.12□□□□□ -2.23
CALD1-224ENST00000498254 OTOGQ6ZRI0 2925 aa1.12□□□□□ -2.23
CALD1-224ENST00000498254 NEBP20929 6669 aa1.12□□□□□ -2.23
CALD1-224ENST00000498254 A0A0D9SG42 100 aa1.11□□□□□ -2.23
CALD1-224ENST00000498254 DEFB109BQ30KR1 87 aa1.11□□□□□ -2.23
CALD1-224ENST00000498254 WNK2Q9Y3S1 2297 aa1.11□□□□□ -2.23
CALD1-224ENST00000498254 TENM2Q9NT68 2774 aa1.11□□□□□ -2.23
CALD1-224ENST00000498254 TENM3Q9P273 2699 aa1.11□□□□□ -2.23
CALD1-224ENST00000498254 PTPRZ1P23471 2315 aaPredicted RBP1.1□□□□□ -2.23
CALD1-224ENST00000498254 KRTAP20-1Q3LI63 56 aa1.1□□□□□ -2.23
CALD1-224ENST00000498254 Q5VSD8 79 aa1.1□□□□□ -2.23
CALD1-224ENST00000498254 WDR87Q6ZQQ6 2873 aa1.1□□□□□ -2.23
CALD1-224ENST00000498254 DNAH14Q0VDD8 3507 aa1.1□□□□□ -2.23
CALD1-224ENST00000498254 CHD7Q9P2D1 2997 aa1.1□□□□□ -2.23
CALD1-224ENST00000498254 NF1P21359 2839 aa1.1□□□□□ -2.23
CALD1-224ENST00000498254 AHNAK2Q8IVF2 5795 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms