RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 PRR26Q8N8Z3 221 aa11.54□□□□□ -0.56
LINC01558-202ENST00000495520 KRTAP4-5Q9BYR2 181 aa11.54□□□□□ -0.56
LINC01558-202ENST00000495520 HERC2O95714 4834 aa11.53□□□□□ -0.56
LINC01558-202ENST00000495520 C20orf197Q8N268 126 aa11.51□□□□□ -0.57
LINC01558-202ENST00000495520 CYSTM1Q9H1C7 97 aa11.51□□□□□ -0.57
LINC01558-202ENST00000495520 C8orf17Q9NRJ1 99 aa11.51□□□□□ -0.57
LINC01558-202ENST00000495520 SPINK1P00995 79 aa11.5□□□□□ -0.57
LINC01558-202ENST00000495520 C1orf195Q5TG92 126 aa11.5□□□□□ -0.57
LINC01558-202ENST00000495520 LIMD2Q9BT23 127 aa11.5□□□□□ -0.57
LINC01558-202ENST00000495520 KLKP1Q107X0 134 aa11.49□□□□□ -0.57
LINC01558-202ENST00000495520 C4orf48Q5BLP8 95 aa11.49□□□□□ -0.57
LINC01558-202ENST00000495520 RPS29P62273 56 aaKnown RBP11.48□□□□□ -0.57
LINC01558-202ENST00000495520 IGHV6-1A0A0B4J1U7 121 aa11.47□□□□□ -0.57
LINC01558-202ENST00000495520 hDV103S1A0JD37 113 aa11.47□□□□□ -0.57
LINC01558-202ENST00000495520 SPAG11AQ6PDA7 123 aa11.47□□□□□ -0.57
LINC01558-202ENST00000495520 LINC00304Q8N9R0 145 aa11.46□□□□□ -0.58
LINC01558-202ENST00000495520 TMEM254Q8TBM7 123 aa11.44□□□□□ -0.58
LINC01558-202ENST00000495520 A0A0U1RQV1 116 aa11.43□□□□□ -0.58
LINC01558-202ENST00000495520 NOTCH2NLQ7Z3S9 236 aa11.43□□□□□ -0.58
LINC01558-202ENST00000495520 C5orf47Q569G3 176 aa11.42□□□□□ -0.58
LINC01558-202ENST00000495520 C8orf87E5RJ46 101 aa11.4□□□□□ -0.59
LINC01558-202ENST00000495520 SNURFQ9Y675 71 aa11.39□□□□□ -0.59
LINC01558-202ENST00000495520 LRP1Q07954 4544 aaKnown RBP11.39□□□□□ -0.59
LINC01558-202ENST00000495520 ABCA13Q86UQ4 5058 aa11.38□□□□□ -0.59
LINC01558-202ENST00000495520 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
LINC01558-202ENST00000495520 MRPL34Q9BQ48 92 aaKnown RBP11.36□□□□□ -0.59
LINC01558-202ENST00000495520 H7BZZ5 65 aa11.36□□□□□ -0.59
LINC01558-202ENST00000495520 FAT3Q8TDW7 4589 aa11.35□□□□□ -0.59
LINC01558-202ENST00000495520 NDUFC1O43677 76 aa11.35□□□□□ -0.59
LINC01558-202ENST00000495520 ZCCHC13Q8WW36 166 aaKnown RBP11.35□□□□□ -0.59
LINC01558-202ENST00000495520 TP53AIP1Q9HCN2 124 aa11.34□□□□□ -0.59
LINC01558-202ENST00000495520 TMEM258P61165 79 aa11.33□□□□□ -0.6
LINC01558-202ENST00000495520 MYCBP2O75592 4640 aa11.33□□□□□ -0.6
LINC01558-202ENST00000495520 KRTAP10-8P60410 259 aa11.31□□□□□ -0.6
LINC01558-202ENST00000495520 LINC00313P59037 77 aa11.3□□□□□ -0.6
LINC01558-202ENST00000495520 TNXBP22105 4242 aa11.3□□□□□ -0.6
LINC01558-202ENST00000495520 OXTP01178 125 aa11.29□□□□□ -0.6
LINC01558-202ENST00000495520 H3BPC8 53 aa11.28□□□□□ -0.6
LINC01558-202ENST00000495520 MP68P56378 58 aa11.28□□□□□ -0.6
LINC01558-202ENST00000495520 H0Y9P7 68 aa11.26□□□□□ -0.61
LINC01558-202ENST00000495520 MT1HL1P0DM35 61 aa11.26□□□□□ -0.61
LINC01558-202ENST00000495520 KRTAP16-1A8MUX0 517 aa11.24□□□□□ -0.61
LINC01558-202ENST00000495520 TRAV22A0A0B4J277 110 aa11.24□□□□□ -0.61
LINC01558-202ENST00000495520 Q8N9P0 234 aaPredicted RBP11.23□□□□□ -0.61
LINC01558-202ENST00000495520 NDUFS5O43920 106 aa11.21□□□□□ -0.61
LINC01558-202ENST00000495520 LINC00208Q96KT6 92 aa11.2□□□□□ -0.62
LINC01558-202ENST00000495520 KRTAP13-3Q3SY46 172 aa11.17□□□□□ -0.62
LINC01558-202ENST00000495520 FAM236DA0A1B0GTK5 79 aa11.17□□□□□ -0.62
LINC01558-202ENST00000495520 FAM236CP0DP71 79 aa11.17□□□□□ -0.62
LINC01558-202ENST00000495520 C1orf64Q8NEQ6 169 aa11.16□□□□□ -0.62
LINC01558-202ENST00000495520 J3QL48 77 aa11.15□□□□□ -0.62
LINC01558-202ENST00000495520 Q5W150 140 aa11.13□□□□□ -0.63
LINC01558-202ENST00000495520 ATP5EP56381 51 aaPredicted RBP11.12□□□□□ -0.63
LINC01558-202ENST00000495520 PCLOQ9Y6V0 5065 aa11.12□□□□□ -0.63
LINC01558-202ENST00000495520 RPS28P62857 69 aaKnown RBP11.1□□□□□ -0.63
LINC01558-202ENST00000495520 RETNLBQ9BQ08 111 aa11.06□□□□□ -0.64
LINC01558-202ENST00000495520 DMBT1Q9UGM3 2413 aaPredicted RBP11.05□□□□□ -0.64
LINC01558-202ENST00000495520 LOC101927531A0A1B0GV80 90 aa11.02□□□□□ -0.64
LINC01558-202ENST00000495520 SPANXA2-OT1Q8N9U9 137 aa11.01□□□□□ -0.65
LINC01558-202ENST00000495520 SERP1Q9Y6X1 66 aa10.99□□□□□ -0.65
LINC01558-202ENST00000495520 CYP4F30PQ9H0H9 118 aa10.98□□□□□ -0.65
LINC01558-202ENST00000495520 FP248Q71RG6 208 aaPredicted RBP10.97□□□□□ -0.65
LINC01558-202ENST00000495520 C20orf166-AS1Q96NR2 134 aa10.97□□□□□ -0.65
LINC01558-202ENST00000495520 A8MUU9 505 aa10.96□□□□□ -0.65
LINC01558-202ENST00000495520 C9orf92A6NGG3 77 aa10.94□□□□□ -0.66
LINC01558-202ENST00000495520 IGLV7-46A0A075B6I9 117 aa10.92□□□□□ -0.66
LINC01558-202ENST00000495520 IGKV2-30P06310 120 aa10.92□□□□□ -0.66
LINC01558-202ENST00000495520 PCOTHQ58A44 107 aa10.92□□□□□ -0.66
LINC01558-202ENST00000495520 PRR4Q16378 134 aa10.88□□□□□ -0.67
LINC01558-202ENST00000495520 Q75L30 129 aa10.83□□□□□ -0.68
LINC01558-202ENST00000495520 HRES1P13985 223 aa10.77□□□□□ -0.69
LINC01558-202ENST00000495520 IGKV2D-30A0A075B6S6 120 aa10.76□□□□□ -0.69
LINC01558-202ENST00000495520 HERC1Q15751 4861 aa10.75□□□□□ -0.69
LINC01558-202ENST00000495520 SMIM26A0A096LP01 95 aa10.73□□□□□ -0.69
LINC01558-202ENST00000495520 C7orf65Q6ZTY9 151 aa10.73□□□□□ -0.69
LINC01558-202ENST00000495520 XP32Q5T750 250 aa10.69□□□□□ -0.7
LINC01558-202ENST00000495520 RPL37P61927 97 aaKnown RBP10.68□□□□□ -0.7
LINC01558-202ENST00000495520 TPRXLQ17RH7 258 aa10.66□□□□□ -0.7
LINC01558-202ENST00000495520 DMAC1Q96GE9 116 aa10.66□□□□□ -0.7
LINC01558-202ENST00000495520 COA5Q86WW8 74 aa10.65□□□□□ -0.7
LINC01558-202ENST00000495520 ATP11AUNQ6ZP68 121 aa10.6□□□□□ -0.71
LINC01558-202ENST00000495520 LPAP08519 4548 aa10.6□□□□□ -0.71
LINC01558-202ENST00000495520 ACYP2P14621 99 aa10.6□□□□□ -0.71
LINC01558-202ENST00000495520 SPINK7P58062 85 aa10.6□□□□□ -0.71
LINC01558-202ENST00000495520 HMCN2Q8NDA2 5059 aa10.58□□□□□ -0.72
LINC01558-202ENST00000495520 Q1T7F1 81 aa10.5□□□□□ -0.73
LINC01558-202ENST00000495520 A8MUN3 132 aa10.49□□□□□ -0.73
LINC01558-202ENST00000495520 C4orf26Q17RF5 130 aa10.48□□□□□ -0.73
LINC01558-202ENST00000495520 LRP2P98164 4655 aa10.47□□□□□ -0.73
LINC01558-202ENST00000495520 MPLKIPQ8TAP9 179 aa10.46□□□□□ -0.74
LINC01558-202ENST00000495520 KRTAP3-1Q9BYR8 98 aa10.43□□□□□ -0.74
LINC01558-202ENST00000495520 V9GYY9 64 aa10.41□□□□□ -0.74
LINC01558-202ENST00000495520 COX6B2Q6YFQ2 88 aa10.38□□□□□ -0.75
LINC01558-202ENST00000495520 CHKB-CPT1BH3BT56 60 aa10.37□□□□□ -0.75
LINC01558-202ENST00000495520 LINC01558Q9Y6Z2 57 aa10.33□□□□□ -0.76
LINC01558-202ENST00000495520 SEC61BP60468 96 aaKnown RBP10.32□□□□□ -0.76
LINC01558-202ENST00000495520 PRO0628Q9UI54 55 aa10.32□□□□□ -0.76
LINC01558-202ENST00000495520 PSPHP1O15172 72 aa10.23□□□□□ -0.77
LINC01558-202ENST00000495520 MUC17Q685J3 4493 aa10.22□□□□□ -0.77
LINC01558-202ENST00000495520 Q5VV11 94 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms