RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 A0A0U1RQV1 116 aa10.59□□□□□ -0.71
HLA-B-255ENST00000498007 J3KT08 172 aa10.58□□□□□ -0.72
HLA-B-255ENST00000498007 LINC00313P59037 77 aa10.57□□□□□ -0.72
HLA-B-255ENST00000498007 Q75L30 129 aa10.57□□□□□ -0.72
HLA-B-255ENST00000498007 A0A1B0GVX0 72 aa10.55□□□□□ -0.72
HLA-B-255ENST00000498007 NREPQ16612 68 aa10.55□□□□□ -0.72
HLA-B-255ENST00000498007 NOTCH2NLQ7Z3S9 236 aa10.54□□□□□ -0.72
HLA-B-255ENST00000498007 FAT4Q6V0I7 4981 aa10.54□□□□□ -0.72
HLA-B-255ENST00000498007 C20orf166-AS1Q96NR2 134 aa10.52□□□□□ -0.73
HLA-B-255ENST00000498007 F8W1H4 67 aa10.51□□□□□ -0.73
HLA-B-255ENST00000498007 ATP11AUNQ6ZP68 121 aa10.51□□□□□ -0.73
HLA-B-255ENST00000498007 A8MUU9 505 aa10.5□□□□□ -0.73
HLA-B-255ENST00000498007 C8orf87E5RJ46 101 aa10.5□□□□□ -0.73
HLA-B-255ENST00000498007 K7ERU9 68 aa10.5□□□□□ -0.73
HLA-B-255ENST00000498007 NDUFB1O75438 58 aa10.5□□□□□ -0.73
HLA-B-255ENST00000498007 KRTAP16-1A8MUX0 517 aa10.49□□□□□ -0.73
HLA-B-255ENST00000498007 A8MWP4 228 aa10.48□□□□□ -0.73
HLA-B-255ENST00000498007 IGKV3D-7A0A0C4DH55 119 aa10.44□□□□□ -0.74
HLA-B-255ENST00000498007 ETDBQ3ZM63 59 aa10.44□□□□□ -0.74
HLA-B-255ENST00000498007 Q6ZVQ6 151 aa10.42□□□□□ -0.74
HLA-B-255ENST00000498007 J3QR89 54 aa10.41□□□□□ -0.74
HLA-B-255ENST00000498007 BPY2O14599 106 aa10.4□□□□□ -0.74
HLA-B-255ENST00000498007 C8orf17Q9NRJ1 99 aa10.4□□□□□ -0.74
HLA-B-255ENST00000498007 PRR15Q8IV56 129 aa10.39□□□□□ -0.75
HLA-B-255ENST00000498007 K7EQZ3 153 aa10.37□□□□□ -0.75
HLA-B-255ENST00000498007 LINC00846Q9NV44 126 aa10.37□□□□□ -0.75
HLA-B-255ENST00000498007 UBL5Q9BZL1 73 aa10.35□□□□□ -0.75
HLA-B-255ENST00000498007 MMP24-AS1A0A0U1RRL7 71 aa10.31□□□□□ -0.76
HLA-B-255ENST00000498007 Q8N9L7 120 aa10.3□□□□□ -0.76
HLA-B-255ENST00000498007 KRTAP19-2Q3LHN2 52 aa10.28□□□□□ -0.76
HLA-B-255ENST00000498007 LCE2AQ5TA79 106 aaPredicted RBP10.28□□□□□ -0.76
HLA-B-255ENST00000498007 Q8N9P0 234 aaPredicted RBP10.27□□□□□ -0.77
HLA-B-255ENST00000498007 TMEM254Q8TBM7 123 aa10.26□□□□□ -0.77
HLA-B-255ENST00000498007 hDV103S1A0JD37 113 aa10.25□□□□□ -0.77
HLA-B-255ENST00000498007 LCE2CQ5TA81 110 aa10.25□□□□□ -0.77
HLA-B-255ENST00000498007 ZCCHC13Q8WW36 166 aaKnown RBP10.24□□□□□ -0.77
HLA-B-255ENST00000498007 MRPL34Q9BQ48 92 aaKnown RBP10.24□□□□□ -0.77
HLA-B-255ENST00000498007 COX6B2Q6YFQ2 88 aa10.23□□□□□ -0.77
HLA-B-255ENST00000498007 WFDC13Q8IUB5 93 aa10.21□□□□□ -0.77
HLA-B-255ENST00000498007 NDUFS5O43920 106 aa10.2□□□□□ -0.78
HLA-B-255ENST00000498007 CASC2Q6XLA1 102 aa10.17□□□□□ -0.78
HLA-B-255ENST00000498007 ACYP1P07311 99 aa10.15□□□□□ -0.78
HLA-B-255ENST00000498007 CXCL6P80162 114 aa10.14□□□□□ -0.79
HLA-B-255ENST00000498007 FAM240AA0A1B0GVK7 77 aa10.13□□□□□ -0.79
HLA-B-255ENST00000498007 MT1HP80294 61 aa10.13□□□□□ -0.79
HLA-B-255ENST00000498007 HCG22E2RYF7 251 aa10.12□□□□□ -0.79
HLA-B-255ENST00000498007 HRES1P13985 223 aa10.08□□□□□ -0.8
HLA-B-255ENST00000498007 SPINK7P58062 85 aa10.08□□□□□ -0.8
HLA-B-255ENST00000498007 FLGP20930 4061 aaPredicted RBP10.07□□□□□ -0.8
HLA-B-255ENST00000498007 FAM236DA0A1B0GTK5 79 aa10.05□□□□□ -0.8
HLA-B-255ENST00000498007 FAM236CP0DP71 79 aa10.05□□□□□ -0.8
HLA-B-255ENST00000498007 RBM12B-AS1Q9P1G2 102 aa10.04□□□□□ -0.8
HLA-B-255ENST00000498007 SCGB1A1P11684 91 aa10.03□□□□□ -0.8
HLA-B-255ENST00000498007 PCP4P48539 62 aa10.03□□□□□ -0.8
HLA-B-255ENST00000498007 M0R2T5 61 aa10.02□□□□□ -0.81
HLA-B-255ENST00000498007 ATP5EP2Q5VTU8 51 aa10.01□□□□□ -0.81
HLA-B-255ENST00000498007 Q5W150 140 aa10□□□□□ -0.81
HLA-B-255ENST00000498007 MPLKIPQ8TAP9 179 aa10□□□□□ -0.81
HLA-B-255ENST00000498007 IGKV2D-30A0A075B6S6 120 aa9.95□□□□□ -0.82
HLA-B-255ENST00000498007 IGKV2-30P06310 120 aa9.95□□□□□ -0.82
HLA-B-255ENST00000498007 HIST1H4AP62805 103 aaKnown RBP9.95□□□□□ -0.82
HLA-B-255ENST00000498007 LINC00643Q86TS7 51 aa9.94□□□□□ -0.82
HLA-B-255ENST00000498007 MT-ATP8P03928 68 aa9.91□□□□□ -0.82
HLA-B-255ENST00000498007 C7orf65Q6ZTY9 151 aa9.91□□□□□ -0.82
HLA-B-255ENST00000498007 KRTAP10-6P60371 365 aaPredicted RBP9.88□□□□□ -0.83
HLA-B-255ENST00000498007 TP53AIP1Q9HCN2 124 aa9.88□□□□□ -0.83
HLA-B-255ENST00000498007 A0A087WVE0 104 aa9.85□□□□□ -0.83
HLA-B-255ENST00000498007 LORP23490 312 aaPredicted RBP9.84□□□□□ -0.83
HLA-B-255ENST00000498007 IMUPQ9GZP8 106 aa9.78□□□□□ -0.84
HLA-B-255ENST00000498007 KRTAP9-2Q9BYQ4 174 aa9.75□□□□□ -0.85
HLA-B-255ENST00000498007 TRAV22A0A0B4J277 110 aa9.73□□□□□ -0.85
HLA-B-255ENST00000498007 C4orf26Q17RF5 130 aa9.72□□□□□ -0.85
HLA-B-255ENST00000498007 ANAPC13Q9BS18 74 aa9.69□□□□□ -0.86
HLA-B-255ENST00000498007 UQCRQO14949 82 aa9.68□□□□□ -0.86
HLA-B-255ENST00000498007 H1FX-AS1Q4G0G2 97 aa9.68□□□□□ -0.86
HLA-B-255ENST00000498007 H0Y9P7 68 aa9.65□□□□□ -0.86
HLA-B-255ENST00000498007 LOC101927531A0A1B0GV80 90 aa9.64□□□□□ -0.87
HLA-B-255ENST00000498007 LCE2DQ5TA82 110 aaPredicted RBP9.62□□□□□ -0.87
HLA-B-255ENST00000498007 CYP4F30PQ9H0H9 118 aa9.62□□□□□ -0.87
HLA-B-255ENST00000498007 FAM236AA0A1B0GUQ0 79 aa9.61□□□□□ -0.87
HLA-B-255ENST00000498007 FAM236BA0A1B0GV22 79 aa9.61□□□□□ -0.87
HLA-B-255ENST00000498007 ATOX1O00244 68 aa9.61□□□□□ -0.87
HLA-B-255ENST00000498007 KRTAP9-8Q9BYQ0 159 aa9.61□□□□□ -0.87
HLA-B-255ENST00000498007 C1orf64Q8NEQ6 169 aa9.58□□□□□ -0.88
HLA-B-255ENST00000498007 OCR1Q9BZK8 76 aa9.58□□□□□ -0.88
HLA-B-255ENST00000498007 MT2AP02795 61 aa9.54□□□□□ -0.88
HLA-B-255ENST00000498007 KRTAP3-1Q9BYR8 98 aa9.54□□□□□ -0.88
HLA-B-255ENST00000498007 MP68P56378 58 aa9.52□□□□□ -0.89
HLA-B-255ENST00000498007 LINC00208Q96KT6 92 aa9.52□□□□□ -0.89
HLA-B-255ENST00000498007 MT1FP04733 61 aa9.47□□□□□ -0.89
HLA-B-255ENST00000498007 S4R3F8 94 aa9.47□□□□□ -0.89
HLA-B-255ENST00000498007 C5orf47Q569G3 176 aa9.45□□□□□ -0.9
HLA-B-255ENST00000498007 KRTAP10-10P60014 251 aa9.44□□□□□ -0.9
HLA-B-255ENST00000498007 KLKP1Q107X0 134 aa9.41□□□□□ -0.9
HLA-B-255ENST00000498007 CCDC179H3BU77 68 aa9.4□□□□□ -0.9
HLA-B-255ENST00000498007 LCA10Q71F78 164 aa9.4□□□□□ -0.9
HLA-B-255ENST00000498007 FSIP2Q5CZC0 6907 aa9.39□□□□□ -0.91
HLA-B-255ENST00000498007 COX7CP15954 63 aa9.39□□□□□ -0.91
HLA-B-255ENST00000498007 SMIM20Q8N5G0 67 aa9.39□□□□□ -0.91
HLA-B-255ENST00000498007 SERP2Q8N6R1 65 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms