RNA–Protein interactions for RNA: ENST00000497622.1

FAM3C-205, Transcript of family with sequence similarity 3 member C, humanhuman

TSL 2

Gene FAM3C, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-205ENST00000497622 FRYLO94915 3013 aa1.43□□□□□ -2.18
FAM3C-205ENST00000497622 PRRC2CQ9Y520 2896 aaKnown RBP1.43□□□□□ -2.18
FAM3C-205ENST00000497622 CFAP47Q6ZTR5 3102 aa1.43□□□□□ -2.18
FAM3C-205ENST00000497622 RANBP2P49792 3224 aaKnown RBP1.43□□□□□ -2.18
FAM3C-205ENST00000497622 LINC01556Q5JQF7 62 aa1.43□□□□□ -2.18
FAM3C-205ENST00000497622 SPINK6Q6UWN8 80 aa1.43□□□□□ -2.18
FAM3C-205ENST00000497622 KRTAP12-1P59990 96 aa1.42□□□□□ -2.18
FAM3C-205ENST00000497622 KRTAP13-4Q3LI77 160 aa1.42□□□□□ -2.18
FAM3C-205ENST00000497622 Q5VSD8 79 aa1.42□□□□□ -2.18
FAM3C-205ENST00000497622 DEFB124Q8NES8 71 aa1.42□□□□□ -2.18
FAM3C-205ENST00000497622 REV3LO60673 3130 aa1.42□□□□□ -2.18
FAM3C-205ENST00000497622 BAHCC1Q9P281 2608 aa1.42□□□□□ -2.18
FAM3C-205ENST00000497622 SPTBN5Q9NRC6 3674 aaKnown RBP1.42□□□□□ -2.18
FAM3C-205ENST00000497622 CHD9Q3L8U1 2897 aa1.41□□□□□ -2.18
FAM3C-205ENST00000497622 TRANK1O15050 2925 aa1.41□□□□□ -2.18
FAM3C-205ENST00000497622 SPART-AS1P0CW21 52 aa1.41□□□□□ -2.18
FAM3C-205ENST00000497622 TRIOO75962 3097 aa1.41□□□□□ -2.18
FAM3C-205ENST00000497622 BOD1L1Q8NFC6 3051 aa1.41□□□□□ -2.18
FAM3C-205ENST00000497622 NBASA2RRP1 2371 aa1.41□□□□□ -2.18
FAM3C-205ENST00000497622 MKI67P46013 3256 aaKnown RBP1.41□□□□□ -2.18
FAM3C-205ENST00000497622 M0QZ58 72 aa1.4□□□□□ -2.19
FAM3C-205ENST00000497622 CEP290O15078 2479 aa1.4□□□□□ -2.19
FAM3C-205ENST00000497622 F8P00451 2351 aa1.39□□□□□ -2.19
FAM3C-205ENST00000497622 AKAP9Q99996 3911 aa1.39□□□□□ -2.19
FAM3C-205ENST00000497622 FRYQ5TBA9 3013 aa1.39□□□□□ -2.19
FAM3C-205ENST00000497622 CRYBG3Q68DQ2 2970 aa1.38□□□□□ -2.19
FAM3C-205ENST00000497622 ANKHD1Q8IWZ3 2542 aaKnown RBP1.38□□□□□ -2.19
FAM3C-205ENST00000497622 CELSR1Q9NYQ6 3014 aa1.38□□□□□ -2.19
FAM3C-205ENST00000497622 C5orf42Q9H799 3197 aa1.38□□□□□ -2.19
FAM3C-205ENST00000497622 NAV2Q8IVL1 2488 aa1.38□□□□□ -2.19
FAM3C-205ENST00000497622 DMXL1Q9Y485 3027 aa1.38□□□□□ -2.19
FAM3C-205ENST00000497622 WDFY4Q6ZS81 3184 aa1.37□□□□□ -2.19
FAM3C-205ENST00000497622 NBPF19A0A087WUL8 3843 aa1.37□□□□□ -2.19
FAM3C-205ENST00000497622 MEGF8Q7Z7M0 2845 aa1.37□□□□□ -2.19
FAM3C-205ENST00000497622 HTTP42858 3142 aa1.37□□□□□ -2.19
FAM3C-205ENST00000497622 TTC28Q96AY4 2481 aa1.37□□□□□ -2.19
FAM3C-205ENST00000497622 VPS13DQ5THJ4 4388 aa1.36□□□□□ -2.19
FAM3C-205ENST00000497622 APCP25054 2843 aa1.36□□□□□ -2.19
FAM3C-205ENST00000497622 DNAH12Q6ZR08 3092 aa1.36□□□□□ -2.19
FAM3C-205ENST00000497622 SZT2Q5T011 3432 aa1.36□□□□□ -2.19
FAM3C-205ENST00000497622 RIF1Q5UIP0 2472 aaKnown RBP1.35□□□□□ -2.19
FAM3C-205ENST00000497622 PKD1L2Q7Z442 2459 aa1.35□□□□□ -2.19
FAM3C-205ENST00000497622 DMDP11532 3685 aa1.35□□□□□ -2.19
FAM3C-205ENST00000497622 HTN3P15516 51 aa1.35□□□□□ -2.19
FAM3C-205ENST00000497622 LAMA2P24043 3122 aaKnown RBP1.35□□□□□ -2.19
FAM3C-205ENST00000497622 SONP18583 2426 aaKnown RBP1.35□□□□□ -2.19
FAM3C-205ENST00000497622 HIVEP3Q5T1R4 2406 aa1.35□□□□□ -2.19
FAM3C-205ENST00000497622 PTPN13Q12923 2485 aa1.34□□□□□ -2.19
FAM3C-205ENST00000497622 ABCA12Q86UK0 2595 aa1.34□□□□□ -2.19
FAM3C-205ENST00000497622 LAMA1P25391 3075 aa1.34□□□□□ -2.2
FAM3C-205ENST00000497622 TACC2O95359 2948 aa1.34□□□□□ -2.2
FAM3C-205ENST00000497622 UTP20O75691 2785 aaKnown RBP1.34□□□□□ -2.2
FAM3C-205ENST00000497622 COL12A1Q99715 3063 aa1.34□□□□□ -2.2
FAM3C-205ENST00000497622 SETD2Q9BYW2 2564 aaPredicted RBP1.33□□□□□ -2.2
FAM3C-205ENST00000497622 UNC80Q8N2C7 3258 aa1.33□□□□□ -2.2
FAM3C-205ENST00000497622 NF1P21359 2839 aa1.33□□□□□ -2.2
FAM3C-205ENST00000497622 SPTAN1Q13813 2472 aaKnown RBP1.33□□□□□ -2.2
FAM3C-205ENST00000497622 DMBT1Q9UGM3 2413 aaPredicted RBP1.32□□□□□ -2.2
FAM3C-205ENST00000497622 TEX15Q9BXT5 2789 aa1.32□□□□□ -2.2
FAM3C-205ENST00000497622 TLN1Q9Y490 2541 aaKnown RBP1.32□□□□□ -2.2
FAM3C-205ENST00000497622 ZFHX4Q86UP3 3567 aa1.32□□□□□ -2.2
FAM3C-205ENST00000497622 EP400Q96L91 3159 aa1.32□□□□□ -2.2
FAM3C-205ENST00000497622 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
FAM3C-205ENST00000497622 J3QKU1 62 aa1.31□□□□□ -2.2
FAM3C-205ENST00000497622 DEFB135Q30KP9 77 aa1.31□□□□□ -2.2
FAM3C-205ENST00000497622 DCHS1Q96JQ0 3298 aa1.31□□□□□ -2.2
FAM3C-205ENST00000497622 CENPEQ02224 2701 aa1.31□□□□□ -2.2
FAM3C-205ENST00000497622 USP34Q70CQ2 3546 aa1.3□□□□□ -2.2
FAM3C-205ENST00000497622 SPEGQ15772 3267 aa1.3□□□□□ -2.2
FAM3C-205ENST00000497622 DEFB4AO15263 64 aa1.3□□□□□ -2.2
FAM3C-205ENST00000497622 DOPEY1Q5JWR5 2465 aa1.3□□□□□ -2.2
FAM3C-205ENST00000497622 ATMQ13315 3056 aa1.3□□□□□ -2.2
FAM3C-205ENST00000497622 LRRK2Q5S007 2527 aa1.3□□□□□ -2.2
FAM3C-205ENST00000497622 USP9XQ93008 2570 aaPredicted RBP1.3□□□□□ -2.2
FAM3C-205ENST00000497622 DMXL2Q8TDJ6 3036 aa1.29□□□□□ -2.2
FAM3C-205ENST00000497622 ITPR3Q14573 2671 aa1.29□□□□□ -2.2
FAM3C-205ENST00000497622 DCHS2Q6V1P9 2916 aa1.29□□□□□ -2.2
FAM3C-205ENST00000497622 DNAH11Q96DT5 4516 aa1.29□□□□□ -2.2
FAM3C-205ENST00000497622 CELSR3Q9NYQ7 3312 aa1.28□□□□□ -2.2
FAM3C-205ENST00000497622 TLN2Q9Y4G6 2542 aa1.28□□□□□ -2.2
FAM3C-205ENST00000497622 FREM2Q5SZK8 3169 aa1.28□□□□□ -2.2
FAM3C-205ENST00000497622 RPS29P62273 56 aaKnown RBP1.28□□□□□ -2.2
FAM3C-205ENST00000497622 ZNF292O60281 2723 aa1.28□□□□□ -2.2
FAM3C-205ENST00000497622 CFAP46Q8IYW2 2715 aa1.28□□□□□ -2.2
FAM3C-205ENST00000497622 XIRP2A4UGR9 3374 aa1.28□□□□□ -2.21
FAM3C-205ENST00000497622 USP9YO00507 2555 aaPredicted RBP1.27□□□□□ -2.21
FAM3C-205ENST00000497622 LAMA5O15230 3695 aa1.26□□□□□ -2.21
FAM3C-205ENST00000497622 SPENQ96T58 3664 aaKnown RBP1.26□□□□□ -2.21
FAM3C-205ENST00000497622 SETXQ7Z333 2677 aaKnown RBP1.26□□□□□ -2.21
FAM3C-205ENST00000497622 HELZ2Q9BYK8 2649 aaKnown RBP1.26□□□□□ -2.21
FAM3C-205ENST00000497622 CHD8Q9HCK8 2581 aa1.26□□□□□ -2.21
FAM3C-205ENST00000497622 NIPBLQ6KC79 2804 aaeCLIP1.25□□□□□ -2.21
FAM3C-205ENST00000497622 FRAS1Q86XX4 4008 aa1.25□□□□□ -2.21
FAM3C-205ENST00000497622 LYSTQ99698 3801 aa1.25□□□□□ -2.21
FAM3C-205ENST00000497622 PIEZO1Q92508 2521 aa1.25□□□□□ -2.21
FAM3C-205ENST00000497622 DNAH14Q0VDD8 3507 aa1.25□□□□□ -2.21
FAM3C-205ENST00000497622 RELNP78509 3460 aa1.25□□□□□ -2.21
FAM3C-205ENST00000497622 TNP1P09430 55 aa1.25□□□□□ -2.21
FAM3C-205ENST00000497622 CSMD1Q96PZ7 3565 aa1.25□□□□□ -2.21
FAM3C-205ENST00000497622 COL7A1Q02388 2944 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms