RNA–Protein interactions for RNA: ENST00000494829.1

RUNX1-217, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 3,622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-217ENST00000494829 KRTAP17-1Q9BYP8 105 aa3.34□□□□□ -1.87
RUNX1-217ENST00000494829 A8MWP4 228 aa3.34□□□□□ -1.88
RUNX1-217ENST00000494829 A0A1B0GVY2 172 aa3.33□□□□□ -1.88
RUNX1-217ENST00000494829 ZCCHC13Q8WW36 166 aaKnown RBP3.33□□□□□ -1.88
RUNX1-217ENST00000494829 SMR3BP02814 79 aaPredicted RBP3.33□□□□□ -1.88
RUNX1-217ENST00000494829 TMEM258P61165 79 aa3.33□□□□□ -1.88
RUNX1-217ENST00000494829 MYCBP2O75592 4640 aa3.32□□□□□ -1.88
RUNX1-217ENST00000494829 ASB16-AS1Q495Z4 193 aa3.32□□□□□ -1.88
RUNX1-217ENST00000494829 KRTAP10-4P60372 401 aaPredicted RBP3.32□□□□□ -1.88
RUNX1-217ENST00000494829 FAM229BQ4G0N7 80 aa3.32□□□□□ -1.88
RUNX1-217ENST00000494829 KIAA1109Q2LD37 5005 aa3.31□□□□□ -1.88
RUNX1-217ENST00000494829 CASC2Q6XLA1 102 aa3.31□□□□□ -1.88
RUNX1-217ENST00000494829 FAT3Q8TDW7 4589 aa3.31□□□□□ -1.88
RUNX1-217ENST00000494829 RYR1P21817 5038 aa3.31□□□□□ -1.88
RUNX1-217ENST00000494829 ZNF706Q9Y5V0 76 aaPredicted RBP3.31□□□□□ -1.88
RUNX1-217ENST00000494829 SPINK6Q6UWN8 80 aa3.3□□□□□ -1.88
RUNX1-217ENST00000494829 IGHV6-1A0A0B4J1U7 121 aa3.3□□□□□ -1.88
RUNX1-217ENST00000494829 FAM236DA0A1B0GTK5 79 aa3.3□□□□□ -1.88
RUNX1-217ENST00000494829 FAM236CP0DP71 79 aa3.3□□□□□ -1.88
RUNX1-217ENST00000494829 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
RUNX1-217ENST00000494829 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
RUNX1-217ENST00000494829 PRR4Q16378 134 aa3.29□□□□□ -1.88
RUNX1-217ENST00000494829 C8orf17Q9NRJ1 99 aa3.29□□□□□ -1.88
RUNX1-217ENST00000494829 A0A1B0GVX0 72 aa3.28□□□□□ -1.88
RUNX1-217ENST00000494829 hDV103S1A0JD37 113 aa3.28□□□□□ -1.88
RUNX1-217ENST00000494829 Q5XG85 94 aa3.28□□□□□ -1.88
RUNX1-217ENST00000494829 Q5W150 140 aa3.28□□□□□ -1.88
RUNX1-217ENST00000494829 J3KT08 172 aa3.27□□□□□ -1.89
RUNX1-217ENST00000494829 C1orf195Q5TG92 126 aa3.27□□□□□ -1.89
RUNX1-217ENST00000494829 FP248Q71RG6 208 aaPredicted RBP3.27□□□□□ -1.89
RUNX1-217ENST00000494829 PRR26Q8N8Z3 221 aa3.26□□□□□ -1.89
RUNX1-217ENST00000494829 LINC00208Q96KT6 92 aa3.26□□□□□ -1.89
RUNX1-217ENST00000494829 H0Y9P7 68 aa3.26□□□□□ -1.89
RUNX1-217ENST00000494829 RPS28P62857 69 aaKnown RBP3.26□□□□□ -1.89
RUNX1-217ENST00000494829 C4orf26Q17RF5 130 aa3.26□□□□□ -1.89
RUNX1-217ENST00000494829 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
RUNX1-217ENST00000494829 KRTAP13-3Q3SY46 172 aa3.25□□□□□ -1.89
RUNX1-217ENST00000494829 KRTAP3-1Q9BYR8 98 aa3.25□□□□□ -1.89
RUNX1-217ENST00000494829 TRAV22A0A0B4J277 110 aa3.25□□□□□ -1.89
RUNX1-217ENST00000494829 C5orf47Q569G3 176 aa3.25□□□□□ -1.89
RUNX1-217ENST00000494829 SSBP3-AS1Q7Z2R9 100 aa3.25□□□□□ -1.89
RUNX1-217ENST00000494829 LPAP08519 4548 aa3.24□□□□□ -1.89
RUNX1-217ENST00000494829 KRTAP16-1A8MUX0 517 aa3.24□□□□□ -1.89
RUNX1-217ENST00000494829 CD164Q04900 197 aa3.24□□□□□ -1.89
RUNX1-217ENST00000494829 SERP1Q9Y6X1 66 aa3.23□□□□□ -1.89
RUNX1-217ENST00000494829 NDUFC1O43677 76 aa3.23□□□□□ -1.89
RUNX1-217ENST00000494829 NDUFB1O75438 58 aa3.23□□□□□ -1.89
RUNX1-217ENST00000494829 C1orf64Q8NEQ6 169 aa3.23□□□□□ -1.89
RUNX1-217ENST00000494829 RETNLBQ9BQ08 111 aa3.23□□□□□ -1.89
RUNX1-217ENST00000494829 MRPL34Q9BQ48 92 aaKnown RBP3.23□□□□□ -1.89
RUNX1-217ENST00000494829 PCOTHQ58A44 107 aa3.22□□□□□ -1.89
RUNX1-217ENST00000494829 ABCA13Q86UQ4 5058 aa3.22□□□□□ -1.89
RUNX1-217ENST00000494829 NDUFS5O43920 106 aa3.22□□□□□ -1.89
RUNX1-217ENST00000494829 TYMSOSQ8TAI1 123 aa3.21□□□□□ -1.9
RUNX1-217ENST00000494829 LINC00336Q6ZUF6 198 aa3.21□□□□□ -1.9
RUNX1-217ENST00000494829 Q8N9P0 234 aaPredicted RBP3.2□□□□□ -1.9
RUNX1-217ENST00000494829 MP68P56378 58 aa3.19□□□□□ -1.9
RUNX1-217ENST00000494829 FLG2Q5D862 2391 aaPredicted RBP3.19□□□□□ -1.9
RUNX1-217ENST00000494829 CDK2AP2O75956 126 aa3.19□□□□□ -1.9
RUNX1-217ENST00000494829 MPLKIPQ8TAP9 179 aa3.18□□□□□ -1.9
RUNX1-217ENST00000494829 LINC00313P59037 77 aa3.18□□□□□ -1.9
RUNX1-217ENST00000494829 CYP4F30PQ9H0H9 118 aa3.18□□□□□ -1.9
RUNX1-217ENST00000494829 LINC00304Q8N9R0 145 aa3.17□□□□□ -1.9
RUNX1-217ENST00000494829 ATP5EP56381 51 aaPredicted RBP3.16□□□□□ -1.9
RUNX1-217ENST00000494829 TP53AIP1Q9HCN2 124 aa3.16□□□□□ -1.9
RUNX1-217ENST00000494829 Q8N1X5 172 aa3.16□□□□□ -1.9
RUNX1-217ENST00000494829 LRP2P98164 4655 aa3.16□□□□□ -1.9
RUNX1-217ENST00000494829 IGLV7-46A0A075B6I9 117 aa3.15□□□□□ -1.9
RUNX1-217ENST00000494829 SPINK1P00995 79 aa3.15□□□□□ -1.9
RUNX1-217ENST00000494829 SMIM26A0A096LP01 95 aa3.15□□□□□ -1.91
RUNX1-217ENST00000494829 C9orf92A6NGG3 77 aa3.15□□□□□ -1.91
RUNX1-217ENST00000494829 H3BPC8 53 aa3.15□□□□□ -1.91
RUNX1-217ENST00000494829 SPANXA2-OT1Q8N9U9 137 aa3.14□□□□□ -1.91
RUNX1-217ENST00000494829 C8orf87E5RJ46 101 aa3.14□□□□□ -1.91
RUNX1-217ENST00000494829 HRES1P13985 223 aa3.13□□□□□ -1.91
RUNX1-217ENST00000494829 Q5VSD8 79 aa3.13□□□□□ -1.91
RUNX1-217ENST00000494829 LIMD2Q9BT23 127 aa3.13□□□□□ -1.91
RUNX1-217ENST00000494829 A8MU10 97 aa3.13□□□□□ -1.91
RUNX1-217ENST00000494829 COA5Q86WW8 74 aa3.13□□□□□ -1.91
RUNX1-217ENST00000494829 KRTAP4-5Q9BYR2 181 aa3.13□□□□□ -1.91
RUNX1-217ENST00000494829 IGKV2-30P06310 120 aa3.12□□□□□ -1.91
RUNX1-217ENST00000494829 KRTAP10-8P60410 259 aa3.11□□□□□ -1.91
RUNX1-217ENST00000494829 PSPHP1O15172 72 aa3.11□□□□□ -1.91
RUNX1-217ENST00000494829 DMBT1Q9UGM3 2413 aaPredicted RBP3.1□□□□□ -1.91
RUNX1-217ENST00000494829 IGKV2D-30A0A075B6S6 120 aa3.1□□□□□ -1.91
RUNX1-217ENST00000494829 LOC101927531A0A1B0GV80 90 aa3.1□□□□□ -1.91
RUNX1-217ENST00000494829 MT1HL1P0DM35 61 aa3.1□□□□□ -1.91
RUNX1-217ENST00000494829 RPS29P62273 56 aaKnown RBP3.1□□□□□ -1.91
RUNX1-217ENST00000494829 A8MUN3 132 aa3.09□□□□□ -1.91
RUNX1-217ENST00000494829 Q1T7F1 81 aa3.09□□□□□ -1.91
RUNX1-217ENST00000494829 HERC2O95714 4834 aa3.08□□□□□ -1.92
RUNX1-217ENST00000494829 Q5VV11 94 aa3.07□□□□□ -1.92
RUNX1-217ENST00000494829 SPAG11AQ6PDA7 123 aa3.07□□□□□ -1.92
RUNX1-217ENST00000494829 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
RUNX1-217ENST00000494829 A8MUU9 505 aa3.07□□□□□ -1.92
RUNX1-217ENST00000494829 C20orf166-AS1Q96NR2 134 aa3.07□□□□□ -1.92
RUNX1-217ENST00000494829 DMAC1Q96GE9 116 aa3.06□□□□□ -1.92
RUNX1-217ENST00000494829 KRTAP19-1Q8IUB9 90 aa3.04□□□□□ -1.92
RUNX1-217ENST00000494829 MUC2Q02817 5179 aa3.03□□□□□ -1.92
RUNX1-217ENST00000494829 PRR15LQ9BU68 103 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms