RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 TEX15Q9BXT5 2789 aa0.88□□□□□ -2.27
CLK1-214ENST00000496205 DOPEY1Q5JWR5 2465 aa0.88□□□□□ -2.27
CLK1-214ENST00000496205 ETDCA0A1B0GVM5 59 aa0.88□□□□□ -2.27
CLK1-214ENST00000496205 CPSF4LA6NMK7 179 aaKnown RBP0.88□□□□□ -2.27
CLK1-214ENST00000496205 LOC730098B7Z3J9 87 aa0.88□□□□□ -2.27
CLK1-214ENST00000496205 NDUFA3O95167 84 aa0.88□□□□□ -2.27
CLK1-214ENST00000496205 FASNP49327 2511 aaKnown RBP0.88□□□□□ -2.27
CLK1-214ENST00000496205 ANKHD1Q8IWZ3 2542 aaKnown RBP0.88□□□□□ -2.27
CLK1-214ENST00000496205 TENM4Q6N022 2769 aa0.88□□□□□ -2.27
CLK1-214ENST00000496205 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.88□□□□□ -2.272e-8■■■■□ 25.2
CLK1-214ENST00000496205 USP9YO00507 2555 aaPredicted RBP0.88□□□□□ -2.27
CLK1-214ENST00000496205 IGF2RP11717 2491 aa0.88□□□□□ -2.27
CLK1-214ENST00000496205 NIPBLQ6KC79 2804 aaeCLIP0.88□□□□□ -2.27
CLK1-214ENST00000496205 UNC79Q9P2D8 2635 aa0.87□□□□□ -2.27
CLK1-214ENST00000496205 ZFYVE26Q68DK2 2539 aa0.87□□□□□ -2.27
CLK1-214ENST00000496205 PDZD2O15018 2839 aa0.87□□□□□ -2.27
CLK1-214ENST00000496205 COX6B1P14854 86 aa0.87□□□□□ -2.27
CLK1-214ENST00000496205 PKDREJQ9NTG1 2253 aa0.87□□□□□ -2.27
CLK1-214ENST00000496205 DNAH7Q8WXX0 4024 aa0.87□□□□□ -2.27
CLK1-214ENST00000496205 ANKRD17O75179 2603 aaKnown RBP0.86□□□□□ -2.27
CLK1-214ENST00000496205 WNK2Q9Y3S1 2297 aa0.86□□□□□ -2.27
CLK1-214ENST00000496205 NSD1Q96L73 2696 aaPredicted RBP0.86□□□□□ -2.27
CLK1-214ENST00000496205 NAV2Q8IVL1 2488 aa0.86□□□□□ -2.27
CLK1-214ENST00000496205 K7EQZ3 153 aa0.86□□□□□ -2.27
CLK1-214ENST00000496205 CRIP1P50238 77 aa0.86□□□□□ -2.27
CLK1-214ENST00000496205 Q5VSD8 79 aa0.86□□□□□ -2.27
CLK1-214ENST00000496205 KCNQ1DNQ9H478 68 aa0.86□□□□□ -2.27
CLK1-214ENST00000496205 TNCP24821 2201 aa0.86□□□□□ -2.27
CLK1-214ENST00000496205 MYO9AB2RTY4 2548 aa0.86□□□□□ -2.27
CLK1-214ENST00000496205 FBN2P35556 2912 aa0.85□□□□□ -2.27
CLK1-214ENST00000496205 ANK3Q12955 4377 aaKnown RBP0.85□□□□□ -2.27
CLK1-214ENST00000496205 CREBBPQ92793 2442 aa0.85□□□□□ -2.27
CLK1-214ENST00000496205 SPG11Q96JI7 2443 aa0.85□□□□□ -2.27
CLK1-214ENST00000496205 SERF2P84101 59 aa0.85□□□□□ -2.27
CLK1-214ENST00000496205 TFF3Q07654 80 aa0.85□□□□□ -2.27
CLK1-214ENST00000496205 LELP1Q5T871 98 aa0.85□□□□□ -2.27
CLK1-214ENST00000496205 CSPG4Q6UVK1 2322 aa0.85□□□□□ -2.27
CLK1-214ENST00000496205 ALMS1Q8TCU4 4167 aa0.85□□□□□ -2.27
CLK1-214ENST00000496205 PKD1L1Q8TDX9 2849 aa0.85□□□□□ -2.27
CLK1-214ENST00000496205 CSMD3Q7Z407 3707 aa0.85□□□□□ -2.27
CLK1-214ENST00000496205 ITPR3Q14573 2671 aa0.84□□□□□ -2.27
CLK1-214ENST00000496205 TLN2Q9Y4G6 2542 aa0.84□□□□□ -2.27
CLK1-214ENST00000496205 ABCA12Q86UK0 2595 aa0.84□□□□□ -2.27
CLK1-214ENST00000496205 DOPEY2Q9Y3R5 2298 aa0.84□□□□□ -2.27
CLK1-214ENST00000496205 MAST4O15021 2626 aa0.84□□□□□ -2.27
CLK1-214ENST00000496205 DEFB114Q30KQ6 69 aa0.84□□□□□ -2.27
CLK1-214ENST00000496205 CDKN2A-AS1Q9UH64 79 aa0.84□□□□□ -2.27
CLK1-214ENST00000496205 VWFP04275 2813 aa0.84□□□□□ -2.28
CLK1-214ENST00000496205 SETXQ7Z333 2677 aaKnown RBP0.84□□□□□ -2.28
CLK1-214ENST00000496205 FLNBO75369 2602 aaKnown RBP0.84□□□□□ -2.28
CLK1-214ENST00000496205 NBEAL1Q6ZS30 2694 aa0.83□□□□□ -2.28
CLK1-214ENST00000496205 AKAP6Q13023 2319 aa0.83□□□□□ -2.28
CLK1-214ENST00000496205 HIVEP1P15822 2718 aa0.83□□□□□ -2.28
CLK1-214ENST00000496205 HECTD4Q9Y4D8 3996 aa0.83□□□□□ -2.28
CLK1-214ENST00000496205 ABCA2Q9BZC7 2435 aa0.83□□□□□ -2.28
CLK1-214ENST00000496205 LINC01546A6NGU7 62 aa0.83□□□□□ -2.28
CLK1-214ENST00000496205 CCL22O00626 93 aa0.83□□□□□ -2.28
CLK1-214ENST00000496205 CD52P31358 61 aa0.83□□□□□ -2.28
CLK1-214ENST00000496205 LINC00158P58513 81 aa0.83□□□□□ -2.28
CLK1-214ENST00000496205 ZNF462Q96JM2 2506 aa0.83□□□□□ -2.28
CLK1-214ENST00000496205 FLNAP21333 2647 aaKnown RBP0.83□□□□□ -2.28
CLK1-214ENST00000496205 PRKDCP78527 4128 aaKnown RBP0.82□□□□□ -2.28
CLK1-214ENST00000496205 DEFB131BA0A096LNP1 70 aa0.82□□□□□ -2.28
CLK1-214ENST00000496205 COX14Q96I36 57 aa0.82□□□□□ -2.28
CLK1-214ENST00000496205 MRPL34Q9BQ48 92 aaKnown RBP0.82□□□□□ -2.28
CLK1-214ENST00000496205 DNHD1Q96M86 4753 aa0.82□□□□□ -2.28
CLK1-214ENST00000496205 COL7A1Q02388 2944 aa0.82□□□□□ -2.28
CLK1-214ENST00000496205 MTORP42345 2549 aa0.82□□□□□ -2.28
CLK1-214ENST00000496205 TEP1Q99973 2627 aaKnown RBP0.81□□□□□ -2.28
CLK1-214ENST00000496205 HECTD1Q9ULT8 2610 aa0.81□□□□□ -2.28
CLK1-214ENST00000496205 FRAS1Q86XX4 4008 aa0.81□□□□□ -2.28
CLK1-214ENST00000496205 DYNC2H1Q8NCM8 4307 aaKnown RBP0.81□□□□□ -2.28
CLK1-214ENST00000496205 WNK1Q9H4A3 2382 aa0.81□□□□□ -2.28
CLK1-214ENST00000496205 H0YGX0 51 aa0.81□□□□□ -2.28
CLK1-214ENST00000496205 SNRPGP62308 76 aaKnown RBP0.81□□□□□ -2.28
CLK1-214ENST00000496205 COX6B2Q6YFQ2 88 aa0.81□□□□□ -2.28
CLK1-214ENST00000496205 LINC00308Q8TCZ7 52 aa0.81□□□□□ -2.28
CLK1-214ENST00000496205 ACANP16112 2415 aa0.81□□□□□ -2.28
CLK1-214ENST00000496205 CCDC168Q8NDH2 2452 aa0.81□□□□□ -2.28
CLK1-214ENST00000496205 KMT2AQ03164 3969 aa0.81□□□□□ -2.28
CLK1-214ENST00000496205 POLQO75417 2590 aa0.81□□□□□ -2.28
CLK1-214ENST00000496205 SONP18583 2426 aaKnown RBP0.8□□□□□ -2.28
CLK1-214ENST00000496205 AHNAK2Q8IVF2 5795 aa0.8□□□□□ -2.28
CLK1-214ENST00000496205 SETD2Q9BYW2 2564 aaPredicted RBP0.8□□□□□ -2.28
CLK1-214ENST00000496205 ATRQ13535 2644 aa0.8□□□□□ -2.28
CLK1-214ENST00000496205 DNAH6Q9C0G6 4158 aa0.8□□□□□ -2.28
CLK1-214ENST00000496205 MRPL33O75394 65 aaKnown RBP0.8□□□□□ -2.28
CLK1-214ENST00000496205 DEFB106AQ8N104 65 aa0.8□□□□□ -2.28
CLK1-214ENST00000496205 APLNQ9ULZ1 77 aa0.8□□□□□ -2.28
CLK1-214ENST00000496205 U3KQA8 63 aa0.8□□□□□ -2.28
CLK1-214ENST00000496205 COL6A5A8TX70 2615 aa0.79□□□□□ -2.28
CLK1-214ENST00000496205 H0YAA0 97 aa0.79□□□□□ -2.28
CLK1-214ENST00000496205 C2CD3Q4AC94 2353 aa0.79□□□□□ -2.28
CLK1-214ENST00000496205 STAB1Q9NY15 2570 aa0.79□□□□□ -2.28
CLK1-214ENST00000496205 TGP01266 2768 aa0.79□□□□□ -2.28
CLK1-214ENST00000496205 PLECQ15149 4684 aaKnown RBP0.79□□□□□ -2.28
CLK1-214ENST00000496205 F8P00451 2351 aa0.78□□□□□ -2.28
CLK1-214ENST00000496205 MINOS1Q5TGZ0 78 aa0.78□□□□□ -2.28
CLK1-214ENST00000496205 SPINK6Q6UWN8 80 aa0.78□□□□□ -2.28
CLK1-214ENST00000496205 TMEM167BQ9NRX6 74 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms