RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-222ENST00000496574 HIVEP1P15822 2718 aa8.38□□□□□ -1.07
PKD1-222ENST00000496574 PANO1I0J062 215 aa8.36□□□□□ -1.07
PKD1-222ENST00000496574 FLG2Q5D862 2391 aaPredicted RBP8.35□□□□□ -1.07
PKD1-222ENST00000496574 HRNRQ86YZ3 2850 aaPredicted RBP8.35□□□□□ -1.07
PKD1-222ENST00000496574 KRTAP11-1Q8IUC1 163 aa8.34□□□□□ -1.08
PKD1-222ENST00000496574 ZFHX4Q86UP3 3567 aa8.33□□□□□ -1.08
PKD1-222ENST00000496574 ADM2Q7Z4H4 148 aa8.31□□□□□ -1.08
PKD1-222ENST00000496574 NF1P21359 2839 aa8.31□□□□□ -1.08
PKD1-222ENST00000496574 FBN2P35556 2912 aa8.3□□□□□ -1.08
PKD1-222ENST00000496574 RELNP78509 3460 aa8.3□□□□□ -1.08
PKD1-222ENST00000496574 DCHS2Q6V1P9 2916 aa8.28□□□□□ -1.08
PKD1-222ENST00000496574 J3QL48 77 aa8.24□□□□□ -1.09
PKD1-222ENST00000496574 H1FX-AS1Q4G0G2 97 aa8.24□□□□□ -1.09
PKD1-222ENST00000496574 RPL37P61927 97 aaKnown RBP8.22□□□□□ -1.09
PKD1-222ENST00000496574 ROMO1P60602 79 aa8.22□□□□□ -1.09
PKD1-222ENST00000496574 LUZP6Q538Z0 58 aa8.22□□□□□ -1.09
PKD1-222ENST00000496574 TENM4Q6N022 2769 aa8.2□□□□□ -1.1
PKD1-222ENST00000496574 KMT2BQ9UMN6 2715 aaPredicted RBP8.18□□□□□ -1.1
PKD1-222ENST00000496574 KRTAP13-1Q8IUC0 172 aa8.18□□□□□ -1.1
PKD1-222ENST00000496574 CRYBG3Q68DQ2 2970 aa8.16□□□□□ -1.1
PKD1-222ENST00000496574 KRTAP25-1Q3LHN0 102 aa8.15□□□□□ -1.11
PKD1-222ENST00000496574 COX6B2Q6YFQ2 88 aa8.13□□□□□ -1.11
PKD1-222ENST00000496574 MXRA5Q9NR99 2828 aa8.12□□□□□ -1.11
PKD1-222ENST00000496574 SMG1Q96Q15 3661 aaKnown RBP8.11□□□□□ -1.11
PKD1-222ENST00000496574 S4R3F8 94 aa8.1□□□□□ -1.11
PKD1-222ENST00000496574 KRTAP10-2P60368 255 aa8.06□□□□□ -1.12
PKD1-222ENST00000496574 Q6ZRN7 208 aaPredicted RBP8.06□□□□□ -1.12
PKD1-222ENST00000496574 KRTAP10-1P60331 282 aa8.06□□□□□ -1.12
PKD1-222ENST00000496574 Q6ZSA8 131 aa8.02□□□□□ -1.12
PKD1-222ENST00000496574 CAMK2N1Q7Z7J9 78 aa8□□□□□ -1.13
PKD1-222ENST00000496574 A0A0A0MQY5 61 aa7.96□□□□□ -1.14
PKD1-222ENST00000496574 KRTAP13-2Q52LG2 175 aa7.96□□□□□ -1.14
PKD1-222ENST00000496574 R4GN34 69 aa7.93□□□□□ -1.14
PKD1-222ENST00000496574 CSMD1Q96PZ7 3565 aa7.93□□□□□ -1.14
PKD1-222ENST00000496574 SVEP1Q4LDE5 3571 aa7.9□□□□□ -1.14
PKD1-222ENST00000496574 CELSR1Q9NYQ6 3014 aa7.89□□□□□ -1.15
PKD1-222ENST00000496574 KRTAP16-1A8MUX0 517 aa7.89□□□□□ -1.15
PKD1-222ENST00000496574 A8MUU9 505 aa7.88□□□□□ -1.15
PKD1-222ENST00000496574 TENM3Q9P273 2699 aa7.87□□□□□ -1.15
PKD1-222ENST00000496574 SPENQ96T58 3664 aaKnown RBP7.87□□□□□ -1.15
PKD1-222ENST00000496574 NDUFAF8A1L188 74 aa7.86□□□□□ -1.15
PKD1-222ENST00000496574 RPS29P62273 56 aaKnown RBP7.85□□□□□ -1.15
PKD1-222ENST00000496574 M0QZ58 72 aa7.83□□□□□ -1.16
PKD1-222ENST00000496574 PDZD2O15018 2839 aa7.77□□□□□ -1.17
PKD1-222ENST00000496574 BSNQ9UPA5 3926 aa7.77□□□□□ -1.17
PKD1-222ENST00000496574 TGP01266 2768 aa7.76□□□□□ -1.17
PKD1-222ENST00000496574 H0YAA0 97 aa7.75□□□□□ -1.17
PKD1-222ENST00000496574 KRTAP21-3Q3LHN1 58 aa7.7□□□□□ -1.18
PKD1-222ENST00000496574 C20orf166-AS1Q96NR2 134 aa7.68□□□□□ -1.18
PKD1-222ENST00000496574 KRTAP13-3Q3SY46 172 aa7.68□□□□□ -1.18
PKD1-222ENST00000496574 CUBNO60494 3623 aa7.67□□□□□ -1.18
PKD1-222ENST00000496574 PKD1L1Q8TDX9 2849 aa7.66□□□□□ -1.18
PKD1-222ENST00000496574 SEC61BP60468 96 aaKnown RBP7.65□□□□□ -1.18
PKD1-222ENST00000496574 Q5VSD8 79 aa7.64□□□□□ -1.19
PKD1-222ENST00000496574 TENM1Q9UKZ4 2725 aa7.63□□□□□ -1.19
PKD1-222ENST00000496574 CSMD2Q7Z408 3487 aa7.62□□□□□ -1.19
PKD1-222ENST00000496574 VWFP04275 2813 aa7.62□□□□□ -1.19
PKD1-222ENST00000496574 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
PKD1-222ENST00000496574 C10orf95Q9H7T3 257 aa7.6□□□□□ -1.19
PKD1-222ENST00000496574 M0R2T5 61 aa7.6□□□□□ -1.19
PKD1-222ENST00000496574 OTOGQ6ZRI0 2925 aa7.56□□□□□ -1.2
PKD1-222ENST00000496574 ZFHX3Q15911 3703 aa7.51□□□□□ -1.21
PKD1-222ENST00000496574 FBN1P35555 2871 aaKnown RBP7.49□□□□□ -1.21
PKD1-222ENST00000496574 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
PKD1-222ENST00000496574 TENM2Q9NT68 2774 aa7.47□□□□□ -1.21
PKD1-222ENST00000496574 NBPF19A0A087WUL8 3843 aa7.46□□□□□ -1.22
PKD1-222ENST00000496574 VPS13CQ709C8 3753 aa7.43□□□□□ -1.22
PKD1-222ENST00000496574 P0C880 135 aa7.43□□□□□ -1.22
PKD1-222ENST00000496574 SRRM2Q9UQ35 2752 aaKnown RBP7.37□□□□□ -1.23
PKD1-222ENST00000496574 XP32Q5T750 250 aa7.3□□□□□ -1.24
PKD1-222ENST00000496574 PP632Q6XCG6 107 aa7.29□□□□□ -1.24
PKD1-222ENST00000496574 TNP1P09430 55 aa7.27□□□□□ -1.25
PKD1-222ENST00000496574 FBN3Q75N90 2809 aa7.26□□□□□ -1.25
PKD1-222ENST00000496574 KRTAP10-8P60410 259 aa7.21□□□□□ -1.26
PKD1-222ENST00000496574 TPRXLQ17RH7 258 aa7.2□□□□□ -1.26
PKD1-222ENST00000496574 KRTAP3-1Q9BYR8 98 aa7.18□□□□□ -1.26
PKD1-222ENST00000496574 ZNF469Q96JG9 3925 aaPredicted RBP7.17□□□□□ -1.26
PKD1-222ENST00000496574 KRTAP12-2P59991 146 aa7.15□□□□□ -1.27
PKD1-222ENST00000496574 MEGF8Q7Z7M0 2845 aa7.14□□□□□ -1.27
PKD1-222ENST00000496574 TRRAPQ9Y4A5 3859 aa7.1□□□□□ -1.27
PKD1-222ENST00000496574 ANK3Q12955 4377 aaKnown RBP7.06□□□□□ -1.28
PKD1-222ENST00000496574 KRTAP12-1P59990 96 aa7.06□□□□□ -1.28
PKD1-222ENST00000496574 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
PKD1-222ENST00000496574 KRTAP10-6P60371 365 aaPredicted RBP7.01□□□□□ -1.29
PKD1-222ENST00000496574 COL7A1Q02388 2944 aa7□□□□□ -1.29
PKD1-222ENST00000496574 A0A1B0GVY2 172 aa6.88□□□□□ -1.31
PKD1-222ENST00000496574 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
PKD1-222ENST00000496574 AKAP9Q99996 3911 aa6.84□□□□□ -1.31
PKD1-222ENST00000496574 KRTAP3-2Q9BYR7 98 aa6.79□□□□□ -1.32
PKD1-222ENST00000496574 KRTAP3-3Q9BYR6 98 aa6.75□□□□□ -1.33
PKD1-222ENST00000496574 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
PKD1-222ENST00000496574 CSMD3Q7Z407 3707 aa6.58□□□□□ -1.36
PKD1-222ENST00000496574 HUWE1Q7Z6Z7 4374 aaKnown RBP6.49□□□□□ -1.37
PKD1-222ENST00000496574 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
PKD1-222ENST00000496574 KRTAP10-4P60372 401 aaPredicted RBP6.43□□□□□ -1.38
PKD1-222ENST00000496574 MT1HL1P0DM35 61 aa6.37□□□□□ -1.39
PKD1-222ENST00000496574 DNHD1Q96M86 4753 aa6.33□□□□□ -1.4
PKD1-222ENST00000496574 INE1O15225 51 aa6.32□□□□□ -1.4
PKD1-222ENST00000496574 ANK2Q01484 3957 aa6.29□□□□□ -1.4
PKD1-222ENST00000496574 DNAH9Q9NYC9 4486 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms