RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 ZNF861PO60384 105 aa7.38□□□□□ -1.23
PHF3-205ENST00000494284 KRTAP10-1P60331 282 aa7.38□□□□□ -1.23
PHF3-205ENST00000494284 SACSQ9NZJ4 4579 aa7.37□□□□□ -1.23
PHF3-205ENST00000494284 CDK2AP2O75956 126 aa7.34□□□□□ -1.23
PHF3-205ENST00000494284 IGLV7-43P04211 117 aa7.34□□□□□ -1.24
PHF3-205ENST00000494284 C8orf17Q9NRJ1 99 aa7.34□□□□□ -1.24
PHF3-205ENST00000494284 LINC00483Q53H64 154 aa7.33□□□□□ -1.24
PHF3-205ENST00000494284 RETNLBQ9BQ08 111 aa7.33□□□□□ -1.24
PHF3-205ENST00000494284 A8MUN3 132 aa7.3□□□□□ -1.24
PHF3-205ENST00000494284 ZNF706Q9Y5V0 76 aaPredicted RBP7.3□□□□□ -1.24
PHF3-205ENST00000494284 KMT2CQ8NEZ4 4911 aaKnown RBP7.3□□□□□ -1.24
PHF3-205ENST00000494284 A0A1B0GVX0 72 aa7.3□□□□□ -1.24
PHF3-205ENST00000494284 PRO0628Q9UI54 55 aa7.3□□□□□ -1.24
PHF3-205ENST00000494284 A8MU10 97 aa7.29□□□□□ -1.24
PHF3-205ENST00000494284 FAT1Q14517 4588 aa7.29□□□□□ -1.24
PHF3-205ENST00000494284 CD164Q04900 197 aa7.28□□□□□ -1.24
PHF3-205ENST00000494284 CYP4F30PQ9H0H9 118 aa7.27□□□□□ -1.25
PHF3-205ENST00000494284 Q5W150 140 aa7.24□□□□□ -1.25
PHF3-205ENST00000494284 MRPL34Q9BQ48 92 aaKnown RBP7.24□□□□□ -1.25
PHF3-205ENST00000494284 KRTAP13-2Q52LG2 175 aa7.23□□□□□ -1.25
PHF3-205ENST00000494284 SMR3BP02814 79 aaPredicted RBP7.23□□□□□ -1.25
PHF3-205ENST00000494284 COA5Q86WW8 74 aa7.23□□□□□ -1.25
PHF3-205ENST00000494284 DYNC1H1Q14204 4646 aaKnown RBP7.22□□□□□ -1.25
PHF3-205ENST00000494284 Q1T7F1 81 aa7.22□□□□□ -1.25
PHF3-205ENST00000494284 SPAG11AQ6PDA7 123 aa7.2□□□□□ -1.26
PHF3-205ENST00000494284 PRR15LQ9BU68 103 aa7.2□□□□□ -1.26
PHF3-205ENST00000494284 Q6ZSA8 131 aa7.2□□□□□ -1.26
PHF3-205ENST00000494284 ASB16-AS1Q495Z4 193 aa7.19□□□□□ -1.26
PHF3-205ENST00000494284 H3BPC8 53 aa7.19□□□□□ -1.26
PHF3-205ENST00000494284 SPANXA2-OT1Q8N9U9 137 aa7.18□□□□□ -1.26
PHF3-205ENST00000494284 TP53AIP1Q9HCN2 124 aa7.18□□□□□ -1.26
PHF3-205ENST00000494284 Q8N9P0 234 aaPredicted RBP7.18□□□□□ -1.26
PHF3-205ENST00000494284 IGLV7-46A0A075B6I9 117 aa7.17□□□□□ -1.26
PHF3-205ENST00000494284 CHKB-CPT1BH3BT56 60 aa7.17□□□□□ -1.26
PHF3-205ENST00000494284 Q5VV11 94 aa7.15□□□□□ -1.26
PHF3-205ENST00000494284 KRTAP1-4P0C5Y4 121 aa7.15□□□□□ -1.27
PHF3-205ENST00000494284 HRES1P13985 223 aa7.13□□□□□ -1.27
PHF3-205ENST00000494284 PRR26Q8N8Z3 221 aa7.13□□□□□ -1.27
PHF3-205ENST00000494284 RYR2Q92736 4967 aa7.11□□□□□ -1.27
PHF3-205ENST00000494284 APOBP04114 4563 aaKnown RBP7.11□□□□□ -1.27
PHF3-205ENST00000494284 PLA2G1BP04054 148 aaKnown RBP7.1□□□□□ -1.27
PHF3-205ENST00000494284 LINC00313P59037 77 aa7.1□□□□□ -1.27
PHF3-205ENST00000494284 C1orf195Q5TG92 126 aa7.1□□□□□ -1.27
PHF3-205ENST00000494284 SPTSSBQ8NFR3 76 aa7.1□□□□□ -1.27
PHF3-205ENST00000494284 SSBP3-AS1Q7Z2R9 100 aa7.09□□□□□ -1.27
PHF3-205ENST00000494284 A6NED7 52 aa7.08□□□□□ -1.28
PHF3-205ENST00000494284 RYR3Q15413 4870 aa7.05□□□□□ -1.28
PHF3-205ENST00000494284 LRP1Q07954 4544 aaKnown RBP7.05□□□□□ -1.28
PHF3-205ENST00000494284 IGKV2D-30A0A075B6S6 120 aa7.05□□□□□ -1.28
PHF3-205ENST00000494284 IGKV2-30P06310 120 aa7.05□□□□□ -1.28
PHF3-205ENST00000494284 LIMD2Q9BT23 127 aa7.05□□□□□ -1.28
PHF3-205ENST00000494284 V9GYY9 64 aa7.05□□□□□ -1.28
PHF3-205ENST00000494284 LOC101927531A0A1B0GV80 90 aa7.03□□□□□ -1.28
PHF3-205ENST00000494284 KRTAP13-3Q3SY46 172 aa7.03□□□□□ -1.28
PHF3-205ENST00000494284 TYMSOSQ8TAI1 123 aa7.02□□□□□ -1.28
PHF3-205ENST00000494284 C4orf48Q5BLP8 95 aa7.01□□□□□ -1.29
PHF3-205ENST00000494284 LCA10Q71F78 164 aa7.01□□□□□ -1.29
PHF3-205ENST00000494284 A0A1B0GVY2 172 aa7□□□□□ -1.29
PHF3-205ENST00000494284 SPINK7P58062 85 aa6.99□□□□□ -1.29
PHF3-205ENST00000494284 PMAIP1Q13794 54 aa6.99□□□□□ -1.29
PHF3-205ENST00000494284 PKHD1L1Q86WI1 4243 aa6.98□□□□□ -1.29
PHF3-205ENST00000494284 C8orf87E5RJ46 101 aa6.97□□□□□ -1.29
PHF3-205ENST00000494284 FLG2Q5D862 2391 aaPredicted RBP6.95□□□□□ -1.3
PHF3-205ENST00000494284 FAM229AH3BQW9 127 aa6.95□□□□□ -1.3
PHF3-205ENST00000494284 C9orf92A6NGG3 77 aa6.94□□□□□ -1.3
PHF3-205ENST00000494284 KRTAP16-1A8MUX0 517 aa6.94□□□□□ -1.3
PHF3-205ENST00000494284 Q75L30 129 aa6.94□□□□□ -1.3
PHF3-205ENST00000494284 SPINK1P00995 79 aa6.94□□□□□ -1.3
PHF3-205ENST00000494284 ACYP2P14621 99 aa6.93□□□□□ -1.3
PHF3-205ENST00000494284 LINC01558Q9Y6Z2 57 aa6.93□□□□□ -1.3
PHF3-205ENST00000494284 MYCBP2O75592 4640 aa6.92□□□□□ -1.3
PHF3-205ENST00000494284 KRTAP10-4P60372 401 aaPredicted RBP6.91□□□□□ -1.3
PHF3-205ENST00000494284 Q8N1X5 172 aa6.91□□□□□ -1.3
PHF3-205ENST00000494284 LINC00304Q8N9R0 145 aa6.9□□□□□ -1.3
PHF3-205ENST00000494284 HSPG2P98160 4391 aa6.89□□□□□ -1.31
PHF3-205ENST00000494284 C7orf65Q6ZTY9 151 aa6.89□□□□□ -1.31
PHF3-205ENST00000494284 KRTAP17-1Q9BYP8 105 aa6.88□□□□□ -1.31
PHF3-205ENST00000494284 DMAC1Q96GE9 116 aa6.88□□□□□ -1.31
PHF3-205ENST00000494284 KIAA1109Q2LD37 5005 aa6.88□□□□□ -1.31
PHF3-205ENST00000494284 DMBT1Q9UGM3 2413 aaPredicted RBP6.86□□□□□ -1.31
PHF3-205ENST00000494284 CDC42SE1Q9NRR8 79 aa6.83□□□□□ -1.32
PHF3-205ENST00000494284 EPPK1P58107 5090 aaKnown RBP6.83□□□□□ -1.32
PHF3-205ENST00000494284 A0A1B0GU69 56 aa6.82□□□□□ -1.32
PHF3-205ENST00000494284 TNXBP22105 4242 aa6.81□□□□□ -1.32
PHF3-205ENST00000494284 ATP11AUNQ6ZP68 121 aa6.79□□□□□ -1.32
PHF3-205ENST00000494284 FAT3Q8TDW7 4589 aa6.79□□□□□ -1.32
PHF3-205ENST00000494284 RYR1P21817 5038 aa6.74□□□□□ -1.33
PHF3-205ENST00000494284 A6NN06 94 aa6.74□□□□□ -1.33
PHF3-205ENST00000494284 RPS29P62273 56 aaKnown RBP6.74□□□□□ -1.33
PHF3-205ENST00000494284 LPAP08519 4548 aa6.73□□□□□ -1.33
PHF3-205ENST00000494284 Q5VSD8 79 aa6.71□□□□□ -1.33
PHF3-205ENST00000494284 SEC61GP60059 68 aa6.7□□□□□ -1.34
PHF3-205ENST00000494284 KTN1-AS1Q86SY8 53 aa6.7□□□□□ -1.34
PHF3-205ENST00000494284 ADM2Q7Z4H4 148 aa6.68□□□□□ -1.34
PHF3-205ENST00000494284 PRAC1Q96KF2 57 aa6.67□□□□□ -1.34
PHF3-205ENST00000494284 MIR22HGQ0VDD5 57 aa6.66□□□□□ -1.34
PHF3-205ENST00000494284 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.34
PHF3-205ENST00000494284 UQCR11O14957 56 aa6.63□□□□□ -1.35
PHF3-205ENST00000494284 KRTAP3-1Q9BYR8 98 aa6.63□□□□□ -1.35
PHF3-205ENST00000494284 RBM12B-AS1Q9P1G2 102 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms