RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 C8orf87E5RJ46 101 aa3.63□□□□□ -1.83
VPS52-221ENST00000495755 J3KT08 172 aa3.62□□□□□ -1.83
VPS52-221ENST00000495755 HRES1P13985 223 aa3.62□□□□□ -1.83
VPS52-221ENST00000495755 C21orf62-AS1Q17RA5 79 aa3.62□□□□□ -1.83
VPS52-221ENST00000495755 Q6ZQT0 140 aa3.62□□□□□ -1.83
VPS52-221ENST00000495755 M0R143 59 aa3.61□□□□□ -1.83
VPS52-221ENST00000495755 LOC110117498A0A087WWA1 95 aa3.6□□□□□ -1.83
VPS52-221ENST00000495755 ATXN8Q156A1 80 aa3.6□□□□□ -1.83
VPS52-221ENST00000495755 NAA38Q9BRA0 125 aaKnown RBP3.6□□□□□ -1.83
VPS52-221ENST00000495755 RBM12B-AS1Q9P1G2 102 aa3.6□□□□□ -1.83
VPS52-221ENST00000495755 FAM236DA0A1B0GTK5 79 aa3.59□□□□□ -1.83
VPS52-221ENST00000495755 A0A1B0GW54 56 aa3.59□□□□□ -1.83
VPS52-221ENST00000495755 JMJD7-PLA2G4BH0Y9G9 81 aa3.59□□□□□ -1.83
VPS52-221ENST00000495755 FAM236CP0DP71 79 aa3.59□□□□□ -1.83
VPS52-221ENST00000495755 ZCCHC13Q8WW36 166 aaKnown RBP3.59□□□□□ -1.83
VPS52-221ENST00000495755 MT2AP02795 61 aa3.58□□□□□ -1.84
VPS52-221ENST00000495755 PDE6GP18545 87 aa3.58□□□□□ -1.84
VPS52-221ENST00000495755 Q8N9P0 234 aaPredicted RBP3.58□□□□□ -1.84
VPS52-221ENST00000495755 A8MWP4 228 aa3.57□□□□□ -1.84
VPS52-221ENST00000495755 NDUFB1O75438 58 aa3.57□□□□□ -1.84
VPS52-221ENST00000495755 SMIM6P0DI80 62 aa3.57□□□□□ -1.84
VPS52-221ENST00000495755 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
VPS52-221ENST00000495755 IGKV3D-7A0A0C4DH55 119 aa3.56□□□□□ -1.84
VPS52-221ENST00000495755 SPINK7P58062 85 aa3.56□□□□□ -1.84
VPS52-221ENST00000495755 C8orf17Q9NRJ1 99 aa3.56□□□□□ -1.84
VPS52-221ENST00000495755 MT1FP04733 61 aa3.55□□□□□ -1.84
VPS52-221ENST00000495755 C14orf132Q9NPU4 83 aa3.55□□□□□ -1.84
VPS52-221ENST00000495755 LYRM7Q5U5X0 104 aa3.54□□□□□ -1.84
VPS52-221ENST00000495755 NREPQ16612 68 aa3.53□□□□□ -1.84
VPS52-221ENST00000495755 Q6ZVQ6 151 aa3.53□□□□□ -1.84
VPS52-221ENST00000495755 PRR15Q8IV56 129 aa3.53□□□□□ -1.84
VPS52-221ENST00000495755 MTURNQ8N3F0 131 aa3.53□□□□□ -1.84
VPS52-221ENST00000495755 KRTAP9-3Q9BYQ3 159 aa3.53□□□□□ -1.84
VPS52-221ENST00000495755 TSTD3H0UI37 97 aa3.52□□□□□ -1.85
VPS52-221ENST00000495755 BATFQ16520 125 aa3.52□□□□□ -1.85
VPS52-221ENST00000495755 MMP24-AS1A0A0U1RRL7 71 aa3.51□□□□□ -1.85
VPS52-221ENST00000495755 C9orf118A6NHY6 69 aa3.51□□□□□ -1.85
VPS52-221ENST00000495755 LCE2BO14633 110 aa3.51□□□□□ -1.85
VPS52-221ENST00000495755 KRTAP10-10P60014 251 aa3.51□□□□□ -1.85
VPS52-221ENST00000495755 A0A1W2PPM0 123 aa3.5□□□□□ -1.85
VPS52-221ENST00000495755 H3BT86 120 aa3.5□□□□□ -1.85
VPS52-221ENST00000495755 TAX1BP3O14907 124 aa3.5□□□□□ -1.85
VPS52-221ENST00000495755 TMEM254Q8TBM7 123 aa3.5□□□□□ -1.85
VPS52-221ENST00000495755 MRPL34Q9BQ48 92 aaKnown RBP3.5□□□□□ -1.85
VPS52-221ENST00000495755 LOC105371267A0A1B0GV96 52 aa3.49□□□□□ -1.85
VPS52-221ENST00000495755 WFDC13Q8IUB5 93 aa3.49□□□□□ -1.85
VPS52-221ENST00000495755 K7EQZ3 153 aa3.48□□□□□ -1.85
VPS52-221ENST00000495755 hDV103S1A0JD37 113 aa3.47□□□□□ -1.85
VPS52-221ENST00000495755 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
VPS52-221ENST00000495755 BPY2O14599 106 aa3.46□□□□□ -1.86
VPS52-221ENST00000495755 Q5W150 140 aa3.45□□□□□ -1.86
VPS52-221ENST00000495755 KRTAP19-1Q8IUB9 90 aa3.45□□□□□ -1.86
VPS52-221ENST00000495755 NDUFS5O43920 106 aa3.44□□□□□ -1.86
VPS52-221ENST00000495755 SMCPP49901 116 aaPredicted RBP3.44□□□□□ -1.86
VPS52-221ENST00000495755 H1FX-AS1Q4G0G2 97 aa3.44□□□□□ -1.86
VPS52-221ENST00000495755 SPCS1Q9Y6A9 102 aa3.44□□□□□ -1.86
VPS52-221ENST00000495755 KRTAP9-7A8MTY7 169 aa3.43□□□□□ -1.86
VPS52-221ENST00000495755 Q8N9L7 120 aa3.43□□□□□ -1.86
VPS52-221ENST00000495755 IGKV2D-30A0A075B6S6 120 aa3.42□□□□□ -1.86
VPS52-221ENST00000495755 IGKV2-30P06310 120 aa3.42□□□□□ -1.86
VPS52-221ENST00000495755 CASC2Q6XLA1 102 aa3.42□□□□□ -1.86
VPS52-221ENST00000495755 C7orf65Q6ZTY9 151 aa3.41□□□□□ -1.86
VPS52-221ENST00000495755 PRO0461Q9UI25 63 aa3.41□□□□□ -1.86
VPS52-221ENST00000495755 HCG22E2RYF7 251 aa3.4□□□□□ -1.87
VPS52-221ENST00000495755 LINC00846Q9NV44 126 aa3.4□□□□□ -1.87
VPS52-221ENST00000495755 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.87
VPS52-221ENST00000495755 SYNE2Q8WXH0 6885 aaKnown RBP3.39□□□□□ -1.87
VPS52-221ENST00000495755 CXCL6P80162 114 aa3.39□□□□□ -1.87
VPS52-221ENST00000495755 KRTAP19-6Q3LI70 58 aa3.39□□□□□ -1.87
VPS52-221ENST00000495755 COL5A1-AS1Q5SY13 56 aa3.39□□□□□ -1.87
VPS52-221ENST00000495755 K7EP34 96 aa3.38□□□□□ -1.87
VPS52-221ENST00000495755 C4orf26Q17RF5 130 aa3.37□□□□□ -1.87
VPS52-221ENST00000495755 UBL5Q9BZL1 73 aa3.37□□□□□ -1.87
VPS52-221ENST00000495755 KRTAP3-1Q9BYR8 98 aa3.35□□□□□ -1.87
VPS52-221ENST00000495755 F8W1H4 67 aa3.32□□□□□ -1.88
VPS52-221ENST00000495755 C5orf47Q569G3 176 aa3.31□□□□□ -1.88
VPS52-221ENST00000495755 GTF2H5Q6ZYL4 71 aa3.31□□□□□ -1.88
VPS52-221ENST00000495755 TP53AIP1Q9HCN2 124 aa3.31□□□□□ -1.88
VPS52-221ENST00000495755 ETDBQ3ZM63 59 aa3.3□□□□□ -1.88
VPS52-221ENST00000495755 C1orf64Q8NEQ6 169 aa3.3□□□□□ -1.88
VPS52-221ENST00000495755 S4R3F8 94 aa3.3□□□□□ -1.88
VPS52-221ENST00000495755 LCA10Q71F78 164 aa3.29□□□□□ -1.88
VPS52-221ENST00000495755 CSAG1Q6PB30 78 aa3.28□□□□□ -1.88
VPS52-221ENST00000495755 CYP4F30PQ9H0H9 118 aa3.27□□□□□ -1.89
VPS52-221ENST00000495755 FAM236AA0A1B0GUQ0 79 aa3.26□□□□□ -1.89
VPS52-221ENST00000495755 FAM236BA0A1B0GV22 79 aa3.26□□□□□ -1.89
VPS52-221ENST00000495755 PCP4L1A6NKN8 68 aa3.26□□□□□ -1.89
VPS52-221ENST00000495755 SPRR2GQ9BYE4 73 aa3.26□□□□□ -1.89
VPS52-221ENST00000495755 MT1BP07438 61 aa3.25□□□□□ -1.89
VPS52-221ENST00000495755 KRTAP3-3Q9BYR6 98 aa3.25□□□□□ -1.89
VPS52-221ENST00000495755 ACYP1P07311 99 aa3.24□□□□□ -1.89
VPS52-221ENST00000495755 KRTAP19-8Q3LI54 63 aa3.24□□□□□ -1.89
VPS52-221ENST00000495755 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
VPS52-221ENST00000495755 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
VPS52-221ENST00000495755 A0A087WVE0 104 aa3.23□□□□□ -1.89
VPS52-221ENST00000495755 TRAV22A0A0B4J277 110 aa3.22□□□□□ -1.89
VPS52-221ENST00000495755 LOC101927531A0A1B0GV80 90 aa3.22□□□□□ -1.89
VPS52-221ENST00000495755 FAM240AA0A1B0GVK7 77 aa3.22□□□□□ -1.89
VPS52-221ENST00000495755 KLKP1Q107X0 134 aa3.22□□□□□ -1.89
VPS52-221ENST00000495755 Q5VV11 94 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms