RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ANAPC13Q9BS18 74 aa4.99□□□□□ -1.61
U2AF1-212ENST00000496462 FAM240AA0A1B0GVK7 77 aa4.98□□□□□ -1.61
U2AF1-212ENST00000496462 C4orf26Q17RF5 130 aa4.98□□□□□ -1.61
U2AF1-212ENST00000496462 LINC00643Q86TS7 51 aa4.97□□□□□ -1.61
U2AF1-212ENST00000496462 A0A0G2JQZ4 141 aa4.97□□□□□ -1.61
U2AF1-212ENST00000496462 Q96NJ1 140 aa4.97□□□□□ -1.61
U2AF1-212ENST00000496462 Q6ZVQ6 151 aa4.97□□□□□ -1.61
U2AF1-212ENST00000496462 A0A0U1RQV1 116 aa4.96□□□□□ -1.62
U2AF1-212ENST00000496462 A8MWP4 228 aa4.96□□□□□ -1.62
U2AF1-212ENST00000496462 C1orf195Q5TG92 126 aa4.96□□□□□ -1.62
U2AF1-212ENST00000496462 OBSCN-AS1Q96MR7 158 aa4.95□□□□□ -1.62
U2AF1-212ENST00000496462 H3BS24 57 aa4.95□□□□□ -1.62
U2AF1-212ENST00000496462 A0A1B0GVX0 72 aa4.95□□□□□ -1.62
U2AF1-212ENST00000496462 C9orf92A6NGG3 77 aa4.95□□□□□ -1.62
U2AF1-212ENST00000496462 DEFB116Q30KQ4 102 aa4.95□□□□□ -1.62
U2AF1-212ENST00000496462 CXCL6P80162 114 aa4.93□□□□□ -1.62
U2AF1-212ENST00000496462 MT1HL1P0DM35 61 aa4.93□□□□□ -1.62
U2AF1-212ENST00000496462 CASC2Q6XLA1 102 aa4.92□□□□□ -1.62
U2AF1-212ENST00000496462 IGKV3D-7A0A0C4DH55 119 aa4.92□□□□□ -1.62
U2AF1-212ENST00000496462 FAM236DA0A1B0GTK5 79 aa4.91□□□□□ -1.62
U2AF1-212ENST00000496462 FAM236CP0DP71 79 aa4.91□□□□□ -1.62
U2AF1-212ENST00000496462 WFDC13Q8IUB5 93 aa4.91□□□□□ -1.62
U2AF1-212ENST00000496462 LINC00846Q9NV44 126 aa4.91□□□□□ -1.62
U2AF1-212ENST00000496462 hDV103S1A0JD37 113 aa4.9□□□□□ -1.62
U2AF1-212ENST00000496462 PRR15Q8IV56 129 aa4.9□□□□□ -1.62
U2AF1-212ENST00000496462 DSCR10P59022 87 aa4.9□□□□□ -1.63
U2AF1-212ENST00000496462 TPRXLQ17RH7 258 aa4.9□□□□□ -1.63
U2AF1-212ENST00000496462 C8orf17Q9NRJ1 99 aa4.89□□□□□ -1.63
U2AF1-212ENST00000496462 HCG22E2RYF7 251 aa4.89□□□□□ -1.63
U2AF1-212ENST00000496462 MP68P56378 58 aa4.89□□□□□ -1.63
U2AF1-212ENST00000496462 TMEM254Q8TBM7 123 aa4.89□□□□□ -1.63
U2AF1-212ENST00000496462 TP53AIP1Q9HCN2 124 aa4.88□□□□□ -1.63
U2AF1-212ENST00000496462 MRPL34Q9BQ48 92 aaKnown RBP4.88□□□□□ -1.63
U2AF1-212ENST00000496462 LINC00472Q9H8W2 130 aa4.88□□□□□ -1.63
U2AF1-212ENST00000496462 FAT3Q8TDW7 4589 aa4.86□□□□□ -1.63
U2AF1-212ENST00000496462 CYSTM1Q9H1C7 97 aa4.86□□□□□ -1.63
U2AF1-212ENST00000496462 PRO0628Q9UI54 55 aa4.86□□□□□ -1.63
U2AF1-212ENST00000496462 IMUPQ9GZP8 106 aa4.84□□□□□ -1.63
U2AF1-212ENST00000496462 COX6B2Q6YFQ2 88 aa4.84□□□□□ -1.64
U2AF1-212ENST00000496462 K7EQZ3 153 aa4.82□□□□□ -1.64
U2AF1-212ENST00000496462 ATOX1O00244 68 aa4.82□□□□□ -1.64
U2AF1-212ENST00000496462 RBM12B-AS1Q9P1G2 102 aa4.81□□□□□ -1.64
U2AF1-212ENST00000496462 Q75L30 129 aa4.8□□□□□ -1.64
U2AF1-212ENST00000496462 UBR4Q5T4S7 5183 aa4.79□□□□□ -1.64
U2AF1-212ENST00000496462 UQCRQO14949 82 aa4.79□□□□□ -1.64
U2AF1-212ENST00000496462 Q8N9L7 120 aa4.79□□□□□ -1.64
U2AF1-212ENST00000496462 HMCN2Q8NDA2 5059 aa4.79□□□□□ -1.64
U2AF1-212ENST00000496462 RPL37P61927 97 aaKnown RBP4.79□□□□□ -1.64
U2AF1-212ENST00000496462 KRTAP13-3Q3SY46 172 aa4.79□□□□□ -1.64
U2AF1-212ENST00000496462 FAM236AA0A1B0GUQ0 79 aa4.78□□□□□ -1.64
U2AF1-212ENST00000496462 FAM236BA0A1B0GV22 79 aa4.78□□□□□ -1.64
U2AF1-212ENST00000496462 LRP2P98164 4655 aa4.78□□□□□ -1.64
U2AF1-212ENST00000496462 ZCCHC13Q8WW36 166 aaKnown RBP4.77□□□□□ -1.65
U2AF1-212ENST00000496462 IGKV2D-30A0A075B6S6 120 aa4.76□□□□□ -1.65
U2AF1-212ENST00000496462 IGKV2-30P06310 120 aa4.76□□□□□ -1.65
U2AF1-212ENST00000496462 PKHD1L1Q86WI1 4243 aa4.76□□□□□ -1.65
U2AF1-212ENST00000496462 PCOTHQ58A44 107 aa4.75□□□□□ -1.65
U2AF1-212ENST00000496462 XP32Q5T750 250 aa4.75□□□□□ -1.65
U2AF1-212ENST00000496462 C7orf65Q6ZTY9 151 aa4.75□□□□□ -1.65
U2AF1-212ENST00000496462 MMP24-AS1A0A0U1RRL7 71 aa4.74□□□□□ -1.65
U2AF1-212ENST00000496462 LOC101927531A0A1B0GV80 90 aa4.73□□□□□ -1.65
U2AF1-212ENST00000496462 A0A0A0MQY5 61 aa4.73□□□□□ -1.65
U2AF1-212ENST00000496462 TRAV22A0A0B4J277 110 aa4.73□□□□□ -1.65
U2AF1-212ENST00000496462 H3BPC8 53 aa4.73□□□□□ -1.65
U2AF1-212ENST00000496462 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
U2AF1-212ENST00000496462 TNXBP22105 4242 aa4.72□□□□□ -1.65
U2AF1-212ENST00000496462 H0Y9P7 68 aa4.72□□□□□ -1.65
U2AF1-212ENST00000496462 C20orf166-AS1Q96NR2 134 aa4.72□□□□□ -1.65
U2AF1-212ENST00000496462 A8MUU9 505 aa4.72□□□□□ -1.65
U2AF1-212ENST00000496462 PMAIP1Q13794 54 aa4.72□□□□□ -1.65
U2AF1-212ENST00000496462 RNF213Q63HN8 5207 aa4.7□□□□□ -1.66
U2AF1-212ENST00000496462 A0A087WVE0 104 aa4.69□□□□□ -1.66
U2AF1-212ENST00000496462 LINC00208Q96KT6 92 aa4.69□□□□□ -1.66
U2AF1-212ENST00000496462 TRAV7A0A075B6U4 112 aa4.68□□□□□ -1.66
U2AF1-212ENST00000496462 Q8N9P0 234 aaPredicted RBP4.68□□□□□ -1.66
U2AF1-212ENST00000496462 C1orf64Q8NEQ6 169 aa4.67□□□□□ -1.66
U2AF1-212ENST00000496462 SPINK7P58062 85 aa4.66□□□□□ -1.66
U2AF1-212ENST00000496462 M0R2T5 61 aa4.65□□□□□ -1.67
U2AF1-212ENST00000496462 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
U2AF1-212ENST00000496462 SERP2Q8N6R1 65 aa4.63□□□□□ -1.67
U2AF1-212ENST00000496462 SPTSSBQ8NFR3 76 aa4.63□□□□□ -1.67
U2AF1-212ENST00000496462 LPAP08519 4548 aa4.63□□□□□ -1.67
U2AF1-212ENST00000496462 CHKB-CPT1BH3BT56 60 aa4.63□□□□□ -1.67
U2AF1-212ENST00000496462 COX7CP15954 63 aa4.63□□□□□ -1.67
U2AF1-212ENST00000496462 NOTCH2NLQ7Z3S9 236 aa4.63□□□□□ -1.67
U2AF1-212ENST00000496462 NDUFC1O43677 76 aa4.6□□□□□ -1.67
U2AF1-212ENST00000496462 Q5W150 140 aa4.59□□□□□ -1.67
U2AF1-212ENST00000496462 KRTAP16-1A8MUX0 517 aa4.58□□□□□ -1.68
U2AF1-212ENST00000496462 C20orf197Q8N268 126 aa4.58□□□□□ -1.68
U2AF1-212ENST00000496462 A8MUN3 132 aa4.56□□□□□ -1.68
U2AF1-212ENST00000496462 OCR1Q9BZK8 76 aa4.54□□□□□ -1.68
U2AF1-212ENST00000496462 ACYP2P14621 99 aa4.53□□□□□ -1.68
U2AF1-212ENST00000496462 TMEM258P61165 79 aa4.53□□□□□ -1.68
U2AF1-212ENST00000496462 MUC2Q02817 5179 aa4.53□□□□□ -1.68
U2AF1-212ENST00000496462 CYP4F30PQ9H0H9 118 aa4.53□□□□□ -1.68
U2AF1-212ENST00000496462 SNURFQ9Y675 71 aa4.51□□□□□ -1.69
U2AF1-212ENST00000496462 H1FX-AS1Q4G0G2 97 aa4.5□□□□□ -1.69
U2AF1-212ENST00000496462 H7BZZ5 65 aa4.49□□□□□ -1.69
U2AF1-212ENST00000496462 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
U2AF1-212ENST00000496462 CSAG1Q6PB30 78 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms