RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 J3KT08 172 aa3.94□□□□□ -1.78
MSH5-217ENST00000494458 PLA2G1BP04054 148 aaKnown RBP3.94□□□□□ -1.78
MSH5-217ENST00000494458 RPS29P62273 56 aaKnown RBP3.94□□□□□ -1.78
MSH5-217ENST00000494458 SS18L2Q9UHA2 77 aa3.94□□□□□ -1.78
MSH5-217ENST00000494458 A0A087WVE0 104 aa3.93□□□□□ -1.78
MSH5-217ENST00000494458 PCP4P48539 62 aa3.93□□□□□ -1.78
MSH5-217ENST00000494458 FAM236AA0A1B0GUQ0 79 aa3.92□□□□□ -1.78
MSH5-217ENST00000494458 FAM236BA0A1B0GV22 79 aa3.92□□□□□ -1.78
MSH5-217ENST00000494458 PRR15Q8IV56 129 aa3.92□□□□□ -1.78
MSH5-217ENST00000494458 A8MWP4 228 aa3.91□□□□□ -1.78
MSH5-217ENST00000494458 KRTAP29-1A8MX34 341 aaPredicted RBP3.91□□□□□ -1.78
MSH5-217ENST00000494458 TNXBP22105 4242 aa3.91□□□□□ -1.78
MSH5-217ENST00000494458 K7EQZ3 153 aa3.9□□□□□ -1.79
MSH5-217ENST00000494458 ATOX1O00244 68 aa3.9□□□□□ -1.79
MSH5-217ENST00000494458 SPINK1P00995 79 aa3.9□□□□□ -1.79
MSH5-217ENST00000494458 KRTAP10-8P60410 259 aa3.9□□□□□ -1.79
MSH5-217ENST00000494458 SPAG11AQ6PDA7 123 aa3.9□□□□□ -1.79
MSH5-217ENST00000494458 Q8N9L7 120 aa3.9□□□□□ -1.79
MSH5-217ENST00000494458 EPPK1P58107 5090 aaKnown RBP3.89□□□□□ -1.79
MSH5-217ENST00000494458 Q8N1X5 172 aa3.89□□□□□ -1.79
MSH5-217ENST00000494458 PRR26Q8N8Z3 221 aa3.89□□□□□ -1.79
MSH5-217ENST00000494458 TYMSOSQ8TAI1 123 aa3.89□□□□□ -1.79
MSH5-217ENST00000494458 KIAA1109Q2LD37 5005 aa3.88□□□□□ -1.79
MSH5-217ENST00000494458 DEFB116Q30KQ4 102 aa3.88□□□□□ -1.79
MSH5-217ENST00000494458 C1orf195Q5TG92 126 aa3.88□□□□□ -1.79
MSH5-217ENST00000494458 Q5VSD8 79 aa3.88□□□□□ -1.79
MSH5-217ENST00000494458 HRCT1Q6UXD1 115 aa3.88□□□□□ -1.79
MSH5-217ENST00000494458 OCR1Q9BZK8 76 aa3.88□□□□□ -1.79
MSH5-217ENST00000494458 FAT3Q8TDW7 4589 aa3.87□□□□□ -1.79
MSH5-217ENST00000494458 SMIM20Q8N5G0 67 aa3.87□□□□□ -1.79
MSH5-217ENST00000494458 SERP2Q8N6R1 65 aa3.87□□□□□ -1.79
MSH5-217ENST00000494458 ANAPC13Q9BS18 74 aa3.87□□□□□ -1.79
MSH5-217ENST00000494458 TRAV7A0A075B6U4 112 aa3.86□□□□□ -1.79
MSH5-217ENST00000494458 MMP24-AS1A0A0U1RRL7 71 aa3.86□□□□□ -1.79
MSH5-217ENST00000494458 A0A1B0GVX0 72 aa3.86□□□□□ -1.79
MSH5-217ENST00000494458 HCG22E2RYF7 251 aa3.86□□□□□ -1.79
MSH5-217ENST00000494458 COX7CP15954 63 aa3.86□□□□□ -1.79
MSH5-217ENST00000494458 LINC00304Q8N9R0 145 aa3.86□□□□□ -1.79
MSH5-217ENST00000494458 LIMD2Q9BT23 127 aa3.86□□□□□ -1.79
MSH5-217ENST00000494458 UQCRQO14949 82 aa3.85□□□□□ -1.79
MSH5-217ENST00000494458 NDUFB1O75438 58 aa3.85□□□□□ -1.79
MSH5-217ENST00000494458 LRP1Q07954 4544 aaKnown RBP3.85□□□□□ -1.79
MSH5-217ENST00000494458 C8orf17Q9NRJ1 99 aa3.83□□□□□ -1.8
MSH5-217ENST00000494458 C8orf87E5RJ46 101 aa3.82□□□□□ -1.8
MSH5-217ENST00000494458 CCDC179H3BU77 68 aa3.82□□□□□ -1.8
MSH5-217ENST00000494458 MT1HL1P0DM35 61 aa3.82□□□□□ -1.8
MSH5-217ENST00000494458 CASC2Q6XLA1 102 aa3.82□□□□□ -1.8
MSH5-217ENST00000494458 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
MSH5-217ENST00000494458 hDV103S1A0JD37 113 aa3.81□□□□□ -1.8
MSH5-217ENST00000494458 TMEM254Q8TBM7 123 aa3.81□□□□□ -1.8
MSH5-217ENST00000494458 FLG2Q5D862 2391 aaPredicted RBP3.81□□□□□ -1.8
MSH5-217ENST00000494458 KRTAP16-1A8MUX0 517 aa3.8□□□□□ -1.8
MSH5-217ENST00000494458 KLKP1Q107X0 134 aa3.8□□□□□ -1.8
MSH5-217ENST00000494458 IGHV6-1A0A0B4J1U7 121 aa3.79□□□□□ -1.8
MSH5-217ENST00000494458 OXTP01178 125 aa3.79□□□□□ -1.8
MSH5-217ENST00000494458 C5orf47Q569G3 176 aa3.79□□□□□ -1.8
MSH5-217ENST00000494458 Q8N9P0 234 aaPredicted RBP3.79□□□□□ -1.8
MSH5-217ENST00000494458 MRPL34Q9BQ48 92 aaKnown RBP3.79□□□□□ -1.8
MSH5-217ENST00000494458 A0A0U1RQV1 116 aa3.78□□□□□ -1.8
MSH5-217ENST00000494458 LINC00313P59037 77 aa3.78□□□□□ -1.8
MSH5-217ENST00000494458 KRTAP13-3Q3SY46 172 aa3.78□□□□□ -1.8
MSH5-217ENST00000494458 WFDC13Q8IUB5 93 aa3.78□□□□□ -1.8
MSH5-217ENST00000494458 ZCCHC13Q8WW36 166 aaKnown RBP3.78□□□□□ -1.8
MSH5-217ENST00000494458 TP53AIP1Q9HCN2 124 aa3.78□□□□□ -1.8
MSH5-217ENST00000494458 BIRC6Q9NR09 4857 aa3.77□□□□□ -1.81
MSH5-217ENST00000494458 MYCBP2O75592 4640 aa3.77□□□□□ -1.81
MSH5-217ENST00000494458 HERC2O95714 4834 aa3.77□□□□□ -1.81
MSH5-217ENST00000494458 H3BPC8 53 aa3.76□□□□□ -1.81
MSH5-217ENST00000494458 CYSTM1Q9H1C7 97 aa3.76□□□□□ -1.81
MSH5-217ENST00000494458 FP248Q71RG6 208 aaPredicted RBP3.75□□□□□ -1.81
MSH5-217ENST00000494458 H7BZZ5 65 aa3.74□□□□□ -1.81
MSH5-217ENST00000494458 C20orf197Q8N268 126 aa3.74□□□□□ -1.81
MSH5-217ENST00000494458 NDUFC1O43677 76 aa3.73□□□□□ -1.81
MSH5-217ENST00000494458 C20orf166-AS1Q96NR2 134 aa3.73□□□□□ -1.81
MSH5-217ENST00000494458 DMBT1Q9UGM3 2413 aaPredicted RBP3.72□□□□□ -1.81
MSH5-217ENST00000494458 TRAV22A0A0B4J277 110 aa3.72□□□□□ -1.81
MSH5-217ENST00000494458 A8MUU9 505 aa3.72□□□□□ -1.81
MSH5-217ENST00000494458 Q5W150 140 aa3.72□□□□□ -1.81
MSH5-217ENST00000494458 H0Y9P7 68 aa3.7□□□□□ -1.82
MSH5-217ENST00000494458 MP68P56378 58 aa3.7□□□□□ -1.82
MSH5-217ENST00000494458 SNURFQ9Y675 71 aa3.7□□□□□ -1.82
MSH5-217ENST00000494458 TMEM258P61165 79 aa3.69□□□□□ -1.82
MSH5-217ENST00000494458 ABCA13Q86UQ4 5058 aa3.69□□□□□ -1.82
MSH5-217ENST00000494458 Q75L30 129 aa3.68□□□□□ -1.82
MSH5-217ENST00000494458 C1orf64Q8NEQ6 169 aa3.68□□□□□ -1.82
MSH5-217ENST00000494458 LINC00208Q96KT6 92 aa3.68□□□□□ -1.82
MSH5-217ENST00000494458 RETNLBQ9BQ08 111 aa3.68□□□□□ -1.82
MSH5-217ENST00000494458 IGLV7-46A0A075B6I9 117 aa3.66□□□□□ -1.82
MSH5-217ENST00000494458 LOC101927531A0A1B0GV80 90 aa3.66□□□□□ -1.82
MSH5-217ENST00000494458 NDUFS5O43920 106 aa3.66□□□□□ -1.82
MSH5-217ENST00000494458 SPANXA2-OT1Q8N9U9 137 aa3.66□□□□□ -1.82
MSH5-217ENST00000494458 CYP4F30PQ9H0H9 118 aa3.66□□□□□ -1.82
MSH5-217ENST00000494458 RPS28P62857 69 aaKnown RBP3.65□□□□□ -1.83
MSH5-217ENST00000494458 TPRXLQ17RH7 258 aa3.65□□□□□ -1.83
MSH5-217ENST00000494458 IGKV2-30P06310 120 aa3.64□□□□□ -1.83
MSH5-217ENST00000494458 ATP5EP56381 51 aaPredicted RBP3.64□□□□□ -1.83
MSH5-217ENST00000494458 C9orf92A6NGG3 77 aa3.63□□□□□ -1.83
MSH5-217ENST00000494458 RPL37P61927 97 aaKnown RBP3.62□□□□□ -1.83
MSH5-217ENST00000494458 FAM236DA0A1B0GTK5 79 aa3.61□□□□□ -1.83
MSH5-217ENST00000494458 FAM236CP0DP71 79 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms