RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SND1-IT1Q9HBX3 110 aa5.35□□□□□ -1.55
SMARCAL1-213ENST00000496037 Q6JHZ5 121 aa5.34□□□□□ -1.55
SMARCAL1-213ENST00000496037 SERP2Q8N6R1 65 aa5.34□□□□□ -1.55
SMARCAL1-213ENST00000496037 CLEC2BQ92478 149 aa5.34□□□□□ -1.55
SMARCAL1-213ENST00000496037 CDC42SE2Q9NRR3 84 aa5.34□□□□□ -1.55
SMARCAL1-213ENST00000496037 C6orf48Q9UBA6 75 aa5.34□□□□□ -1.55
SMARCAL1-213ENST00000496037 COX6B2Q6YFQ2 88 aa5.33□□□□□ -1.56
SMARCAL1-213ENST00000496037 SMCR5Q8TEV8 140 aa5.33□□□□□ -1.56
SMARCAL1-213ENST00000496037 NDUFA12Q9UI09 145 aa5.33□□□□□ -1.56
SMARCAL1-213ENST00000496037 TRAV13-1A0A0B4J241 112 aa5.32□□□□□ -1.56
SMARCAL1-213ENST00000496037 hADV29S1A0JD25 119 aa5.32□□□□□ -1.56
SMARCAL1-213ENST00000496037 RPL39P62891 51 aaKnown RBP5.32□□□□□ -1.56
SMARCAL1-213ENST00000496037 MRPS36P82909 103 aaKnown RBP5.32□□□□□ -1.56
SMARCAL1-213ENST00000496037 C9orf129Q5T035 196 aaKnown RBP5.32□□□□□ -1.56
SMARCAL1-213ENST00000496037 C22orf24Q9Y442 160 aa5.32□□□□□ -1.56
SMARCAL1-213ENST00000496037 A0A1B0GW54 56 aa5.31□□□□□ -1.56
SMARCAL1-213ENST00000496037 UNQ6190/PRO20217Q6UXQ8 127 aa5.31□□□□□ -1.56
SMARCAL1-213ENST00000496037 BAALC-AS2P0C853 105 aa5.3□□□□□ -1.56
SMARCAL1-213ENST00000496037 S100A7L2Q5SY68 101 aa5.3□□□□□ -1.56
SMARCAL1-213ENST00000496037 NEBP20929 6669 aa5.29□□□□□ -1.56
SMARCAL1-213ENST00000496037 A8MUN3 132 aa5.29□□□□□ -1.56
SMARCAL1-213ENST00000496037 ATP5EP2Q5VTU8 51 aa5.29□□□□□ -1.56
SMARCAL1-213ENST00000496037 C8orf17Q9NRJ1 99 aa5.29□□□□□ -1.56
SMARCAL1-213ENST00000496037 BPY2O14599 106 aa5.28□□□□□ -1.56
SMARCAL1-213ENST00000496037 DNAL4O96015 105 aa5.28□□□□□ -1.56
SMARCAL1-213ENST00000496037 PCOTHQ58A44 107 aa5.28□□□□□ -1.56
SMARCAL1-213ENST00000496037 RNASE13Q5GAN3 156 aaKnown RBP5.28□□□□□ -1.56
SMARCAL1-213ENST00000496037 Q5XG85 94 aa5.28□□□□□ -1.56
SMARCAL1-213ENST00000496037 NDUFAF8A1L188 74 aa5.26□□□□□ -1.57
SMARCAL1-213ENST00000496037 IGKV2-30P06310 120 aa5.26□□□□□ -1.57
SMARCAL1-213ENST00000496037 NPC2P61916 151 aa5.26□□□□□ -1.57
SMARCAL1-213ENST00000496037 HRCT1Q6UXD1 115 aa5.26□□□□□ -1.57
SMARCAL1-213ENST00000496037 LINC00308Q8TCZ7 52 aa5.26□□□□□ -1.57
SMARCAL1-213ENST00000496037 SERP1Q9Y6X1 66 aa5.26□□□□□ -1.57
SMARCAL1-213ENST00000496037 KRTAP13-1Q8IUC0 172 aa5.25□□□□□ -1.57
SMARCAL1-213ENST00000496037 TRAV13-2A0A0B4J235 113 aa5.24□□□□□ -1.57
SMARCAL1-213ENST00000496037 OBSCN-AS1Q96MR7 158 aa5.24□□□□□ -1.57
SMARCAL1-213ENST00000496037 DSCR8Q96T75 97 aa5.24□□□□□ -1.57
SMARCAL1-213ENST00000496037 TRBV10-3A0A0K0K1G6 114 aa5.23□□□□□ -1.57
SMARCAL1-213ENST00000496037 H0YGX0 51 aa5.23□□□□□ -1.57
SMARCAL1-213ENST00000496037 SPINK1P00995 79 aa5.23□□□□□ -1.57
SMARCAL1-213ENST00000496037 XAGE1AQ9HD64 81 aa5.23□□□□□ -1.57
SMARCAL1-213ENST00000496037 LINC00846Q9NV44 126 aa5.23□□□□□ -1.57
SMARCAL1-213ENST00000496037 IGKV3D-7A0A0C4DH55 119 aa5.21□□□□□ -1.58
SMARCAL1-213ENST00000496037 A0A1B0GVX0 72 aa5.21□□□□□ -1.58
SMARCAL1-213ENST00000496037 K7ERS5 55 aa5.21□□□□□ -1.58
SMARCAL1-213ENST00000496037 ATP5EP56381 51 aaPredicted RBP5.21□□□□□ -1.58
SMARCAL1-213ENST00000496037 KRTAP6-3Q3LI67 103 aa5.21□□□□□ -1.58
SMARCAL1-213ENST00000496037 KTN1-AS1Q86SY8 53 aa5.21□□□□□ -1.58
SMARCAL1-213ENST00000496037 LINC00167Q96N53 147 aa5.21□□□□□ -1.58
SMARCAL1-213ENST00000496037 CYSTM1Q9H1C7 97 aa5.21□□□□□ -1.58
SMARCAL1-213ENST00000496037 PRLHP81277 87 aa5.2□□□□□ -1.58
SMARCAL1-213ENST00000496037 LUZP6Q538Z0 58 aa5.2□□□□□ -1.58
SMARCAL1-213ENST00000496037 LCA10Q71F78 164 aa5.19□□□□□ -1.58
SMARCAL1-213ENST00000496037 PRR15Q8IV56 129 aa5.19□□□□□ -1.58
SMARCAL1-213ENST00000496037 TRAV7A0A075B6U4 112 aa5.18□□□□□ -1.58
SMARCAL1-213ENST00000496037 JMJD7-PLA2G4BH0Y9G9 81 aa5.18□□□□□ -1.58
SMARCAL1-213ENST00000496037 NDUFC1O43677 76 aa5.18□□□□□ -1.58
SMARCAL1-213ENST00000496037 CCKP06307 115 aa5.18□□□□□ -1.58
SMARCAL1-213ENST00000496037 SOSTDC1Q6X4U4 206 aa5.18□□□□□ -1.58
SMARCAL1-213ENST00000496037 Q8N9P0 234 aaPredicted RBP5.18□□□□□ -1.58
SMARCAL1-213ENST00000496037 CDKN2A-AS1Q9UH64 79 aa5.18□□□□□ -1.58
SMARCAL1-213ENST00000496037 ZNF625Q96I27 306 aaPredicted RBP5.17□□□□□ -1.58
SMARCAL1-213ENST00000496037 C14orf132Q9NPU4 83 aa5.17□□□□□ -1.58
SMARCAL1-213ENST00000496037 RPS29P62273 56 aaKnown RBP5.16□□□□□ -1.58
SMARCAL1-213ENST00000496037 KRTAP20-1Q3LI63 56 aa5.16□□□□□ -1.58
SMARCAL1-213ENST00000496037 ORMDL1Q9P0S3 153 aa5.16□□□□□ -1.58
SMARCAL1-213ENST00000496037 IGKV2-28A0A075B6P5 120 aa5.15□□□□□ -1.59
SMARCAL1-213ENST00000496037 A0A087WVE0 104 aa5.15□□□□□ -1.59
SMARCAL1-213ENST00000496037 IGKV2D-28P01615 120 aa5.15□□□□□ -1.59
SMARCAL1-213ENST00000496037 KLKP1Q107X0 134 aa5.15□□□□□ -1.59
SMARCAL1-213ENST00000496037 ZNF73O43830 326 aaPredicted RBP5.14□□□□□ -1.59
SMARCAL1-213ENST00000496037 C20orf197Q8N268 126 aa5.14□□□□□ -1.59
SMARCAL1-213ENST00000496037 HIGD2AQ9BW72 106 aa5.14□□□□□ -1.59
SMARCAL1-213ENST00000496037 UBL5Q9BZL1 73 aa5.14□□□□□ -1.59
SMARCAL1-213ENST00000496037 H7BZZ5 65 aa5.13□□□□□ -1.59
SMARCAL1-213ENST00000496037 SMIM11BQ8TCY0 68 aa5.13□□□□□ -1.59
SMARCAL1-213ENST00000496037 TOMM7Q9P0U1 55 aa5.13□□□□□ -1.59
SMARCAL1-213ENST00000496037 MUC12Q9UKN1 5478 aa5.12□□□□□ -1.59
SMARCAL1-213ENST00000496037 SPRR4Q96PI1 79 aa5.12□□□□□ -1.59
SMARCAL1-213ENST00000496037 TRAV23DV6A0A075B6W5 121 aa5.11□□□□□ -1.59
SMARCAL1-213ENST00000496037 H3BQ85 93 aa5.11□□□□□ -1.59
SMARCAL1-213ENST00000496037 MIR7-3HGQ8N6C7 128 aa5.11□□□□□ -1.59
SMARCAL1-213ENST00000496037 TRBV7-6A0A0J9YX20 115 aa5.1□□□□□ -1.59
SMARCAL1-213ENST00000496037 C9orf92A6NGG3 77 aa5.1□□□□□ -1.59
SMARCAL1-213ENST00000496037 TMEM256-PLSCR3K7ERE1 68 aa5.1□□□□□ -1.59
SMARCAL1-213ENST00000496037 NCR3O14931 201 aa5.1□□□□□ -1.59
SMARCAL1-213ENST00000496037 COX7B2Q8TF08 81 aa5.1□□□□□ -1.59
SMARCAL1-213ENST00000496037 M0R378 163 aa5.09□□□□□ -1.59
SMARCAL1-213ENST00000496037 ERC2-IT1O76042 136 aa5.09□□□□□ -1.59
SMARCAL1-213ENST00000496037 PDE6GP18545 87 aa5.09□□□□□ -1.59
SMARCAL1-213ENST00000496037 LOC110117498A0A087WWA1 95 aa5.08□□□□□ -1.6
SMARCAL1-213ENST00000496037 RBM3P98179 157 aaKnown RBP5.08□□□□□ -1.6
SMARCAL1-213ENST00000496037 Q8IZM0 81 aa5.08□□□□□ -1.6
SMARCAL1-213ENST00000496037 IGKV2D-30A0A075B6S6 120 aa5.07□□□□□ -1.6
SMARCAL1-213ENST00000496037 LINC00158P58513 81 aa5.07□□□□□ -1.6
SMARCAL1-213ENST00000496037 F8WEM9 126 aa5.06□□□□□ -1.6
SMARCAL1-213ENST00000496037 MOBPQ13875 183 aa5.06□□□□□ -1.6
SMARCAL1-213ENST00000496037 KRTAP19-6Q3LI70 58 aa5.05□□□□□ -1.6
SMARCAL1-213ENST00000496037 LINC01554Q52M75 96 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms