RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 C8orf87E5RJ46 101 aa9.19□□□□□ -0.94
HDAC4-211ENST00000494800 A0A1B0GVX0 72 aa9.17□□□□□ -0.94
HDAC4-211ENST00000494800 C9orf118A6NHY6 69 aa9.17□□□□□ -0.94
HDAC4-211ENST00000494800 M0R2T5 61 aa9.16□□□□□ -0.94
HDAC4-211ENST00000494800 NDUFB1O75438 58 aa9.16□□□□□ -0.94
HDAC4-211ENST00000494800 KRTAP16-1A8MUX0 517 aa9.15□□□□□ -0.94
HDAC4-211ENST00000494800 C14orf132Q9NPU4 83 aa9.15□□□□□ -0.94
HDAC4-211ENST00000494800 NOTCH2NLQ7Z3S9 236 aa9.14□□□□□ -0.95
HDAC4-211ENST00000494800 A0A1W2PPM0 123 aa9.13□□□□□ -0.95
HDAC4-211ENST00000494800 H3BT86 120 aa9.11□□□□□ -0.95
HDAC4-211ENST00000494800 TAX1BP3O14907 124 aa9.11□□□□□ -0.95
HDAC4-211ENST00000494800 A8MWP4 228 aa9.07□□□□□ -0.96
HDAC4-211ENST00000494800 NREPQ16612 68 aa9.07□□□□□ -0.96
HDAC4-211ENST00000494800 KRTAP10-6P60371 365 aaPredicted RBP9.03□□□□□ -0.96
HDAC4-211ENST00000494800 LCE2DQ5TA82 110 aaPredicted RBP9.03□□□□□ -0.96
HDAC4-211ENST00000494800 MTURNQ8N3F0 131 aa9.03□□□□□ -0.96
HDAC4-211ENST00000494800 SPCS1Q9Y6A9 102 aa9.02□□□□□ -0.97
HDAC4-211ENST00000494800 C8orf17Q9NRJ1 99 aa9.01□□□□□ -0.97
HDAC4-211ENST00000494800 LORP23490 312 aaPredicted RBP9□□□□□ -0.97
HDAC4-211ENST00000494800 COL5A1-AS1Q5SY13 56 aa9□□□□□ -0.97
HDAC4-211ENST00000494800 RBM12B-AS1Q9P1G2 102 aa9□□□□□ -0.97
HDAC4-211ENST00000494800 IGKV3D-7A0A0C4DH55 119 aa8.99□□□□□ -0.97
HDAC4-211ENST00000494800 FAM236DA0A1B0GTK5 79 aa8.99□□□□□ -0.97
HDAC4-211ENST00000494800 FAM236CP0DP71 79 aa8.99□□□□□ -0.97
HDAC4-211ENST00000494800 ZCCHC13Q8WW36 166 aaKnown RBP8.99□□□□□ -0.97
HDAC4-211ENST00000494800 PRR15Q8IV56 129 aa8.97□□□□□ -0.97
HDAC4-211ENST00000494800 Q8N9P0 234 aaPredicted RBP8.97□□□□□ -0.97
HDAC4-211ENST00000494800 FLGP20930 4061 aaPredicted RBP8.97□□□□□ -0.97
HDAC4-211ENST00000494800 Q6ZVQ6 151 aa8.95□□□□□ -0.98
HDAC4-211ENST00000494800 BPY2O14599 106 aa8.91□□□□□ -0.98
HDAC4-211ENST00000494800 HRES1P13985 223 aa8.91□□□□□ -0.98
HDAC4-211ENST00000494800 KRTAP9-6A0A140TA67 174 aa8.9□□□□□ -0.98
HDAC4-211ENST00000494800 TMEM254Q8TBM7 123 aa8.89□□□□□ -0.99
HDAC4-211ENST00000494800 K7EQZ3 153 aa8.88□□□□□ -0.99
HDAC4-211ENST00000494800 SPINK7P58062 85 aa8.88□□□□□ -0.99
HDAC4-211ENST00000494800 MPLKIPQ8TAP9 179 aa8.88□□□□□ -0.99
HDAC4-211ENST00000494800 MRPL34Q9BQ48 92 aaKnown RBP8.88□□□□□ -0.99
HDAC4-211ENST00000494800 MMP24-AS1A0A0U1RRL7 71 aa8.87□□□□□ -0.99
HDAC4-211ENST00000494800 K7EP34 96 aa8.87□□□□□ -0.99
HDAC4-211ENST00000494800 hDV103S1A0JD37 113 aa8.86□□□□□ -0.99
HDAC4-211ENST00000494800 SMCPP49901 116 aaPredicted RBP8.85□□□□□ -0.99
HDAC4-211ENST00000494800 NDUFS5O43920 106 aa8.84□□□□□ -0.99
HDAC4-211ENST00000494800 GTF2H5Q6ZYL4 71 aa8.83□□□□□ -1
HDAC4-211ENST00000494800 UBL5Q9BZL1 73 aa8.81□□□□□ -1
HDAC4-211ENST00000494800 PRO0461Q9UI25 63 aa8.81□□□□□ -1
HDAC4-211ENST00000494800 PCP4L1A6NKN8 68 aa8.8□□□□□ -1
HDAC4-211ENST00000494800 WFDC13Q8IUB5 93 aa8.77□□□□□ -1.01
HDAC4-211ENST00000494800 CRCT1Q9UGL9 99 aa8.76□□□□□ -1.01
HDAC4-211ENST00000494800 CASC2Q6XLA1 102 aa8.75□□□□□ -1.01
HDAC4-211ENST00000494800 FSIP2Q5CZC0 6907 aa8.74□□□□□ -1.01
HDAC4-211ENST00000494800 F8W1H4 67 aa8.74□□□□□ -1.01
HDAC4-211ENST00000494800 Q8N9L7 120 aa8.74□□□□□ -1.01
HDAC4-211ENST00000494800 LINC00846Q9NV44 126 aa8.74□□□□□ -1.01
HDAC4-211ENST00000494800 KRTAP9-8Q9BYQ0 159 aa8.71□□□□□ -1.02
HDAC4-211ENST00000494800 HCG22E2RYF7 251 aa8.68□□□□□ -1.02
HDAC4-211ENST00000494800 IGKV2D-30A0A075B6S6 120 aa8.66□□□□□ -1.02
HDAC4-211ENST00000494800 IGKV2-30P06310 120 aa8.66□□□□□ -1.02
HDAC4-211ENST00000494800 CXCL6P80162 114 aa8.66□□□□□ -1.02
HDAC4-211ENST00000494800 C7orf65Q6ZTY9 151 aa8.66□□□□□ -1.02
HDAC4-211ENST00000494800 ETDBQ3ZM63 59 aa8.65□□□□□ -1.02
HDAC4-211ENST00000494800 Q5W150 140 aa8.62□□□□□ -1.03
HDAC4-211ENST00000494800 MT2AP02795 61 aa8.61□□□□□ -1.03
HDAC4-211ENST00000494800 H1FX-AS1Q4G0G2 97 aa8.58□□□□□ -1.04
HDAC4-211ENST00000494800 KRTAP10-10P60014 251 aa8.57□□□□□ -1.04
HDAC4-211ENST00000494800 TP53AIP1Q9HCN2 124 aa8.54□□□□□ -1.04
HDAC4-211ENST00000494800 MT1FP04733 61 aa8.53□□□□□ -1.04
HDAC4-211ENST00000494800 ACYP1P07311 99 aa8.53□□□□□ -1.04
HDAC4-211ENST00000494800 C4orf26Q17RF5 130 aa8.47□□□□□ -1.05
HDAC4-211ENST00000494800 FAM240AA0A1B0GVK7 77 aa8.46□□□□□ -1.06
HDAC4-211ENST00000494800 ATP5EP2Q5VTU8 51 aa8.44□□□□□ -1.06
HDAC4-211ENST00000494800 KRTAP9-3Q9BYQ3 159 aa8.43□□□□□ -1.06
HDAC4-211ENST00000494800 USH2AO75445 5202 aa8.39□□□□□ -1.07
HDAC4-211ENST00000494800 HIST1H4AP62805 103 aaKnown RBP8.37□□□□□ -1.07
HDAC4-211ENST00000494800 LCE2BO14633 110 aa8.36□□□□□ -1.07
HDAC4-211ENST00000494800 C1orf64Q8NEQ6 169 aa8.35□□□□□ -1.07
HDAC4-211ENST00000494800 TRAV22A0A0B4J277 110 aa8.33□□□□□ -1.08
HDAC4-211ENST00000494800 S4R3F8 94 aa8.31□□□□□ -1.08
HDAC4-211ENST00000494800 LOC101927531A0A1B0GV80 90 aa8.29□□□□□ -1.08
HDAC4-211ENST00000494800 LINC00643Q86TS7 51 aa8.29□□□□□ -1.08
HDAC4-211ENST00000494800 CYP4F30PQ9H0H9 118 aa8.29□□□□□ -1.08
HDAC4-211ENST00000494800 A0A1B0GV90 55 aa8.28□□□□□ -1.08
HDAC4-211ENST00000494800 C5orf47Q569G3 176 aa8.28□□□□□ -1.08
HDAC4-211ENST00000494800 KRTAP3-1Q9BYR8 98 aa8.28□□□□□ -1.08
HDAC4-211ENST00000494800 SSPOA2VEC9 5147 aa8.28□□□□□ -1.08
HDAC4-211ENST00000494800 UQCRQO14949 82 aa8.27□□□□□ -1.09
HDAC4-211ENST00000494800 ATOX1O00244 68 aa8.25□□□□□ -1.09
HDAC4-211ENST00000494800 CSAG1Q6PB30 78 aa8.25□□□□□ -1.09
HDAC4-211ENST00000494800 KRTAP19-1Q8IUB9 90 aa8.22□□□□□ -1.09
HDAC4-211ENST00000494800 FAM236AA0A1B0GUQ0 79 aa8.21□□□□□ -1.1
HDAC4-211ENST00000494800 FAM236BA0A1B0GV22 79 aa8.21□□□□□ -1.1
HDAC4-211ENST00000494800 H0Y9P7 68 aa8.21□□□□□ -1.1
HDAC4-211ENST00000494800 J3QR89 54 aa8.21□□□□□ -1.1
HDAC4-211ENST00000494800 LCA10Q71F78 164 aa8.21□□□□□ -1.1
HDAC4-211ENST00000494800 A0A087WVE0 104 aa8.2□□□□□ -1.1
HDAC4-211ENST00000494800 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.13□□□□□ -1.11
HDAC4-211ENST00000494800 FCGBPQ9Y6R7 5405 aaPredicted RBP8.1□□□□□ -1.11
HDAC4-211ENST00000494800 MP68P56378 58 aa8.1□□□□□ -1.11
HDAC4-211ENST00000494800 KRTAP19-6Q3LI70 58 aa8.09□□□□□ -1.11
HDAC4-211ENST00000494800 LINC00208Q96KT6 92 aa8.08□□□□□ -1.12
HDAC4-211ENST00000494800 A8MUN3 132 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms