RNA–Protein interactions for RNA: ENST00000496206.5

NEPRO-223, Transcript of nucleolus and neural progenitor protein, human

TSL 5

Gene NEPRO, Length 751 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-223	ENST00000496206	COX6C	P09669	75 aa		4.48	□□□□□ -1.69
NEPRO-223	ENST00000496206	LINC00313	P59037	77 aa		4.48	□□□□□ -1.69
NEPRO-223	ENST00000496206	TMEM256-PLSCR3	K7ERE1	68 aa		4.47	□□□□□ -1.69
NEPRO-223	ENST00000496206	CCK	P06307	115 aa		4.47	□□□□□ -1.69
NEPRO-223	ENST00000496206	PYY3	Q5JQD4	70 aa		4.47	□□□□□ -1.69
NEPRO-223	ENST00000496206	KRTAP16-1	A8MUX0	517 aa		4.46	□□□□□ -1.7
NEPRO-223	ENST00000496206	TRAC	P01848	142 aa		4.46	□□□□□ -1.7
NEPRO-223	ENST00000496206	DEFB116	Q30KQ4	102 aa		4.46	□□□□□ -1.7
NEPRO-223	ENST00000496206	KRTAP19-4	Q3LI73	84 aa		4.46	□□□□□ -1.7
NEPRO-223	ENST00000496206	LINC00472	Q9H8W2	130 aa		4.45	□□□□□ -1.7
NEPRO-223	ENST00000496206	IGHV6-1	A0A0B4J1U7	121 aa		4.44	□□□□□ -1.7
NEPRO-223	ENST00000496206	FAM236D	A0A1B0GTK5	79 aa		4.44	□□□□□ -1.7
NEPRO-223	ENST00000496206	FAM236C	P0DP71	79 aa		4.44	□□□□□ -1.7
NEPRO-223	ENST00000496206	UBE2V1	Q13404	147 aa		4.44	□□□□□ -1.7
NEPRO-223	ENST00000496206	NOTCH2NL	Q7Z3S9	236 aa		4.44	□□□□□ -1.7
NEPRO-223	ENST00000496206	VPS25	Q9BRG1	176 aa		4.43	□□□□□ -1.7
NEPRO-223	ENST00000496206	UQCR10	Q9UDW1	63 aa		4.43	□□□□□ -1.7
NEPRO-223	ENST00000496206	SCGB1C2	P0DMR2	95 aa		4.42	□□□□□ -1.7
NEPRO-223	ENST00000496206		A0A1B0GVX0	72 aa		4.41	□□□□□ -1.7
NEPRO-223	ENST00000496206	RBM3	P98179	157 aa	Known RBP	4.41	□□□□□ -1.7
NEPRO-223	ENST00000496206	DSCR8	Q96T75	97 aa		4.41	□□□□□ -1.7
NEPRO-223	ENST00000496206	RBM12B-AS1	Q9P1G2	102 aa		4.41	□□□□□ -1.7
NEPRO-223	ENST00000496206	C8orf87	E5RJ46	101 aa		4.4	□□□□□ -1.71
NEPRO-223	ENST00000496206	TMA7	Q9Y2S6	64 aa	Known RBP	4.4	□□□□□ -1.71
NEPRO-223	ENST00000496206	USH2A	O75445	5202 aa		4.4	□□□□□ -1.71
NEPRO-223	ENST00000496206	HRES1	P13985	223 aa		4.39	□□□□□ -1.71
NEPRO-223	ENST00000496206	MPLKIP	Q8TAP9	179 aa		4.39	□□□□□ -1.71
NEPRO-223	ENST00000496206		C9JAW5	83 aa		4.38	□□□□□ -1.71
NEPRO-223	ENST00000496206	SSPO	A2VEC9	5147 aa		4.38	□□□□□ -1.71
NEPRO-223	ENST00000496206		J3KT08	172 aa		4.37	□□□□□ -1.71
NEPRO-223	ENST00000496206	BAALC-AS2	P0C853	105 aa		4.37	□□□□□ -1.71
NEPRO-223	ENST00000496206	C21orf62-AS1	Q17RA5	79 aa		4.37	□□□□□ -1.71
NEPRO-223	ENST00000496206	MT2A	P02795	61 aa		4.36	□□□□□ -1.71
NEPRO-223	ENST00000496206		Q6ZQT0	140 aa		4.35	□□□□□ -1.71
NEPRO-223	ENST00000496206	ZCCHC13	Q8WW36	166 aa	Known RBP	4.35	□□□□□ -1.71
NEPRO-223	ENST00000496206	NDUFB1	O75438	58 aa		4.34	□□□□□ -1.71
NEPRO-223	ENST00000496206	MTURN	Q8N3F0	131 aa		4.34	□□□□□ -1.71
NEPRO-223	ENST00000496206	MT1F	P04733	61 aa		4.33	□□□□□ -1.72
NEPRO-223	ENST00000496206	ATXN8	Q156A1	80 aa		4.33	□□□□□ -1.72
NEPRO-223	ENST00000496206	NAA38	Q9BRA0	125 aa	Known RBP	4.33	□□□□□ -1.72
NEPRO-223	ENST00000496206	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.32	□□□□□ -1.72
NEPRO-223	ENST00000496206		M0R143	59 aa		4.32	□□□□□ -1.72
NEPRO-223	ENST00000496206	SPINK7	P58062	85 aa		4.32	□□□□□ -1.72
NEPRO-223	ENST00000496206	KRTAP10-10	P60014	251 aa		4.32	□□□□□ -1.72
NEPRO-223	ENST00000496206	LOC110117498	A0A087WWA1	95 aa		4.31	□□□□□ -1.72
NEPRO-223	ENST00000496206		A8MWP4	228 aa		4.31	□□□□□ -1.72
NEPRO-223	ENST00000496206	LYRM7	Q5U5X0	104 aa		4.31	□□□□□ -1.72
NEPRO-223	ENST00000496206		Q8N9P0	234 aa	Predicted RBP	4.31	□□□□□ -1.72
NEPRO-223	ENST00000496206	C8orf17	Q9NRJ1	99 aa		4.31	□□□□□ -1.72
NEPRO-223	ENST00000496206		A0A1B0GW54	56 aa		4.3	□□□□□ -1.72
NEPRO-223	ENST00000496206	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.3	□□□□□ -1.72
NEPRO-223	ENST00000496206	IGKV3D-7	A0A0C4DH55	119 aa		4.29	□□□□□ -1.72
NEPRO-223	ENST00000496206	PDE6G	P18545	87 aa		4.29	□□□□□ -1.72
NEPRO-223	ENST00000496206	WFDC13	Q8IUB5	93 aa		4.29	□□□□□ -1.72
NEPRO-223	ENST00000496206	C14orf132	Q9NPU4	83 aa		4.29	□□□□□ -1.72
NEPRO-223	ENST00000496206		Q6ZVQ6	151 aa		4.27	□□□□□ -1.73
NEPRO-223	ENST00000496206	NREP	Q16612	68 aa		4.26	□□□□□ -1.73
NEPRO-223	ENST00000496206	PRR15	Q8IV56	129 aa		4.26	□□□□□ -1.73
NEPRO-223	ENST00000496206	SMIM6	P0DI80	62 aa		4.24	□□□□□ -1.73
NEPRO-223	ENST00000496206	TMEM254	Q8TBM7	123 aa		4.24	□□□□□ -1.73
NEPRO-223	ENST00000496206	MMP24-AS1	A0A0U1RRL7	71 aa		4.23	□□□□□ -1.73
NEPRO-223	ENST00000496206	BATF	Q16520	125 aa		4.23	□□□□□ -1.73
NEPRO-223	ENST00000496206	MRPL34	Q9BQ48	92 aa	Known RBP	4.23	□□□□□ -1.73
NEPRO-223	ENST00000496206	hDV103S1	A0JD37	113 aa		4.21	□□□□□ -1.74
NEPRO-223	ENST00000496206	TSTD3	H0UI37	97 aa		4.21	□□□□□ -1.74
NEPRO-223	ENST00000496206		K7EQZ3	153 aa		4.21	□□□□□ -1.74
NEPRO-223	ENST00000496206	NDUFS5	O43920	106 aa		4.21	□□□□□ -1.74
NEPRO-223	ENST00000496206		H3BT86	120 aa		4.19	□□□□□ -1.74
NEPRO-223	ENST00000496206	C9orf118	A6NHY6	69 aa		4.18	□□□□□ -1.74
NEPRO-223	ENST00000496206	BPY2	O14599	106 aa		4.18	□□□□□ -1.74
NEPRO-223	ENST00000496206	H1FX-AS1	Q4G0G2	97 aa		4.18	□□□□□ -1.74
NEPRO-223	ENST00000496206	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.18	□□□□□ -1.74
NEPRO-223	ENST00000496206	MACF1	Q9UPN3	7388 aa	Known RBP	4.17	□□□□□ -1.74
NEPRO-223	ENST00000496206	IGKV2D-30	A0A075B6S6	120 aa		4.17	□□□□□ -1.74
NEPRO-223	ENST00000496206		A0A1W2PPM0	123 aa		4.17	□□□□□ -1.74
NEPRO-223	ENST00000496206	IGKV2-30	P06310	120 aa		4.17	□□□□□ -1.74
NEPRO-223	ENST00000496206	LINC00846	Q9NV44	126 aa		4.17	□□□□□ -1.74
NEPRO-223	ENST00000496206		H3BS24	57 aa		4.16	□□□□□ -1.74
NEPRO-223	ENST00000496206	C7orf65	Q6ZTY9	151 aa		4.16	□□□□□ -1.74
NEPRO-223	ENST00000496206	TAX1BP3	O14907	124 aa		4.15	□□□□□ -1.75
NEPRO-223	ENST00000496206	KRTAP19-6	Q3LI70	58 aa		4.15	□□□□□ -1.75
NEPRO-223	ENST00000496206		Q5W150	140 aa		4.14	□□□□□ -1.75
NEPRO-223	ENST00000496206	CASC2	Q6XLA1	102 aa		4.14	□□□□□ -1.75
NEPRO-223	ENST00000496206		Q8N9L7	120 aa		4.14	□□□□□ -1.75
NEPRO-223	ENST00000496206	HCG22	E2RYF7	251 aa		4.12	□□□□□ -1.75
NEPRO-223	ENST00000496206	SPCS1	Q9Y6A9	102 aa		4.11	□□□□□ -1.75
NEPRO-223	ENST00000496206	SYNE2	Q8WXH0	6885 aa	Known RBP	4.11	□□□□□ -1.75
NEPRO-223	ENST00000496206	CXCL6	P80162	114 aa		4.1	□□□□□ -1.75
NEPRO-223	ENST00000496206	C4orf26	Q17RF5	130 aa		4.1	□□□□□ -1.75
NEPRO-223	ENST00000496206	LOC105371267	A0A1B0GV96	52 aa		4.08	□□□□□ -1.76
NEPRO-223	ENST00000496206	UBL5	Q9BZL1	73 aa		4.07	□□□□□ -1.76
NEPRO-223	ENST00000496206	C5orf47	Q569G3	176 aa		4.05	□□□□□ -1.76
NEPRO-223	ENST00000496206	FAM236A	A0A1B0GUQ0	79 aa		4.03	□□□□□ -1.76
NEPRO-223	ENST00000496206	FAM236B	A0A1B0GV22	79 aa		4.03	□□□□□ -1.76
NEPRO-223	ENST00000496206	COL5A1-AS1	Q5SY13	56 aa		4.03	□□□□□ -1.76
NEPRO-223	ENST00000496206	PRO0461	Q9UI25	63 aa		4.03	□□□□□ -1.76
NEPRO-223	ENST00000496206		S4R3F8	94 aa		4.03	□□□□□ -1.76
NEPRO-223	ENST00000496206	KRTAP3-1	Q9BYR8	98 aa		4.02	□□□□□ -1.77
NEPRO-223	ENST00000496206		K7EP34	96 aa		4.01	□□□□□ -1.77
NEPRO-223	ENST00000496206	C1orf64	Q8NEQ6	169 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms