RNA–Protein interactions for RNA: ENST00000495423.1

SIMC1-208, Transcript of SUMO interacting motifs containing 1, humanhuman

TSL 2

Gene SIMC1, Length 913 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-208ENST00000495423 MTURNQ8N3F0 131 aa12.43□□□□□ -0.42
SIMC1-208ENST00000495423 F8W1H4 67 aa12.42□□□□□ -0.42
SIMC1-208ENST00000495423 C14orf132Q9NPU4 83 aa12.42□□□□□ -0.42
SIMC1-208ENST00000495423 FLGP20930 4061 aaPredicted RBP12.41□□□□□ -0.42
SIMC1-208ENST00000495423 SMCPP49901 116 aaPredicted RBP12.41□□□□□ -0.42
SIMC1-208ENST00000495423 VPS25Q9BRG1 176 aa12.39□□□□□ -0.43
SIMC1-208ENST00000495423 M0R2T5 61 aa12.38□□□□□ -0.43
SIMC1-208ENST00000495423 Q96NJ1 140 aa12.34□□□□□ -0.43
SIMC1-208ENST00000495423 LINC00472Q9H8W2 130 aa12.32□□□□□ -0.44
SIMC1-208ENST00000495423 COX6B2Q6YFQ2 88 aa12.29□□□□□ -0.44
SIMC1-208ENST00000495423 J3KT08 172 aa12.27□□□□□ -0.45
SIMC1-208ENST00000495423 RPL37P61927 97 aaKnown RBP12.26□□□□□ -0.45
SIMC1-208ENST00000495423 IGKV4-1P06312 121 aa12.23□□□□□ -0.45
SIMC1-208ENST00000495423 KRTAP9-7A8MTY7 169 aa12.22□□□□□ -0.45
SIMC1-208ENST00000495423 SIGMAR1Q99720 223 aa12.21□□□□□ -0.45
SIMC1-208ENST00000495423 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.2□□□□□ -0.46
SIMC1-208ENST00000495423 ETDBQ3ZM63 59 aa12.2□□□□□ -0.46
SIMC1-208ENST00000495423 NREPQ16612 68 aa12.19□□□□□ -0.46
SIMC1-208ENST00000495423 A0A1B0GV90 55 aa12.18□□□□□ -0.46
SIMC1-208ENST00000495423 NDUFB1O75438 58 aa12.12□□□□□ -0.47
SIMC1-208ENST00000495423 DEFB116Q30KQ4 102 aa12.11□□□□□ -0.47
SIMC1-208ENST00000495423 C8orf87E5RJ46 101 aa12.1□□□□□ -0.47
SIMC1-208ENST00000495423 A0A1B0GVX0 72 aa12.09□□□□□ -0.47
SIMC1-208ENST00000495423 A8MWP4 228 aa12.08□□□□□ -0.48
SIMC1-208ENST00000495423 LINC00313P59037 77 aa12.08□□□□□ -0.48
SIMC1-208ENST00000495423 Q6ZVQ6 151 aa12.06□□□□□ -0.48
SIMC1-208ENST00000495423 UBL5Q9BZL1 73 aa12.06□□□□□ -0.48
SIMC1-208ENST00000495423 Q75L30 129 aa12.05□□□□□ -0.48
SIMC1-208ENST00000495423 IGHV6-1A0A0B4J1U7 121 aa12.03□□□□□ -0.48
SIMC1-208ENST00000495423 ACYP1P07311 99 aa12.03□□□□□ -0.48
SIMC1-208ENST00000495423 LINC00846Q9NV44 126 aa12.03□□□□□ -0.48
SIMC1-208ENST00000495423 SSPOA2VEC9 5147 aa12.03□□□□□ -0.48
SIMC1-208ENST00000495423 C20orf166-AS1Q96NR2 134 aa12.02□□□□□ -0.49
SIMC1-208ENST00000495423 FAM240AA0A1B0GVK7 77 aa12.01□□□□□ -0.49
SIMC1-208ENST00000495423 BPY2O14599 106 aa12.01□□□□□ -0.49
SIMC1-208ENST00000495423 DSCR10P59022 87 aa12□□□□□ -0.49
SIMC1-208ENST00000495423 PRR15Q8IV56 129 aa12□□□□□ -0.49
SIMC1-208ENST00000495423 A8MUU9 505 aa11.99□□□□□ -0.49
SIMC1-208ENST00000495423 IGKV3D-7A0A0C4DH55 119 aa11.98□□□□□ -0.49
SIMC1-208ENST00000495423 USH2AO75445 5202 aa11.97□□□□□ -0.49
SIMC1-208ENST00000495423 KRTAP16-1A8MUX0 517 aa11.96□□□□□ -0.49
SIMC1-208ENST00000495423 KRTAP9-8Q9BYQ0 159 aa11.95□□□□□ -0.5
SIMC1-208ENST00000495423 NOTCH2NLQ7Z3S9 236 aa11.94□□□□□ -0.5
SIMC1-208ENST00000495423 C8orf17Q9NRJ1 99 aa11.92□□□□□ -0.5
SIMC1-208ENST00000495423 ATP11AUNQ6ZP68 121 aa11.91□□□□□ -0.5
SIMC1-208ENST00000495423 K7EQZ3 153 aa11.88□□□□□ -0.51
SIMC1-208ENST00000495423 CXCL6P80162 114 aa11.88□□□□□ -0.51
SIMC1-208ENST00000495423 J3QR89 54 aa11.85□□□□□ -0.51
SIMC1-208ENST00000495423 Q8N9P0 234 aaPredicted RBP11.84□□□□□ -0.51
SIMC1-208ENST00000495423 MMP24-AS1A0A0U1RRL7 71 aa11.83□□□□□ -0.52
SIMC1-208ENST00000495423 TMEM254Q8TBM7 123 aa11.83□□□□□ -0.52
SIMC1-208ENST00000495423 FCGBPQ9Y6R7 5405 aaPredicted RBP11.82□□□□□ -0.52
SIMC1-208ENST00000495423 ATP5EP2Q5VTU8 51 aa11.81□□□□□ -0.52
SIMC1-208ENST00000495423 hDV103S1A0JD37 113 aa11.79□□□□□ -0.52
SIMC1-208ENST00000495423 MRPL34Q9BQ48 92 aaKnown RBP11.78□□□□□ -0.52
SIMC1-208ENST00000495423 Q8N9L7 120 aa11.75□□□□□ -0.53
SIMC1-208ENST00000495423 LINC00643Q86TS7 51 aa11.73□□□□□ -0.53
SIMC1-208ENST00000495423 KRTAP19-1Q8IUB9 90 aa11.72□□□□□ -0.53
SIMC1-208ENST00000495423 MT2AP02795 61 aa11.71□□□□□ -0.53
SIMC1-208ENST00000495423 CASC2Q6XLA1 102 aa11.71□□□□□ -0.53
SIMC1-208ENST00000495423 HCG22E2RYF7 251 aa11.69□□□□□ -0.54
SIMC1-208ENST00000495423 ZCCHC13Q8WW36 166 aaKnown RBP11.69□□□□□ -0.54
SIMC1-208ENST00000495423 LCE2BO14633 110 aa11.67□□□□□ -0.54
SIMC1-208ENST00000495423 WFDC13Q8IUB5 93 aa11.64□□□□□ -0.55
SIMC1-208ENST00000495423 K7ERU9 68 aa11.62□□□□□ -0.55
SIMC1-208ENST00000495423 MT1FP04733 61 aa11.61□□□□□ -0.55
SIMC1-208ENST00000495423 KRTAP9-3Q9BYQ3 159 aa11.6□□□□□ -0.55
SIMC1-208ENST00000495423 NDUFS5O43920 106 aa11.59□□□□□ -0.55
SIMC1-208ENST00000495423 MACF1Q9UPN3 7388 aaKnown RBP11.58□□□□□ -0.56
SIMC1-208ENST00000495423 TP53AIP1Q9HCN2 124 aa11.54□□□□□ -0.56
SIMC1-208ENST00000495423 HIST1H4AP62805 103 aaKnown RBP11.52□□□□□ -0.57
SIMC1-208ENST00000495423 SYNE2Q8WXH0 6885 aaKnown RBP11.51□□□□□ -0.57
SIMC1-208ENST00000495423 KRTAP10-10P60014 251 aa11.5□□□□□ -0.57
SIMC1-208ENST00000495423 FAM236DA0A1B0GTK5 79 aa11.48□□□□□ -0.57
SIMC1-208ENST00000495423 FAM236CP0DP71 79 aa11.48□□□□□ -0.57
SIMC1-208ENST00000495423 SPINK7P58062 85 aa11.46□□□□□ -0.57
SIMC1-208ENST00000495423 MPLKIPQ8TAP9 179 aa11.45□□□□□ -0.58
SIMC1-208ENST00000495423 Q5W150 140 aa11.42□□□□□ -0.58
SIMC1-208ENST00000495423 IMUPQ9GZP8 106 aa11.41□□□□□ -0.58
SIMC1-208ENST00000495423 HRES1P13985 223 aa11.4□□□□□ -0.58
SIMC1-208ENST00000495423 RBM12B-AS1Q9P1G2 102 aa11.4□□□□□ -0.58
SIMC1-208ENST00000495423 KRTAP19-6Q3LI70 58 aa11.38□□□□□ -0.59
SIMC1-208ENST00000495423 A0A087WVE0 104 aa11.36□□□□□ -0.59
SIMC1-208ENST00000495423 C7orf65Q6ZTY9 151 aa11.36□□□□□ -0.59
SIMC1-208ENST00000495423 UQCRQO14949 82 aa11.31□□□□□ -0.6
SIMC1-208ENST00000495423 IGKV2D-30A0A075B6S6 120 aa11.28□□□□□ -0.6
SIMC1-208ENST00000495423 IGKV2-30P06310 120 aa11.28□□□□□ -0.6
SIMC1-208ENST00000495423 TRAV22A0A0B4J277 110 aa11.27□□□□□ -0.61
SIMC1-208ENST00000495423 ATOX1O00244 68 aa11.24□□□□□ -0.61
SIMC1-208ENST00000495423 MT-ATP8P03928 68 aa11.24□□□□□ -0.61
SIMC1-208ENST00000495423 KRTAP6-3Q3LI67 103 aa11.21□□□□□ -0.61
SIMC1-208ENST00000495423 OCR1Q9BZK8 76 aa11.21□□□□□ -0.61
SIMC1-208ENST00000495423 LOC101927531A0A1B0GV80 90 aa11.19□□□□□ -0.62
SIMC1-208ENST00000495423 SCGB1A1P11684 91 aa11.17□□□□□ -0.62
SIMC1-208ENST00000495423 H0Y9P7 68 aa11.13□□□□□ -0.63
SIMC1-208ENST00000495423 C5orf47Q569G3 176 aa11.13□□□□□ -0.63
SIMC1-208ENST00000495423 CYP4F30PQ9H0H9 118 aa11.13□□□□□ -0.63
SIMC1-208ENST00000495423 SMIM20Q8N5G0 67 aa11.11□□□□□ -0.63
SIMC1-208ENST00000495423 MP68P56378 58 aa11.1□□□□□ -0.63
SIMC1-208ENST00000495423 H3BPC8 53 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms