RNA–Protein interactions for RNA: ENST00000496489.5

NCK1-212, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-212ENST00000496489 CSPG4Q6UVK1 2322 aa0.64□□□□□ -2.31
NCK1-212ENST00000496489 MACF1Q9UPN3 7388 aaKnown RBP0.64□□□□□ -2.31
NCK1-212ENST00000496489 CELSR2Q9HCU4 2923 aa0.64□□□□□ -2.31
NCK1-212ENST00000496489 CRYBG3Q68DQ2 2970 aa0.64□□□□□ -2.31
NCK1-212ENST00000496489 ZNF462Q96JM2 2506 aa0.64□□□□□ -2.31
NCK1-212ENST00000496489 SPEGQ15772 3267 aa0.63□□□□□ -2.31
NCK1-212ENST00000496489 LAMA2P24043 3122 aaKnown RBP0.63□□□□□ -2.31
NCK1-212ENST00000496489 SPTBN5Q9NRC6 3674 aaKnown RBP0.63□□□□□ -2.31
NCK1-212ENST00000496489 XIRP2A4UGR9 3374 aa0.63□□□□□ -2.31
NCK1-212ENST00000496489 C5orf42Q9H799 3197 aa0.63□□□□□ -2.31
NCK1-212ENST00000496489 DEFB135Q30KP9 77 aa0.63□□□□□ -2.31
NCK1-212ENST00000496489 UBR5O95071 2799 aaPredicted RBP0.63□□□□□ -2.31
NCK1-212ENST00000496489 MAP1BP46821 2468 aaKnown RBP0.63□□□□□ -2.31
NCK1-212ENST00000496489 FBN2P35556 2912 aa0.63□□□□□ -2.31
NCK1-212ENST00000496489 SPTA1P02549 2419 aa0.63□□□□□ -2.31
NCK1-212ENST00000496489 DSPP15924 2871 aaKnown RBP0.63□□□□□ -2.31
NCK1-212ENST00000496489 DMDP11532 3685 aa0.62□□□□□ -2.31
NCK1-212ENST00000496489 NOTCH1P46531 2555 aa0.62□□□□□ -2.31
NCK1-212ENST00000496489 TRIOO75962 3097 aa0.62□□□□□ -2.31
NCK1-212ENST00000496489 REV3LO60673 3130 aa0.62□□□□□ -2.31
NCK1-212ENST00000496489 APC2O95996 2303 aa0.62□□□□□ -2.31
NCK1-212ENST00000496489 CCDC168Q8NDH2 2452 aa0.62□□□□□ -2.31
NCK1-212ENST00000496489 USP34Q70CQ2 3546 aa0.61□□□□□ -2.31
NCK1-212ENST00000496489 AKAP13Q12802 2813 aa0.61□□□□□ -2.31
NCK1-212ENST00000496489 KALRNO60229 2985 aa0.61□□□□□ -2.31
NCK1-212ENST00000496489 SPART-AS1P0CW21 52 aa0.61□□□□□ -2.31
NCK1-212ENST00000496489 LINC01556Q5JQF7 62 aa0.61□□□□□ -2.31
NCK1-212ENST00000496489 MAP1AP78559 2803 aaPredicted RBP0.61□□□□□ -2.31
NCK1-212ENST00000496489 RELNP78509 3460 aa0.61□□□□□ -2.31
NCK1-212ENST00000496489 HTTP42858 3142 aa0.61□□□□□ -2.31
NCK1-212ENST00000496489 PRRC2CQ9Y520 2896 aaKnown RBP0.61□□□□□ -2.31
NCK1-212ENST00000496489 NCOR2Q9Y618 2525 aa0.61□□□□□ -2.31
NCK1-212ENST00000496489 MEGF8Q7Z7M0 2845 aa0.6□□□□□ -2.31
NCK1-212ENST00000496489 ABCA2Q9BZC7 2435 aa0.6□□□□□ -2.31
NCK1-212ENST00000496489 CHD9Q3L8U1 2897 aa0.6□□□□□ -2.31
NCK1-212ENST00000496489 ITPR1Q14643 2758 aa0.6□□□□□ -2.31
NCK1-212ENST00000496489 DNAH12Q6ZR08 3092 aa0.6□□□□□ -2.31
NCK1-212ENST00000496489 NCOR1O75376 2440 aa0.6□□□□□ -2.31
NCK1-212ENST00000496489 CELSR1Q9NYQ6 3014 aa0.6□□□□□ -2.31
NCK1-212ENST00000496489 DMXL1Q9Y485 3027 aa0.6□□□□□ -2.31
NCK1-212ENST00000496489 COL6A5A8TX70 2615 aa0.6□□□□□ -2.31
NCK1-212ENST00000496489 COL12A1Q99715 3063 aa0.6□□□□□ -2.31
NCK1-212ENST00000496489 LOC400499M0QZD8 3231 aa0.6□□□□□ -2.31
NCK1-212ENST00000496489 WDFY3Q8IZQ1 3526 aa0.6□□□□□ -2.31
NCK1-212ENST00000496489 EP300Q09472 2414 aaPredicted RBP0.59□□□□□ -2.31
NCK1-212ENST00000496489 GVINP1Q7Z2Y8 2422 aa0.59□□□□□ -2.31
NCK1-212ENST00000496489 SRRM2Q9UQ35 2752 aaKnown RBP0.59□□□□□ -2.31
NCK1-212ENST00000496489 TTC28Q96AY4 2481 aa0.59□□□□□ -2.31
NCK1-212ENST00000496489 CSMD1Q96PZ7 3565 aa0.59□□□□□ -2.31
NCK1-212ENST00000496489 VWFP04275 2813 aa0.59□□□□□ -2.31
NCK1-212ENST00000496489 FREM2Q5SZK8 3169 aa0.59□□□□□ -2.31
NCK1-212ENST00000496489 FRYQ5TBA9 3013 aa0.59□□□□□ -2.31
NCK1-212ENST00000496489 DEFB124Q8NES8 71 aa0.59□□□□□ -2.31
NCK1-212ENST00000496489 TRANK1O15050 2925 aa0.59□□□□□ -2.32
NCK1-212ENST00000496489 DNAH14Q0VDD8 3507 aa0.59□□□□□ -2.32
NCK1-212ENST00000496489 DMXL2Q8TDJ6 3036 aa0.59□□□□□ -2.32
NCK1-212ENST00000496489 FAM186AA6NE01 2351 aa0.59□□□□□ -2.32
NCK1-212ENST00000496489 LAMA1P25391 3075 aa0.58□□□□□ -2.32
NCK1-212ENST00000496489 EP400Q96L91 3159 aa0.58□□□□□ -2.32
NCK1-212ENST00000496489 LRBAP50851 2863 aa0.58□□□□□ -2.32
NCK1-212ENST00000496489 BRCA2P51587 3418 aa0.58□□□□□ -2.32
NCK1-212ENST00000496489 C9orf92A6NGG3 77 aa0.58□□□□□ -2.32
NCK1-212ENST00000496489 H3BNG1 76 aa0.58□□□□□ -2.32
NCK1-212ENST00000496489 M0QZ58 72 aa0.58□□□□□ -2.32
NCK1-212ENST00000496489 LAMA3Q16787 3333 aa0.58□□□□□ -2.32
NCK1-212ENST00000496489 TEX15Q9BXT5 2789 aa0.58□□□□□ -2.32
NCK1-212ENST00000496489 SPG11Q96JI7 2443 aa0.58□□□□□ -2.32
NCK1-212ENST00000496489 F8P00451 2351 aa0.57□□□□□ -2.32
NCK1-212ENST00000496489 VCANP13611 3396 aa0.57□□□□□ -2.32
NCK1-212ENST00000496489 NBASA2RRP1 2371 aa0.57□□□□□ -2.32
NCK1-212ENST00000496489 ATMQ13315 3056 aa0.57□□□□□ -2.32
NCK1-212ENST00000496489 CREBBPQ92793 2442 aa0.57□□□□□ -2.32
NCK1-212ENST00000496489 AHNAK2Q8IVF2 5795 aa0.57□□□□□ -2.32
NCK1-212ENST00000496489 CEP290O15078 2479 aa0.57□□□□□ -2.32
NCK1-212ENST00000496489 LAMA5O15230 3695 aa0.57□□□□□ -2.32
NCK1-212ENST00000496489 NF1P21359 2839 aa0.56□□□□□ -2.32
NCK1-212ENST00000496489 HECTD1Q9ULT8 2610 aa0.56□□□□□ -2.32
NCK1-212ENST00000496489 COL7A1Q02388 2944 aa0.56□□□□□ -2.32
NCK1-212ENST00000496489 KRTAP5-10Q6L8G5 202 aa0.56□□□□□ -2.32
NCK1-212ENST00000496489 CELSR3Q9NYQ7 3312 aa0.56□□□□□ -2.32
NCK1-212ENST00000496489 AKAP9Q99996 3911 aa0.56□□□□□ -2.32
NCK1-212ENST00000496489 TACC2O95359 2948 aa0.56□□□□□ -2.32
NCK1-212ENST00000496489 NBPF19A0A087WUL8 3843 aa0.56□□□□□ -2.32
NCK1-212ENST00000496489 RIF1Q5UIP0 2472 aaKnown RBP0.56□□□□□ -2.32
NCK1-212ENST00000496489 PDZD2O15018 2839 aa0.56□□□□□ -2.32
NCK1-212ENST00000496489 CSMD3Q7Z407 3707 aa0.55□□□□□ -2.32
NCK1-212ENST00000496489 SONP18583 2426 aaKnown RBP0.55□□□□□ -2.32
NCK1-212ENST00000496489 SPENQ96T58 3664 aaKnown RBP0.55□□□□□ -2.32
NCK1-212ENST00000496489 KRTAP2-3P0C7H8 128 aa0.55□□□□□ -2.32
NCK1-212ENST00000496489 KRTAP19-3Q7Z4W3 81 aa0.55□□□□□ -2.32
NCK1-212ENST00000496489 SMR3AQ99954 134 aa0.55□□□□□ -2.32
NCK1-212ENST00000496489 KRTAP2-4Q9BYR9 128 aa0.55□□□□□ -2.32
NCK1-212ENST00000496489 KRTAP2-1Q9BYU5 128 aa0.55□□□□□ -2.32
NCK1-212ENST00000496489 USP9XQ93008 2570 aaPredicted RBP0.55□□□□□ -2.32
NCK1-212ENST00000496489 ITPR3Q14573 2671 aa0.55□□□□□ -2.32
NCK1-212ENST00000496489 HIVEP3Q5T1R4 2406 aa0.55□□□□□ -2.32
NCK1-212ENST00000496489 APCP25054 2843 aa0.55□□□□□ -2.32
NCK1-212ENST00000496489 HRNRQ86YZ3 2850 aaPredicted RBP0.55□□□□□ -2.32
NCK1-212ENST00000496489 DCHS2Q6V1P9 2916 aa0.54□□□□□ -2.32
NCK1-212ENST00000496489 SMG1Q96Q15 3661 aaKnown RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms