RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 DSCR8Q96T75 97 aa4.17□□□□□ -1.74
CDHR3-214ENST00000496633 A0A1B0GW54 56 aa4.16□□□□□ -1.74
CDHR3-214ENST00000496633 RBM3P98179 157 aaKnown RBP4.16□□□□□ -1.74
CDHR3-214ENST00000496633 MUC2Q02817 5179 aa4.16□□□□□ -1.74
CDHR3-214ENST00000496633 A0A087WSZ3 146 aa4.15□□□□□ -1.75
CDHR3-214ENST00000496633 A0A0G2JQZ4 141 aa4.15□□□□□ -1.75
CDHR3-214ENST00000496633 C9orf92A6NGG3 77 aa4.15□□□□□ -1.75
CDHR3-214ENST00000496633 JMJD7-PLA2G4BH0Y9G9 81 aa4.15□□□□□ -1.75
CDHR3-214ENST00000496633 PDE6GP18545 87 aa4.15□□□□□ -1.75
CDHR3-214ENST00000496633 LINC00643Q86TS7 51 aa4.15□□□□□ -1.75
CDHR3-214ENST00000496633 OBSCN-AS1Q96MR7 158 aa4.15□□□□□ -1.75
CDHR3-214ENST00000496633 CCKP06307 115 aa4.14□□□□□ -1.75
CDHR3-214ENST00000496633 ANAPC13Q9BS18 74 aa4.14□□□□□ -1.75
CDHR3-214ENST00000496633 MUC17Q685J3 4493 aa4.13□□□□□ -1.75
CDHR3-214ENST00000496633 BAALC-AS2P0C853 105 aa4.13□□□□□ -1.75
CDHR3-214ENST00000496633 RPL37P61927 97 aaKnown RBP4.13□□□□□ -1.75
CDHR3-214ENST00000496633 HIST1H4AP62805 103 aaKnown RBP4.13□□□□□ -1.75
CDHR3-214ENST00000496633 ATP11AUNQ6ZP68 121 aa4.12□□□□□ -1.75
CDHR3-214ENST00000496633 A0A1W2PNM2 257 aa4.11□□□□□ -1.75
CDHR3-214ENST00000496633 J3KT08 172 aa4.11□□□□□ -1.75
CDHR3-214ENST00000496633 KRTAP3-1Q9BYR8 98 aa4.11□□□□□ -1.75
CDHR3-214ENST00000496633 PCOTHQ58A44 107 aa4.1□□□□□ -1.75
CDHR3-214ENST00000496633 IGKV4-1P06312 121 aa4.09□□□□□ -1.75
CDHR3-214ENST00000496633 Q96NJ1 140 aa4.09□□□□□ -1.75
CDHR3-214ENST00000496633 UQCRQO14949 82 aa4.08□□□□□ -1.76
CDHR3-214ENST00000496633 NDUFB1O75438 58 aa4.08□□□□□ -1.76
CDHR3-214ENST00000496633 LINC00313P59037 77 aa4.08□□□□□ -1.76
CDHR3-214ENST00000496633 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
CDHR3-214ENST00000496633 LOC110117498A0A087WWA1 95 aa4.07□□□□□ -1.76
CDHR3-214ENST00000496633 C8orf87E5RJ46 101 aa4.07□□□□□ -1.76
CDHR3-214ENST00000496633 C20orf166-AS1Q96NR2 134 aa4.07□□□□□ -1.76
CDHR3-214ENST00000496633 LINC00472Q9H8W2 130 aa4.07□□□□□ -1.76
CDHR3-214ENST00000496633 CCDC179H3BU77 68 aa4.06□□□□□ -1.76
CDHR3-214ENST00000496633 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
CDHR3-214ENST00000496633 ATOX1O00244 68 aa4.05□□□□□ -1.76
CDHR3-214ENST00000496633 COX7CP15954 63 aa4.05□□□□□ -1.76
CDHR3-214ENST00000496633 C5orf47Q569G3 176 aa4.05□□□□□ -1.76
CDHR3-214ENST00000496633 ATP5EP2Q5VTU8 51 aa4.05□□□□□ -1.76
CDHR3-214ENST00000496633 Q6ZQT0 140 aa4.05□□□□□ -1.76
CDHR3-214ENST00000496633 A8MUU9 505 aa4.04□□□□□ -1.76
CDHR3-214ENST00000496633 IGHV6-1A0A0B4J1U7 121 aa4.02□□□□□ -1.77
CDHR3-214ENST00000496633 FAM236AA0A1B0GUQ0 79 aa4.02□□□□□ -1.77
CDHR3-214ENST00000496633 FAM236BA0A1B0GV22 79 aa4.02□□□□□ -1.77
CDHR3-214ENST00000496633 A0A1B0GVX0 72 aa4.02□□□□□ -1.77
CDHR3-214ENST00000496633 COX6B2Q6YFQ2 88 aa4.02□□□□□ -1.77
CDHR3-214ENST00000496633 V9GYY9 64 aa4.02□□□□□ -1.77
CDHR3-214ENST00000496633 DSCR10P59022 87 aa4.01□□□□□ -1.77
CDHR3-214ENST00000496633 NREPQ16612 68 aa4.01□□□□□ -1.77
CDHR3-214ENST00000496633 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
CDHR3-214ENST00000496633 KRTAP4-1Q9BYQ7 146 aa4.01□□□□□ -1.77
CDHR3-214ENST00000496633 C14orf132Q9NPU4 83 aa4.01□□□□□ -1.77
CDHR3-214ENST00000496633 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
CDHR3-214ENST00000496633 A8MWP4 228 aa4□□□□□ -1.77
CDHR3-214ENST00000496633 SERP2Q8N6R1 65 aa4□□□□□ -1.77
CDHR3-214ENST00000496633 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
CDHR3-214ENST00000496633 TMEM258P61165 79 aa3.99□□□□□ -1.77
CDHR3-214ENST00000496633 DEFB116Q30KQ4 102 aa3.99□□□□□ -1.77
CDHR3-214ENST00000496633 LINC00846Q9NV44 126 aa3.98□□□□□ -1.77
CDHR3-214ENST00000496633 KRTAP16-1A8MUX0 517 aa3.97□□□□□ -1.77
CDHR3-214ENST00000496633 SMIM20Q8N5G0 67 aa3.96□□□□□ -1.78
CDHR3-214ENST00000496633 RBM12B-AS1Q9P1G2 102 aa3.96□□□□□ -1.78
CDHR3-214ENST00000496633 M0R2T5 61 aa3.95□□□□□ -1.78
CDHR3-214ENST00000496633 PRR15Q8IV56 129 aa3.95□□□□□ -1.78
CDHR3-214ENST00000496633 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
CDHR3-214ENST00000496633 BPY2O14599 106 aa3.94□□□□□ -1.78
CDHR3-214ENST00000496633 CXCL6P80162 114 aa3.94□□□□□ -1.78
CDHR3-214ENST00000496633 UBL5Q9BZL1 73 aa3.94□□□□□ -1.78
CDHR3-214ENST00000496633 C8orf17Q9NRJ1 99 aa3.94□□□□□ -1.78
CDHR3-214ENST00000496633 IGKV3D-7A0A0C4DH55 119 aa3.93□□□□□ -1.78
CDHR3-214ENST00000496633 KLKP1Q107X0 134 aa3.93□□□□□ -1.78
CDHR3-214ENST00000496633 KRTAP19-2Q3LHN2 52 aa3.93□□□□□ -1.78
CDHR3-214ENST00000496633 ZCCHC13Q8WW36 166 aaKnown RBP3.93□□□□□ -1.78
CDHR3-214ENST00000496633 MT1HP80294 61 aa3.92□□□□□ -1.78
CDHR3-214ENST00000496633 NOTCH2NLQ7Z3S9 236 aa3.92□□□□□ -1.78
CDHR3-214ENST00000496633 TMEM254Q8TBM7 123 aa3.92□□□□□ -1.78
CDHR3-214ENST00000496633 TRAV7A0A075B6U4 112 aa3.91□□□□□ -1.78
CDHR3-214ENST00000496633 FAM236DA0A1B0GTK5 79 aa3.91□□□□□ -1.78
CDHR3-214ENST00000496633 hDV103S1A0JD37 113 aa3.91□□□□□ -1.78
CDHR3-214ENST00000496633 FAM236CP0DP71 79 aa3.91□□□□□ -1.78
CDHR3-214ENST00000496633 MRPL34Q9BQ48 92 aaKnown RBP3.91□□□□□ -1.78
CDHR3-214ENST00000496633 NDUFC1O43677 76 aa3.89□□□□□ -1.79
CDHR3-214ENST00000496633 ATP5EP56381 51 aaPredicted RBP3.88□□□□□ -1.79
CDHR3-214ENST00000496633 SPINK7P58062 85 aa3.88□□□□□ -1.79
CDHR3-214ENST00000496633 WFDC13Q8IUB5 93 aa3.88□□□□□ -1.79
CDHR3-214ENST00000496633 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
CDHR3-214ENST00000496633 MMP24-AS1A0A0U1RRL7 71 aa3.87□□□□□ -1.79
CDHR3-214ENST00000496633 H7BZZ5 65 aa3.87□□□□□ -1.79
CDHR3-214ENST00000496633 K7EQZ3 153 aa3.87□□□□□ -1.79
CDHR3-214ENST00000496633 NDUFS5O43920 106 aa3.87□□□□□ -1.79
CDHR3-214ENST00000496633 OCR1Q9BZK8 76 aa3.87□□□□□ -1.79
CDHR3-214ENST00000496633 CYSTM1Q9H1C7 97 aa3.87□□□□□ -1.79
CDHR3-214ENST00000496633 A0A087WVE0 104 aa3.86□□□□□ -1.79
CDHR3-214ENST00000496633 CASC2Q6XLA1 102 aa3.86□□□□□ -1.79
CDHR3-214ENST00000496633 KRTAP10-6P60371 365 aaPredicted RBP3.85□□□□□ -1.79
CDHR3-214ENST00000496633 SERP1Q9Y6X1 66 aa3.85□□□□□ -1.79
CDHR3-214ENST00000496633 HRES1P13985 223 aa3.84□□□□□ -1.79
CDHR3-214ENST00000496633 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
CDHR3-214ENST00000496633 FLGP20930 4061 aaPredicted RBP3.84□□□□□ -1.79
CDHR3-214ENST00000496633 HCG22E2RYF7 251 aa3.83□□□□□ -1.8
CDHR3-214ENST00000496633 C7orf65Q6ZTY9 151 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms