RNA–Protein interactions for RNA: ENST00000494877.5

GABBR1-220, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-220ENST00000494877 CASC2Q6XLA1 102 aa10.23□□□□□ -0.77
GABBR1-220ENST00000494877 LRP1BQ9NZR2 4599 aa10.2□□□□□ -0.78
GABBR1-220ENST00000494877 C1orf64Q8NEQ6 169 aa10.19□□□□□ -0.78
GABBR1-220ENST00000494877 PSPHP1O15172 72 aa10.18□□□□□ -0.78
GABBR1-220ENST00000494877 MMP24-AS1A0A0U1RRL7 71 aa10.17□□□□□ -0.78
GABBR1-220ENST00000494877 C8orf87E5RJ46 101 aa10.16□□□□□ -0.78
GABBR1-220ENST00000494877 TRAV22A0A0B4J277 110 aa10.16□□□□□ -0.78
GABBR1-220ENST00000494877 SSBP3-AS1Q7Z2R9 100 aa10.16□□□□□ -0.78
GABBR1-220ENST00000494877 ZCCHC13Q8WW36 166 aaKnown RBP10.15□□□□□ -0.78
GABBR1-220ENST00000494877 VPS13BQ7Z7G8 4022 aa10.13□□□□□ -0.79
GABBR1-220ENST00000494877 MP68P56378 58 aa10.12□□□□□ -0.79
GABBR1-220ENST00000494877 CDK2AP2O75956 126 aa10.11□□□□□ -0.79
GABBR1-220ENST00000494877 A0A1B0GVX0 72 aa10.1□□□□□ -0.79
GABBR1-220ENST00000494877 ASB16-AS1Q495Z4 193 aa10.1□□□□□ -0.79
GABBR1-220ENST00000494877 C8orf17Q9NRJ1 99 aa10.09□□□□□ -0.79
GABBR1-220ENST00000494877 PKHD1P08F94 4074 aa10.08□□□□□ -0.8
GABBR1-220ENST00000494877 IGHV6-1A0A0B4J1U7 121 aa10.08□□□□□ -0.8
GABBR1-220ENST00000494877 ATP11AUNQ6ZP68 121 aa10.08□□□□□ -0.8
GABBR1-220ENST00000494877 CYP4F30PQ9H0H9 118 aa10.08□□□□□ -0.8
GABBR1-220ENST00000494877 A0A087X002 238 aa10.07□□□□□ -0.8
GABBR1-220ENST00000494877 A8MUN3 132 aa10.06□□□□□ -0.8
GABBR1-220ENST00000494877 H0Y9P7 68 aa10.06□□□□□ -0.8
GABBR1-220ENST00000494877 H3BPC8 53 aa10.06□□□□□ -0.8
GABBR1-220ENST00000494877 LCA10Q71F78 164 aa10.05□□□□□ -0.8
GABBR1-220ENST00000494877 KRTAP13-2Q52LG2 175 aa10.04□□□□□ -0.8
GABBR1-220ENST00000494877 LINC00208Q96KT6 92 aa10.04□□□□□ -0.8
GABBR1-220ENST00000494877 KMT2CQ8NEZ4 4911 aaKnown RBP10.04□□□□□ -0.8
GABBR1-220ENST00000494877 TP53AIP1Q9HCN2 124 aa10.02□□□□□ -0.8
GABBR1-220ENST00000494877 RYR2Q92736 4967 aa10.02□□□□□ -0.81
GABBR1-220ENST00000494877 SPINK6Q6UWN8 80 aa10.02□□□□□ -0.81
GABBR1-220ENST00000494877 C7orf65Q6ZTY9 151 aa10.02□□□□□ -0.81
GABBR1-220ENST00000494877 KRTAP1-4P0C5Y4 121 aa10.01□□□□□ -0.81
GABBR1-220ENST00000494877 Q5VV11 94 aa10.01□□□□□ -0.81
GABBR1-220ENST00000494877 PRR26Q8N8Z3 221 aa10□□□□□ -0.81
GABBR1-220ENST00000494877 A6NN06 94 aa9.99□□□□□ -0.81
GABBR1-220ENST00000494877 MRPL34Q9BQ48 92 aaKnown RBP9.99□□□□□ -0.81
GABBR1-220ENST00000494877 A0A1B0GVY2 172 aa9.98□□□□□ -0.81
GABBR1-220ENST00000494877 A8MU10 97 aa9.98□□□□□ -0.81
GABBR1-220ENST00000494877 NOTCH2NLQ7Z3S9 236 aa9.98□□□□□ -0.81
GABBR1-220ENST00000494877 PRR4Q16378 134 aa9.97□□□□□ -0.81
GABBR1-220ENST00000494877 CHKB-CPT1BH3BT56 60 aa9.96□□□□□ -0.82
GABBR1-220ENST00000494877 DYNC1H1Q14204 4646 aaKnown RBP9.95□□□□□ -0.82
GABBR1-220ENST00000494877 LIMD2Q9BT23 127 aa9.94□□□□□ -0.82
GABBR1-220ENST00000494877 PLA2G1BP04054 148 aaKnown RBP9.94□□□□□ -0.82
GABBR1-220ENST00000494877 SPTSSBQ8NFR3 76 aa9.93□□□□□ -0.82
GABBR1-220ENST00000494877 SPANXA2-OT1Q8N9U9 137 aa9.89□□□□□ -0.83
GABBR1-220ENST00000494877 Q8N9P0 234 aaPredicted RBP9.88□□□□□ -0.83
GABBR1-220ENST00000494877 TYMSOSQ8TAI1 123 aa9.88□□□□□ -0.83
GABBR1-220ENST00000494877 PRR15LQ9BU68 103 aa9.87□□□□□ -0.83
GABBR1-220ENST00000494877 LINC00313P59037 77 aa9.84□□□□□ -0.83
GABBR1-220ENST00000494877 APOBP04114 4563 aaKnown RBP9.84□□□□□ -0.83
GABBR1-220ENST00000494877 SMR3BP02814 79 aaPredicted RBP9.83□□□□□ -0.84
GABBR1-220ENST00000494877 SPINK1P00995 79 aa9.82□□□□□ -0.84
GABBR1-220ENST00000494877 Q75L30 129 aa9.82□□□□□ -0.84
GABBR1-220ENST00000494877 A6NED7 52 aa9.81□□□□□ -0.84
GABBR1-220ENST00000494877 RYR3Q15413 4870 aa9.8□□□□□ -0.84
GABBR1-220ENST00000494877 CDC42SE1Q9NRR8 79 aa9.8□□□□□ -0.84
GABBR1-220ENST00000494877 FAT1Q14517 4588 aa9.78□□□□□ -0.84
GABBR1-220ENST00000494877 IGLV7-46A0A075B6I9 117 aa9.78□□□□□ -0.84
GABBR1-220ENST00000494877 PCOTHQ58A44 107 aa9.78□□□□□ -0.84
GABBR1-220ENST00000494877 Q5W150 140 aa9.78□□□□□ -0.84
GABBR1-220ENST00000494877 LOC101927531A0A1B0GV80 90 aa9.77□□□□□ -0.85
GABBR1-220ENST00000494877 KRTAP13-3Q3SY46 172 aa9.77□□□□□ -0.85
GABBR1-220ENST00000494877 LINC01554Q52M75 96 aa9.76□□□□□ -0.85
GABBR1-220ENST00000494877 LINC00304Q8N9R0 145 aa9.75□□□□□ -0.85
GABBR1-220ENST00000494877 KRTAP10-4P60372 401 aaPredicted RBP9.74□□□□□ -0.85
GABBR1-220ENST00000494877 RPS29P62273 56 aaKnown RBP9.74□□□□□ -0.85
GABBR1-220ENST00000494877 SPAG11AQ6PDA7 123 aa9.74□□□□□ -0.85
GABBR1-220ENST00000494877 KRTAP16-1A8MUX0 517 aa9.72□□□□□ -0.85
GABBR1-220ENST00000494877 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
GABBR1-220ENST00000494877 PKHD1L1Q86WI1 4243 aa9.68□□□□□ -0.86
GABBR1-220ENST00000494877 COA5Q86WW8 74 aa9.66□□□□□ -0.86
GABBR1-220ENST00000494877 RETNLBQ9BQ08 111 aa9.6□□□□□ -0.87
GABBR1-220ENST00000494877 LINC01558Q9Y6Z2 57 aa9.6□□□□□ -0.87
GABBR1-220ENST00000494877 IGKV2-30P06310 120 aa9.57□□□□□ -0.88
GABBR1-220ENST00000494877 HRES1P13985 223 aa9.53□□□□□ -0.88
GABBR1-220ENST00000494877 Q5VSD8 79 aa9.51□□□□□ -0.89
GABBR1-220ENST00000494877 HSPG2P98160 4391 aa9.51□□□□□ -0.89
GABBR1-220ENST00000494877 SPINK7P58062 85 aa9.51□□□□□ -0.89
GABBR1-220ENST00000494877 PRAC1Q96KF2 57 aa9.48□□□□□ -0.89
GABBR1-220ENST00000494877 EPPK1P58107 5090 aaKnown RBP9.47□□□□□ -0.89
GABBR1-220ENST00000494877 IGKV2D-30A0A075B6S6 120 aa9.46□□□□□ -0.89
GABBR1-220ENST00000494877 ACYP2P14621 99 aa9.46□□□□□ -0.89
GABBR1-220ENST00000494877 DMAC1Q96GE9 116 aa9.46□□□□□ -0.9
GABBR1-220ENST00000494877 RYR1P21817 5038 aa9.46□□□□□ -0.9
GABBR1-220ENST00000494877 KRTAP17-1Q9BYP8 105 aa9.44□□□□□ -0.9
GABBR1-220ENST00000494877 KIAA1109Q2LD37 5005 aa9.44□□□□□ -0.9
GABBR1-220ENST00000494877 FLG2Q5D862 2391 aaPredicted RBP9.43□□□□□ -0.9
GABBR1-220ENST00000494877 TNXBP22105 4242 aa9.43□□□□□ -0.9
GABBR1-220ENST00000494877 C9orf92A6NGG3 77 aa9.42□□□□□ -0.9
GABBR1-220ENST00000494877 C20orf166-AS1Q96NR2 134 aa9.41□□□□□ -0.9
GABBR1-220ENST00000494877 LRP1Q07954 4544 aaKnown RBP9.4□□□□□ -0.9
GABBR1-220ENST00000494877 A8MUU9 505 aa9.39□□□□□ -0.91
GABBR1-220ENST00000494877 KRTAP10-8P60410 259 aa9.38□□□□□ -0.91
GABBR1-220ENST00000494877 Q8N1X5 172 aa9.38□□□□□ -0.91
GABBR1-220ENST00000494877 FAT3Q8TDW7 4589 aa9.34□□□□□ -0.91
GABBR1-220ENST00000494877 ADM2Q7Z4H4 148 aa9.31□□□□□ -0.92
GABBR1-220ENST00000494877 DMBT1Q9UGM3 2413 aaPredicted RBP9.25□□□□□ -0.93
GABBR1-220ENST00000494877 A0A0A0MQY5 61 aa9.22□□□□□ -0.93
GABBR1-220ENST00000494877 KRTAP4-5Q9BYR2 181 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms