RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 LRP1BQ9NZR2 4599 aa9.67□□□□□ -0.86
PCBP4-216ENST00000497390 A0A1B0GVX0 72 aa9.66□□□□□ -0.86
PCBP4-216ENST00000497390 SPANXA2-OT1Q8N9U9 137 aa9.66□□□□□ -0.86
PCBP4-216ENST00000497390 H3BPC8 53 aa9.66□□□□□ -0.86
PCBP4-216ENST00000497390 ZNF706Q9Y5V0 76 aaPredicted RBP9.62□□□□□ -0.87
PCBP4-216ENST00000497390 COA5Q86WW8 74 aa9.61□□□□□ -0.87
PCBP4-216ENST00000497390 Q8N9P0 234 aaPredicted RBP9.61□□□□□ -0.87
PCBP4-216ENST00000497390 CIRBP-AS1Q8TBR5 109 aa9.61□□□□□ -0.87
PCBP4-216ENST00000497390 Q5VV11 94 aa9.6□□□□□ -0.87
PCBP4-216ENST00000497390 PKD1P98161 4303 aa9.6□□□□□ -0.87
PCBP4-216ENST00000497390 IGLV7-46A0A075B6I9 117 aa9.6□□□□□ -0.87
PCBP4-216ENST00000497390 KRTAP10-2P60368 255 aa9.59□□□□□ -0.87
PCBP4-216ENST00000497390 LY6G6CO95867 125 aa9.58□□□□□ -0.88
PCBP4-216ENST00000497390 IGLV7-43P04211 117 aa9.58□□□□□ -0.88
PCBP4-216ENST00000497390 Q5W150 140 aa9.58□□□□□ -0.88
PCBP4-216ENST00000497390 MRPL34Q9BQ48 92 aaKnown RBP9.58□□□□□ -0.88
PCBP4-216ENST00000497390 C1orf134Q5TEV5 83 aa9.58□□□□□ -0.88
PCBP4-216ENST00000497390 CDK2AP2O75956 126 aa9.57□□□□□ -0.88
PCBP4-216ENST00000497390 FAT2Q9NYQ8 4349 aa9.56□□□□□ -0.88
PCBP4-216ENST00000497390 TP53AIP1Q9HCN2 124 aa9.56□□□□□ -0.88
PCBP4-216ENST00000497390 VPS13BQ7Z7G8 4022 aa9.55□□□□□ -0.88
PCBP4-216ENST00000497390 PRR15LQ9BU68 103 aa9.53□□□□□ -0.88
PCBP4-216ENST00000497390 C1orf195Q5TG92 126 aa9.5□□□□□ -0.89
PCBP4-216ENST00000497390 CHKB-CPT1BH3BT56 60 aa9.48□□□□□ -0.89
PCBP4-216ENST00000497390 SPAG11AQ6PDA7 123 aa9.48□□□□□ -0.89
PCBP4-216ENST00000497390 RETNLBQ9BQ08 111 aa9.48□□□□□ -0.89
PCBP4-216ENST00000497390 HRES1P13985 223 aa9.48□□□□□ -0.89
PCBP4-216ENST00000497390 KRTAP13-3Q3SY46 172 aa9.47□□□□□ -0.89
PCBP4-216ENST00000497390 V9GYY9 64 aa9.46□□□□□ -0.89
PCBP4-216ENST00000497390 PKHD1P08F94 4074 aa9.46□□□□□ -0.9
PCBP4-216ENST00000497390 KRTAP13-2Q52LG2 175 aa9.45□□□□□ -0.9
PCBP4-216ENST00000497390 LIMD2Q9BT23 127 aa9.44□□□□□ -0.9
PCBP4-216ENST00000497390 KRTAP10-1P60331 282 aa9.43□□□□□ -0.9
PCBP4-216ENST00000497390 LCA10Q71F78 164 aa9.4□□□□□ -0.9
PCBP4-216ENST00000497390 PRR26Q8N8Z3 221 aa9.4□□□□□ -0.91
PCBP4-216ENST00000497390 SSBP3-AS1Q7Z2R9 100 aa9.36□□□□□ -0.91
PCBP4-216ENST00000497390 LOC101927531A0A1B0GV80 90 aa9.36□□□□□ -0.91
PCBP4-216ENST00000497390 A6NED7 52 aa9.35□□□□□ -0.91
PCBP4-216ENST00000497390 Q75L30 129 aa9.35□□□□□ -0.91
PCBP4-216ENST00000497390 LINC00313P59037 77 aa9.33□□□□□ -0.92
PCBP4-216ENST00000497390 KRTAP1-4P0C5Y4 121 aa9.32□□□□□ -0.92
PCBP4-216ENST00000497390 SEC61GP60059 68 aa9.32□□□□□ -0.92
PCBP4-216ENST00000497390 SPTSSBQ8NFR3 76 aa9.32□□□□□ -0.92
PCBP4-216ENST00000497390 LINC01558Q9Y6Z2 57 aa9.32□□□□□ -0.92
PCBP4-216ENST00000497390 Q6ZSA8 131 aa9.31□□□□□ -0.92
PCBP4-216ENST00000497390 SPINK7P58062 85 aa9.31□□□□□ -0.92
PCBP4-216ENST00000497390 PMAIP1Q13794 54 aa9.29□□□□□ -0.92
PCBP4-216ENST00000497390 KRTAP16-1A8MUX0 517 aa9.27□□□□□ -0.92
PCBP4-216ENST00000497390 C8orf87E5RJ46 101 aa9.27□□□□□ -0.93
PCBP4-216ENST00000497390 SACSQ9NZJ4 4579 aa9.25□□□□□ -0.93
PCBP4-216ENST00000497390 FAT1Q14517 4588 aa9.23□□□□□ -0.93
PCBP4-216ENST00000497390 FAM229AH3BQW9 127 aa9.2□□□□□ -0.94
PCBP4-216ENST00000497390 IGKV2-30P06310 120 aa9.2□□□□□ -0.94
PCBP4-216ENST00000497390 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
PCBP4-216ENST00000497390 PLA2G1BP04054 148 aaKnown RBP9.19□□□□□ -0.94
PCBP4-216ENST00000497390 ACYP2P14621 99 aa9.19□□□□□ -0.94
PCBP4-216ENST00000497390 IGKV2D-30A0A075B6S6 120 aa9.19□□□□□ -0.94
PCBP4-216ENST00000497390 CDC42SE1Q9NRR8 79 aa9.19□□□□□ -0.94
PCBP4-216ENST00000497390 DYNC1H1Q14204 4646 aaKnown RBP9.18□□□□□ -0.94
PCBP4-216ENST00000497390 KRTAP21-3Q3LHN1 58 aa9.16□□□□□ -0.94
PCBP4-216ENST00000497390 ATP11AUNQ6ZP68 121 aa9.13□□□□□ -0.95
PCBP4-216ENST00000497390 TYMSOSQ8TAI1 123 aa9.13□□□□□ -0.95
PCBP4-216ENST00000497390 A6NN06 94 aa9.11□□□□□ -0.95
PCBP4-216ENST00000497390 SMR3BP02814 79 aaPredicted RBP9.1□□□□□ -0.95
PCBP4-216ENST00000497390 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
PCBP4-216ENST00000497390 APOBP04114 4563 aaKnown RBP9.05□□□□□ -0.96
PCBP4-216ENST00000497390 C7orf65Q6ZTY9 151 aa9.03□□□□□ -0.96
PCBP4-216ENST00000497390 KTN1-AS1Q86SY8 53 aa9.02□□□□□ -0.97
PCBP4-216ENST00000497390 Q8N1X5 172 aa9.02□□□□□ -0.97
PCBP4-216ENST00000497390 SPINK1P00995 79 aa9.02□□□□□ -0.97
PCBP4-216ENST00000497390 A0A1B0GU69 56 aa9.01□□□□□ -0.97
PCBP4-216ENST00000497390 PKHD1L1Q86WI1 4243 aa8.99□□□□□ -0.97
PCBP4-216ENST00000497390 C9orf92A6NGG3 77 aa8.99□□□□□ -0.97
PCBP4-216ENST00000497390 LINC00304Q8N9R0 145 aa8.99□□□□□ -0.97
PCBP4-216ENST00000497390 KMT2CQ8NEZ4 4911 aaKnown RBP8.95□□□□□ -0.98
PCBP4-216ENST00000497390 LRP1Q07954 4544 aaKnown RBP8.92□□□□□ -0.98
PCBP4-216ENST00000497390 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
PCBP4-216ENST00000497390 ADM2Q7Z4H4 148 aa8.88□□□□□ -0.99
PCBP4-216ENST00000497390 KRTAP10-4P60372 401 aaPredicted RBP8.87□□□□□ -0.99
PCBP4-216ENST00000497390 RYR2Q92736 4967 aa8.86□□□□□ -0.99
PCBP4-216ENST00000497390 PRAC1Q96KF2 57 aa8.85□□□□□ -0.99
PCBP4-216ENST00000497390 SPATA8Q6RVD6 105 aa8.84□□□□□ -0.99
PCBP4-216ENST00000497390 MIR22HGQ0VDD5 57 aa8.83□□□□□ -1
PCBP4-216ENST00000497390 KRTAP3-1Q9BYR8 98 aa8.82□□□□□ -1
PCBP4-216ENST00000497390 FLG2Q5D862 2391 aaPredicted RBP8.81□□□□□ -1
PCBP4-216ENST00000497390 A0A1B0GVY2 172 aa8.81□□□□□ -1
PCBP4-216ENST00000497390 UQCR11O14957 56 aa8.8□□□□□ -1
PCBP4-216ENST00000497390 MYCBP2O75592 4640 aa8.79□□□□□ -1
PCBP4-216ENST00000497390 RPS29P62273 56 aaKnown RBP8.79□□□□□ -1
PCBP4-216ENST00000497390 HSPG2P98160 4391 aa8.78□□□□□ -1
PCBP4-216ENST00000497390 FAT3Q8TDW7 4589 aa8.77□□□□□ -1.01
PCBP4-216ENST00000497390 A8MUU9 505 aa8.76□□□□□ -1.01
PCBP4-216ENST00000497390 C20orf166-AS1Q96NR2 134 aa8.76□□□□□ -1.01
PCBP4-216ENST00000497390 TNXBP22105 4242 aa8.75□□□□□ -1.01
PCBP4-216ENST00000497390 DMBT1Q9UGM3 2413 aaPredicted RBP8.67□□□□□ -1.02
PCBP4-216ENST00000497390 H0YAA0 97 aa8.65□□□□□ -1.02
PCBP4-216ENST00000497390 RYR3Q15413 4870 aa8.62□□□□□ -1.03
PCBP4-216ENST00000497390 LPAP08519 4548 aa8.56□□□□□ -1.04
PCBP4-216ENST00000497390 KRTAP17-1Q9BYP8 105 aa8.56□□□□□ -1.04
PCBP4-216ENST00000497390 A0A1B0GU33 70 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms