RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 LCE2AQ5TA79 106 aaPredicted RBP12.4□□□□□ -0.42
CLIC3-203ENST00000494426 A8MUU9 505 aa12.39□□□□□ -0.43
CLIC3-203ENST00000494426 LINC00313P59037 77 aa12.39□□□□□ -0.43
CLIC3-203ENST00000494426 SMCPP49901 116 aaPredicted RBP12.38□□□□□ -0.43
CLIC3-203ENST00000494426 KRTAP16-1A8MUX0 517 aa12.37□□□□□ -0.43
CLIC3-203ENST00000494426 ATP11AUNQ6ZP68 121 aa12.35□□□□□ -0.43
CLIC3-203ENST00000494426 IGHV6-1A0A0B4J1U7 121 aa12.34□□□□□ -0.43
CLIC3-203ENST00000494426 J3KT08 172 aa12.33□□□□□ -0.44
CLIC3-203ENST00000494426 K7EP34 96 aa12.33□□□□□ -0.44
CLIC3-203ENST00000494426 KRTAP19-2Q3LHN2 52 aa12.33□□□□□ -0.44
CLIC3-203ENST00000494426 PRO0461Q9UI25 63 aa12.33□□□□□ -0.44
CLIC3-203ENST00000494426 A0A1B0GVX0 72 aa12.32□□□□□ -0.44
CLIC3-203ENST00000494426 LCE2CQ5TA81 110 aa12.3□□□□□ -0.44
CLIC3-203ENST00000494426 C8orf87E5RJ46 101 aa12.26□□□□□ -0.45
CLIC3-203ENST00000494426 NREPQ16612 68 aa12.24□□□□□ -0.45
CLIC3-203ENST00000494426 A8MWP4 228 aa12.22□□□□□ -0.45
CLIC3-203ENST00000494426 IGKV3D-7A0A0C4DH55 119 aa12.2□□□□□ -0.46
CLIC3-203ENST00000494426 NDUFB1O75438 58 aa12.2□□□□□ -0.46
CLIC3-203ENST00000494426 GTF2H5Q6ZYL4 71 aa12.19□□□□□ -0.46
CLIC3-203ENST00000494426 C8orf17Q9NRJ1 99 aa12.14□□□□□ -0.47
CLIC3-203ENST00000494426 PRR15Q8IV56 129 aa12.13□□□□□ -0.47
CLIC3-203ENST00000494426 F8W1H4 67 aa12.1□□□□□ -0.47
CLIC3-203ENST00000494426 MT1HP80294 61 aa12.09□□□□□ -0.47
CLIC3-203ENST00000494426 Q6ZVQ6 151 aa12.09□□□□□ -0.47
CLIC3-203ENST00000494426 Q8N9P0 234 aaPredicted RBP12.09□□□□□ -0.47
CLIC3-203ENST00000494426 K7EQZ3 153 aa12.06□□□□□ -0.48
CLIC3-203ENST00000494426 BPY2O14599 106 aa12.05□□□□□ -0.48
CLIC3-203ENST00000494426 MMP24-AS1A0A0U1RRL7 71 aa12.04□□□□□ -0.48
CLIC3-203ENST00000494426 LINC00846Q9NV44 126 aa12.04□□□□□ -0.48
CLIC3-203ENST00000494426 ETDBQ3ZM63 59 aa12.03□□□□□ -0.48
CLIC3-203ENST00000494426 COX6B2Q6YFQ2 88 aa12.02□□□□□ -0.49
CLIC3-203ENST00000494426 ZCCHC13Q8WW36 166 aaKnown RBP12.01□□□□□ -0.49
CLIC3-203ENST00000494426 TMEM254Q8TBM7 123 aa11.96□□□□□ -0.49
CLIC3-203ENST00000494426 Q8N9L7 120 aa11.95□□□□□ -0.5
CLIC3-203ENST00000494426 MRPL34Q9BQ48 92 aaKnown RBP11.95□□□□□ -0.5
CLIC3-203ENST00000494426 UBL5Q9BZL1 73 aa11.95□□□□□ -0.5
CLIC3-203ENST00000494426 hDV103S1A0JD37 113 aa11.93□□□□□ -0.5
CLIC3-203ENST00000494426 HRES1P13985 223 aa11.92□□□□□ -0.5
CLIC3-203ENST00000494426 FSIP2Q5CZC0 6907 aa11.91□□□□□ -0.5
CLIC3-203ENST00000494426 CRCT1Q9UGL9 99 aa11.91□□□□□ -0.5
CLIC3-203ENST00000494426 FLGP20930 4061 aaPredicted RBP11.9□□□□□ -0.5
CLIC3-203ENST00000494426 MPLKIPQ8TAP9 179 aa11.88□□□□□ -0.51
CLIC3-203ENST00000494426 SPINK7P58062 85 aa11.84□□□□□ -0.51
CLIC3-203ENST00000494426 WFDC13Q8IUB5 93 aa11.84□□□□□ -0.51
CLIC3-203ENST00000494426 A0A1B0GV90 55 aa11.81□□□□□ -0.52
CLIC3-203ENST00000494426 M0R2T5 61 aa11.81□□□□□ -0.52
CLIC3-203ENST00000494426 LCE2DQ5TA82 110 aaPredicted RBP11.81□□□□□ -0.52
CLIC3-203ENST00000494426 CASC2Q6XLA1 102 aa11.81□□□□□ -0.52
CLIC3-203ENST00000494426 NDUFS5O43920 106 aa11.8□□□□□ -0.52
CLIC3-203ENST00000494426 KRTAP10-6P60371 365 aaPredicted RBP11.8□□□□□ -0.52
CLIC3-203ENST00000494426 LORP23490 312 aaPredicted RBP11.79□□□□□ -0.52
CLIC3-203ENST00000494426 RBM12B-AS1Q9P1G2 102 aa11.77□□□□□ -0.53
CLIC3-203ENST00000494426 CXCL6P80162 114 aa11.74□□□□□ -0.53
CLIC3-203ENST00000494426 Q5W150 140 aa11.74□□□□□ -0.53
CLIC3-203ENST00000494426 FAM236DA0A1B0GTK5 79 aa11.73□□□□□ -0.53
CLIC3-203ENST00000494426 HCG22E2RYF7 251 aa11.73□□□□□ -0.53
CLIC3-203ENST00000494426 FAM236CP0DP71 79 aa11.73□□□□□ -0.53
CLIC3-203ENST00000494426 ACYP1P07311 99 aa11.71□□□□□ -0.53
CLIC3-203ENST00000494426 FAM240AA0A1B0GVK7 77 aa11.67□□□□□ -0.54
CLIC3-203ENST00000494426 IGKV2D-30A0A075B6S6 120 aa11.57□□□□□ -0.56
CLIC3-203ENST00000494426 IGKV2-30P06310 120 aa11.57□□□□□ -0.56
CLIC3-203ENST00000494426 C7orf65Q6ZTY9 151 aa11.54□□□□□ -0.56
CLIC3-203ENST00000494426 ATP5EP2Q5VTU8 51 aa11.51□□□□□ -0.57
CLIC3-203ENST00000494426 KRTAP9-8Q9BYQ0 159 aa11.51□□□□□ -0.57
CLIC3-203ENST00000494426 TP53AIP1Q9HCN2 124 aa11.48□□□□□ -0.57
CLIC3-203ENST00000494426 LINC00643Q86TS7 51 aa11.46□□□□□ -0.57
CLIC3-203ENST00000494426 HIST1H4AP62805 103 aaKnown RBP11.43□□□□□ -0.58
CLIC3-203ENST00000494426 H1FX-AS1Q4G0G2 97 aa11.39□□□□□ -0.59
CLIC3-203ENST00000494426 C4orf26Q17RF5 130 aa11.37□□□□□ -0.59
CLIC3-203ENST00000494426 MT2AP02795 61 aa11.36□□□□□ -0.59
CLIC3-203ENST00000494426 A0A087WVE0 104 aa11.35□□□□□ -0.59
CLIC3-203ENST00000494426 J3QR89 54 aa11.32□□□□□ -0.6
CLIC3-203ENST00000494426 KRTAP9-7A8MTY7 169 aa11.29□□□□□ -0.6
CLIC3-203ENST00000494426 MT1FP04733 61 aa11.28□□□□□ -0.6
CLIC3-203ENST00000494426 KRTAP3-1Q9BYR8 98 aa11.27□□□□□ -0.61
CLIC3-203ENST00000494426 TRAV22A0A0B4J277 110 aa11.26□□□□□ -0.61
CLIC3-203ENST00000494426 CYP4F30PQ9H0H9 118 aa11.24□□□□□ -0.61
CLIC3-203ENST00000494426 UQCRQO14949 82 aa11.23□□□□□ -0.61
CLIC3-203ENST00000494426 C1orf64Q8NEQ6 169 aa11.19□□□□□ -0.62
CLIC3-203ENST00000494426 LOC101927531A0A1B0GV80 90 aa11.18□□□□□ -0.62
CLIC3-203ENST00000494426 KRTAP10-10P60014 251 aa11.18□□□□□ -0.62
CLIC3-203ENST00000494426 H0Y9P7 68 aa11.15□□□□□ -0.62
CLIC3-203ENST00000494426 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.13□□□□□ -0.63
CLIC3-203ENST00000494426 KRTAP9-3Q9BYQ3 159 aa11.13□□□□□ -0.63
CLIC3-203ENST00000494426 OCR1Q9BZK8 76 aa11.12□□□□□ -0.63
CLIC3-203ENST00000494426 ATOX1O00244 68 aa11.1□□□□□ -0.63
CLIC3-203ENST00000494426 K7ERU9 68 aa11.05□□□□□ -0.64
CLIC3-203ENST00000494426 S4R3F8 94 aa11.04□□□□□ -0.64
CLIC3-203ENST00000494426 LCE2BO14633 110 aa11.02□□□□□ -0.65
CLIC3-203ENST00000494426 C5orf47Q569G3 176 aa11.01□□□□□ -0.65
CLIC3-203ENST00000494426 LCA10Q71F78 164 aa11.01□□□□□ -0.65
CLIC3-203ENST00000494426 LINC00208Q96KT6 92 aa11.01□□□□□ -0.65
CLIC3-203ENST00000494426 MT-ATP8P03928 68 aa10.99□□□□□ -0.65
CLIC3-203ENST00000494426 IMUPQ9GZP8 106 aa10.97□□□□□ -0.65
CLIC3-203ENST00000494426 USH2AO75445 5202 aa10.95□□□□□ -0.66
CLIC3-203ENST00000494426 MP68P56378 58 aa10.95□□□□□ -0.66
CLIC3-203ENST00000494426 KLKP1Q107X0 134 aa10.95□□□□□ -0.66
CLIC3-203ENST00000494426 SCGB1A1P11684 91 aa10.93□□□□□ -0.66
CLIC3-203ENST00000494426 KRTAP3-3Q9BYR6 98 aa10.93□□□□□ -0.66
CLIC3-203ENST00000494426 CSAG1Q6PB30 78 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms