RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 LINC00643Q86TS7 51 aa9.38□□□□□ -0.91
SNX17-209ENST00000494893 C9orf92A6NGG3 77 aa9.36□□□□□ -0.91
SNX17-209ENST00000494893 BPY2O14599 106 aa9.35□□□□□ -0.91
SNX17-209ENST00000494893 DEFB116Q30KQ4 102 aa9.35□□□□□ -0.91
SNX17-209ENST00000494893 J3KT08 172 aa9.34□□□□□ -0.91
SNX17-209ENST00000494893 SIGMAR1Q99720 223 aa9.34□□□□□ -0.91
SNX17-209ENST00000494893 IGKV4-1P06312 121 aa9.33□□□□□ -0.92
SNX17-209ENST00000494893 CXCL6P80162 114 aa9.32□□□□□ -0.92
SNX17-209ENST00000494893 ATP5EP2Q5VTU8 51 aa9.32□□□□□ -0.92
SNX17-209ENST00000494893 KRTAP4-1Q9BYQ7 146 aa9.32□□□□□ -0.92
SNX17-209ENST00000494893 IGKV3D-7A0A0C4DH55 119 aa9.3□□□□□ -0.92
SNX17-209ENST00000494893 DSCR10P59022 87 aa9.3□□□□□ -0.92
SNX17-209ENST00000494893 A8MWP4 228 aa9.27□□□□□ -0.93
SNX17-209ENST00000494893 SEC61BP60468 96 aaKnown RBP9.27□□□□□ -0.93
SNX17-209ENST00000494893 FAT4Q6V0I7 4981 aa9.25□□□□□ -0.93
SNX17-209ENST00000494893 NDUFB1O75438 58 aa9.24□□□□□ -0.93
SNX17-209ENST00000494893 MT-ATP8P03928 68 aa9.24□□□□□ -0.93
SNX17-209ENST00000494893 K7EQZ3 153 aa9.23□□□□□ -0.93
SNX17-209ENST00000494893 Q8N9L7 120 aa9.23□□□□□ -0.93
SNX17-209ENST00000494893 PRR15Q8IV56 129 aa9.22□□□□□ -0.93
SNX17-209ENST00000494893 A0A1B0GVX0 72 aa9.21□□□□□ -0.94
SNX17-209ENST00000494893 PCOTHQ58A44 107 aa9.2□□□□□ -0.94
SNX17-209ENST00000494893 IGHV6-1A0A0B4J1U7 121 aa9.18□□□□□ -0.94
SNX17-209ENST00000494893 RPL37P61927 97 aaKnown RBP9.18□□□□□ -0.94
SNX17-209ENST00000494893 HIST1H4AP62805 103 aaKnown RBP9.18□□□□□ -0.94
SNX17-209ENST00000494893 IMUPQ9GZP8 106 aa9.18□□□□□ -0.94
SNX17-209ENST00000494893 A0A0U1RQV1 116 aa9.14□□□□□ -0.95
SNX17-209ENST00000494893 C8orf87E5RJ46 101 aa9.14□□□□□ -0.95
SNX17-209ENST00000494893 C8orf17Q9NRJ1 99 aa9.14□□□□□ -0.95
SNX17-209ENST00000494893 LINC00313P59037 77 aa9.13□□□□□ -0.95
SNX17-209ENST00000494893 NOTCH2NLQ7Z3S9 236 aa9.13□□□□□ -0.95
SNX17-209ENST00000494893 LCE2AQ5TA79 106 aaPredicted RBP9.12□□□□□ -0.95
SNX17-209ENST00000494893 A0A087WVE0 104 aa9.11□□□□□ -0.95
SNX17-209ENST00000494893 MMP24-AS1A0A0U1RRL7 71 aa9.11□□□□□ -0.95
SNX17-209ENST00000494893 HCG22E2RYF7 251 aa9.1□□□□□ -0.95
SNX17-209ENST00000494893 Q75L30 129 aa9.07□□□□□ -0.96
SNX17-209ENST00000494893 WFDC13Q8IUB5 93 aa9.07□□□□□ -0.96
SNX17-209ENST00000494893 hDV103S1A0JD37 113 aa9.06□□□□□ -0.96
SNX17-209ENST00000494893 KRTAP19-2Q3LHN2 52 aa9.06□□□□□ -0.96
SNX17-209ENST00000494893 CASC2Q6XLA1 102 aa9.06□□□□□ -0.96
SNX17-209ENST00000494893 TMEM254Q8TBM7 123 aa9.05□□□□□ -0.96
SNX17-209ENST00000494893 KRTAP16-1A8MUX0 517 aa9.04□□□□□ -0.96
SNX17-209ENST00000494893 C20orf166-AS1Q96NR2 134 aa9.04□□□□□ -0.96
SNX17-209ENST00000494893 A8MUU9 505 aa9.03□□□□□ -0.96
SNX17-209ENST00000494893 LCE2CQ5TA81 110 aa9.03□□□□□ -0.96
SNX17-209ENST00000494893 MRPL34Q9BQ48 92 aaKnown RBP9.02□□□□□ -0.97
SNX17-209ENST00000494893 FAM236AA0A1B0GUQ0 79 aa8.99□□□□□ -0.97
SNX17-209ENST00000494893 FAM236BA0A1B0GV22 79 aa8.99□□□□□ -0.97
SNX17-209ENST00000494893 Q8N9P0 234 aaPredicted RBP8.97□□□□□ -0.97
SNX17-209ENST00000494893 ATP11AUNQ6ZP68 121 aa8.96□□□□□ -0.98
SNX17-209ENST00000494893 SCGB1A1P11684 91 aa8.94□□□□□ -0.98
SNX17-209ENST00000494893 NDUFS5O43920 106 aa8.91□□□□□ -0.98
SNX17-209ENST00000494893 ATOX1O00244 68 aa8.89□□□□□ -0.99
SNX17-209ENST00000494893 TP53AIP1Q9HCN2 124 aa8.89□□□□□ -0.99
SNX17-209ENST00000494893 OCR1Q9BZK8 76 aa8.88□□□□□ -0.99
SNX17-209ENST00000494893 MT1HP80294 61 aa8.86□□□□□ -0.99
SNX17-209ENST00000494893 SMIM20Q8N5G0 67 aa8.86□□□□□ -0.99
SNX17-209ENST00000494893 UQCRQO14949 82 aa8.84□□□□□ -0.99
SNX17-209ENST00000494893 TRAV7A0A075B6U4 112 aa8.82□□□□□ -1
SNX17-209ENST00000494893 ZCCHC13Q8WW36 166 aaKnown RBP8.81□□□□□ -1
SNX17-209ENST00000494893 Q5W150 140 aa8.8□□□□□ -1
SNX17-209ENST00000494893 FLGP20930 4061 aaPredicted RBP8.8□□□□□ -1
SNX17-209ENST00000494893 SERP2Q8N6R1 65 aa8.78□□□□□ -1
SNX17-209ENST00000494893 C5orf47Q569G3 176 aa8.76□□□□□ -1.01
SNX17-209ENST00000494893 TRAV22A0A0B4J277 110 aa8.75□□□□□ -1.01
SNX17-209ENST00000494893 COX6B2Q6YFQ2 88 aa8.75□□□□□ -1.01
SNX17-209ENST00000494893 ANAPC13Q9BS18 74 aa8.74□□□□□ -1.01
SNX17-209ENST00000494893 H0Y9P7 68 aa8.73□□□□□ -1.01
SNX17-209ENST00000494893 HRES1P13985 223 aa8.71□□□□□ -1.02
SNX17-209ENST00000494893 MP68P56378 58 aa8.71□□□□□ -1.02
SNX17-209ENST00000494893 COX7CP15954 63 aa8.7□□□□□ -1.02
SNX17-209ENST00000494893 MPLKIPQ8TAP9 179 aa8.69□□□□□ -1.02
SNX17-209ENST00000494893 H3BPC8 53 aa8.67□□□□□ -1.02
SNX17-209ENST00000494893 KRTAP9-2Q9BYQ4 174 aa8.66□□□□□ -1.02
SNX17-209ENST00000494893 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
SNX17-209ENST00000494893 KRTAP10-6P60371 365 aaPredicted RBP8.65□□□□□ -1.02
SNX17-209ENST00000494893 LINC00208Q96KT6 92 aa8.65□□□□□ -1.02
SNX17-209ENST00000494893 LOC101927531A0A1B0GV80 90 aa8.64□□□□□ -1.03
SNX17-209ENST00000494893 IGKV2-30P06310 120 aa8.64□□□□□ -1.03
SNX17-209ENST00000494893 C1orf64Q8NEQ6 169 aa8.64□□□□□ -1.03
SNX17-209ENST00000494893 IGKV2D-30A0A075B6S6 120 aa8.61□□□□□ -1.03
SNX17-209ENST00000494893 SPINK7P58062 85 aa8.61□□□□□ -1.03
SNX17-209ENST00000494893 C20orf197Q8N268 126 aa8.61□□□□□ -1.03
SNX17-209ENST00000494893 M0R2T5 61 aa8.6□□□□□ -1.03
SNX17-209ENST00000494893 C7orf65Q6ZTY9 151 aa8.6□□□□□ -1.03
SNX17-209ENST00000494893 CYP4F30PQ9H0H9 118 aa8.6□□□□□ -1.03
SNX17-209ENST00000494893 SNURFQ9Y675 71 aa8.57□□□□□ -1.04
SNX17-209ENST00000494893 KLKP1Q107X0 134 aa8.56□□□□□ -1.04
SNX17-209ENST00000494893 CCDC179H3BU77 68 aa8.55□□□□□ -1.04
SNX17-209ENST00000494893 KRTAP9-6A0A140TA67 174 aa8.54□□□□□ -1.04
SNX17-209ENST00000494893 RBM12B-AS1Q9P1G2 102 aa8.54□□□□□ -1.04
SNX17-209ENST00000494893 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
SNX17-209ENST00000494893 FAM236DA0A1B0GTK5 79 aa8.52□□□□□ -1.05
SNX17-209ENST00000494893 FAM236CP0DP71 79 aa8.52□□□□□ -1.05
SNX17-209ENST00000494893 PCP4P48539 62 aa8.51□□□□□ -1.05
SNX17-209ENST00000494893 CYSTM1Q9H1C7 97 aa8.46□□□□□ -1.06
SNX17-209ENST00000494893 NDUFC1O43677 76 aa8.45□□□□□ -1.06
SNX17-209ENST00000494893 KRTAP9-8Q9BYQ0 159 aa8.44□□□□□ -1.06
SNX17-209ENST00000494893 H7BZZ5 65 aa8.41□□□□□ -1.06
SNX17-209ENST00000494893 C4orf26Q17RF5 130 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms