RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 IGHV6-1A0A0B4J1U7 121 aa12□□□□□ -0.49
CHRD-217ENST00000496527 A8MUU9 505 aa12□□□□□ -0.49
CHRD-217ENST00000496527 J3KT08 172 aa12□□□□□ -0.49
CHRD-217ENST00000496527 NOTCH2NLQ7Z3S9 236 aa11.96□□□□□ -0.49
CHRD-217ENST00000496527 A0A1B0GVX0 72 aa11.95□□□□□ -0.5
CHRD-217ENST00000496527 PCP4L1A6NKN8 68 aa11.95□□□□□ -0.5
CHRD-217ENST00000496527 KRTAP16-1A8MUX0 517 aa11.93□□□□□ -0.5
CHRD-217ENST00000496527 C8orf87E5RJ46 101 aa11.93□□□□□ -0.5
CHRD-217ENST00000496527 NDUFB1O75438 58 aa11.91□□□□□ -0.5
CHRD-217ENST00000496527 NREPQ16612 68 aa11.89□□□□□ -0.51
CHRD-217ENST00000496527 KRTAP19-2Q3LHN2 52 aa11.89□□□□□ -0.51
CHRD-217ENST00000496527 LCE2CQ5TA81 110 aa11.88□□□□□ -0.51
CHRD-217ENST00000496527 K7EP34 96 aa11.87□□□□□ -0.51
CHRD-217ENST00000496527 SMCPP49901 116 aaPredicted RBP11.86□□□□□ -0.51
CHRD-217ENST00000496527 A8MWP4 228 aa11.85□□□□□ -0.51
CHRD-217ENST00000496527 COX6B2Q6YFQ2 88 aa11.81□□□□□ -0.52
CHRD-217ENST00000496527 PRO0461Q9UI25 63 aa11.81□□□□□ -0.52
CHRD-217ENST00000496527 IGKV3D-7A0A0C4DH55 119 aa11.79□□□□□ -0.52
CHRD-217ENST00000496527 GTF2H5Q6ZYL4 71 aa11.79□□□□□ -0.52
CHRD-217ENST00000496527 C8orf17Q9NRJ1 99 aa11.77□□□□□ -0.53
CHRD-217ENST00000496527 PRR15Q8IV56 129 aa11.75□□□□□ -0.53
CHRD-217ENST00000496527 MT1HP80294 61 aa11.74□□□□□ -0.53
CHRD-217ENST00000496527 BPY2O14599 106 aa11.69□□□□□ -0.54
CHRD-217ENST00000496527 Q8N9P0 234 aaPredicted RBP11.69□□□□□ -0.54
CHRD-217ENST00000496527 Q6ZVQ6 151 aa11.68□□□□□ -0.54
CHRD-217ENST00000496527 F8W1H4 67 aa11.67□□□□□ -0.54
CHRD-217ENST00000496527 ZCCHC13Q8WW36 166 aaKnown RBP11.66□□□□□ -0.54
CHRD-217ENST00000496527 K7EQZ3 153 aa11.65□□□□□ -0.54
CHRD-217ENST00000496527 MMP24-AS1A0A0U1RRL7 71 aa11.62□□□□□ -0.55
CHRD-217ENST00000496527 M0R2T5 61 aa11.61□□□□□ -0.55
CHRD-217ENST00000496527 TMEM254Q8TBM7 123 aa11.61□□□□□ -0.55
CHRD-217ENST00000496527 UBL5Q9BZL1 73 aa11.6□□□□□ -0.55
CHRD-217ENST00000496527 LINC00846Q9NV44 126 aa11.6□□□□□ -0.55
CHRD-217ENST00000496527 hDV103S1A0JD37 113 aa11.59□□□□□ -0.55
CHRD-217ENST00000496527 MRPL34Q9BQ48 92 aaKnown RBP11.59□□□□□ -0.55
CHRD-217ENST00000496527 ETDBQ3ZM63 59 aa11.58□□□□□ -0.56
CHRD-217ENST00000496527 HRES1P13985 223 aa11.53□□□□□ -0.56
CHRD-217ENST00000496527 Q8N9L7 120 aa11.53□□□□□ -0.56
CHRD-217ENST00000496527 RBM12B-AS1Q9P1G2 102 aa11.52□□□□□ -0.57
CHRD-217ENST00000496527 FAM236DA0A1B0GTK5 79 aa11.51□□□□□ -0.57
CHRD-217ENST00000496527 NDUFS5O43920 106 aa11.51□□□□□ -0.57
CHRD-217ENST00000496527 FAM236CP0DP71 79 aa11.51□□□□□ -0.57
CHRD-217ENST00000496527 SPINK7P58062 85 aa11.51□□□□□ -0.57
CHRD-217ENST00000496527 KRTAP9-2Q9BYQ4 174 aa11.51□□□□□ -0.57
CHRD-217ENST00000496527 KRTAP10-6P60371 365 aaPredicted RBP11.48□□□□□ -0.57
CHRD-217ENST00000496527 WFDC13Q8IUB5 93 aa11.48□□□□□ -0.57
CHRD-217ENST00000496527 MPLKIPQ8TAP9 179 aa11.48□□□□□ -0.57
CHRD-217ENST00000496527 CASC2Q6XLA1 102 aa11.46□□□□□ -0.57
CHRD-217ENST00000496527 FLGP20930 4061 aaPredicted RBP11.46□□□□□ -0.58
CHRD-217ENST00000496527 LORP23490 312 aaPredicted RBP11.45□□□□□ -0.58
CHRD-217ENST00000496527 HCG22E2RYF7 251 aa11.37□□□□□ -0.59
CHRD-217ENST00000496527 CXCL6P80162 114 aa11.36□□□□□ -0.59
CHRD-217ENST00000496527 LCE2DQ5TA82 110 aaPredicted RBP11.34□□□□□ -0.59
CHRD-217ENST00000496527 ACYP1P07311 99 aa11.33□□□□□ -0.6
CHRD-217ENST00000496527 Q5W150 140 aa11.32□□□□□ -0.6
CHRD-217ENST00000496527 A0A1B0GV90 55 aa11.29□□□□□ -0.6
CHRD-217ENST00000496527 FAM240AA0A1B0GVK7 77 aa11.27□□□□□ -0.61
CHRD-217ENST00000496527 IGKV2D-30A0A075B6S6 120 aa11.26□□□□□ -0.61
CHRD-217ENST00000496527 IGKV2-30P06310 120 aa11.26□□□□□ -0.61
CHRD-217ENST00000496527 C7orf65Q6ZTY9 151 aa11.24□□□□□ -0.61
CHRD-217ENST00000496527 ATP5EP2Q5VTU8 51 aa11.16□□□□□ -0.62
CHRD-217ENST00000496527 TP53AIP1Q9HCN2 124 aa11.16□□□□□ -0.62
CHRD-217ENST00000496527 KRTAP9-8Q9BYQ0 159 aa11.14□□□□□ -0.63
CHRD-217ENST00000496527 HIST1H4AP62805 103 aaKnown RBP11.09□□□□□ -0.63
CHRD-217ENST00000496527 H1FX-AS1Q4G0G2 97 aa11.08□□□□□ -0.64
CHRD-217ENST00000496527 LINC00643Q86TS7 51 aa11.06□□□□□ -0.64
CHRD-217ENST00000496527 KRTAP9-6A0A140TA67 174 aa11.04□□□□□ -0.64
CHRD-217ENST00000496527 C4orf26Q17RF5 130 aa11.03□□□□□ -0.64
CHRD-217ENST00000496527 MT2AP02795 61 aa11.01□□□□□ -0.65
CHRD-217ENST00000496527 J3QR89 54 aa10.98□□□□□ -0.65
CHRD-217ENST00000496527 CRCT1Q9UGL9 99 aa10.94□□□□□ -0.66
CHRD-217ENST00000496527 A0A087WVE0 104 aa10.93□□□□□ -0.66
CHRD-217ENST00000496527 TRAV22A0A0B4J277 110 aa10.93□□□□□ -0.66
CHRD-217ENST00000496527 MT1FP04733 61 aa10.93□□□□□ -0.66
CHRD-217ENST00000496527 KRTAP10-10P60014 251 aa10.93□□□□□ -0.66
CHRD-217ENST00000496527 UQCRQO14949 82 aa10.89□□□□□ -0.67
CHRD-217ENST00000496527 CYP4F30PQ9H0H9 118 aa10.88□□□□□ -0.67
CHRD-217ENST00000496527 FSIP2Q5CZC0 6907 aa10.87□□□□□ -0.67
CHRD-217ENST00000496527 C1orf64Q8NEQ6 169 aa10.87□□□□□ -0.67
CHRD-217ENST00000496527 LOC101927531A0A1B0GV80 90 aa10.86□□□□□ -0.67
CHRD-217ENST00000496527 KRTAP3-1Q9BYR8 98 aa10.84□□□□□ -0.67
CHRD-217ENST00000496527 H0Y9P7 68 aa10.81□□□□□ -0.68
CHRD-217ENST00000496527 ATOX1O00244 68 aa10.81□□□□□ -0.68
CHRD-217ENST00000496527 KRTAP9-3Q9BYQ3 159 aa10.79□□□□□ -0.68
CHRD-217ENST00000496527 S4R3F8 94 aa10.76□□□□□ -0.69
CHRD-217ENST00000496527 C5orf47Q569G3 176 aa10.72□□□□□ -0.69
CHRD-217ENST00000496527 OCR1Q9BZK8 76 aa10.7□□□□□ -0.7
CHRD-217ENST00000496527 LCE2BO14633 110 aa10.67□□□□□ -0.7
CHRD-217ENST00000496527 LCA10Q71F78 164 aa10.67□□□□□ -0.7
CHRD-217ENST00000496527 LINC00208Q96KT6 92 aa10.67□□□□□ -0.7
CHRD-217ENST00000496527 K7ERU9 68 aa10.66□□□□□ -0.7
CHRD-217ENST00000496527 MP68P56378 58 aa10.66□□□□□ -0.7
CHRD-217ENST00000496527 CSAG1Q6PB30 78 aa10.66□□□□□ -0.7
CHRD-217ENST00000496527 SCGB1A1P11684 91 aa10.63□□□□□ -0.71
CHRD-217ENST00000496527 USH2AO75445 5202 aa10.58□□□□□ -0.72
CHRD-217ENST00000496527 IMUPQ9GZP8 106 aa10.58□□□□□ -0.72
CHRD-217ENST00000496527 MT-ATP8P03928 68 aa10.55□□□□□ -0.72
CHRD-217ENST00000496527 KLKP1Q107X0 134 aa10.55□□□□□ -0.72
CHRD-217ENST00000496527 FAM236AA0A1B0GUQ0 79 aa10.53□□□□□ -0.72
CHRD-217ENST00000496527 FAM236BA0A1B0GV22 79 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms