RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 TRGV1A0A0A0MS02 117 aa1.45□□□□□ -2.18
GTF3A-208ENST00000493903 LINC01600Q96MT4 127 aa1.45□□□□□ -2.18
GTF3A-208ENST00000493903 AQP10Q96PS8 301 aa1.45□□□□□ -2.18
GTF3A-208ENST00000493903 TRGV9Q99603 122 aa1.45□□□□□ -2.18
GTF3A-208ENST00000493903 PRO0255Q9UI72 69 aa1.45□□□□□ -2.18
GTF3A-208ENST00000493903 CEBPZOSA8MTT3 80 aa1.44□□□□□ -2.18
GTF3A-208ENST00000493903 SNRPGP15A8MWD9 76 aa1.44□□□□□ -2.18
GTF3A-208ENST00000493903 SFTA3P0C7M3 94 aa1.44□□□□□ -2.18
GTF3A-208ENST00000493903 TDRG1Q3Y452 100 aa1.44□□□□□ -2.18
GTF3A-208ENST00000493903 CYP4F30PQ9H0H9 118 aa1.44□□□□□ -2.18
GTF3A-208ENST00000493903 UBE2L5PA0A1B0GUS4 154 aa1.43□□□□□ -2.18
GTF3A-208ENST00000493903 TMEM218A2RU14 115 aa1.43□□□□□ -2.18
GTF3A-208ENST00000493903 CFDP00746 253 aaPredicted RBP1.43□□□□□ -2.18
GTF3A-208ENST00000493903 IGLC2P0DOY2 106 aa1.43□□□□□ -2.18
GTF3A-208ENST00000493903 UBE2L3P68036 154 aaKnown RBP1.43□□□□□ -2.18
GTF3A-208ENST00000493903 PLAC4Q8WY50 150 aa1.43□□□□□ -2.18
GTF3A-208ENST00000493903 CRCT1Q9UGL9 99 aa1.43□□□□□ -2.18
GTF3A-208ENST00000493903 V9GYV3 84 aa1.43□□□□□ -2.18
GTF3A-208ENST00000493903 CRYM-AS1A6NIL9 109 aa1.42□□□□□ -2.18
GTF3A-208ENST00000493903 H3BQ15 152 aa1.42□□□□□ -2.18
GTF3A-208ENST00000493903 SPINK8P0C7L1 97 aa1.42□□□□□ -2.18
GTF3A-208ENST00000493903 IAPPP10997 89 aa1.42□□□□□ -2.18
GTF3A-208ENST00000493903 S100A16Q96FQ6 103 aaKnown RBP1.42□□□□□ -2.18
GTF3A-208ENST00000493903 DPH3P1Q9H4G8 78 aa1.42□□□□□ -2.18
GTF3A-208ENST00000493903 CACFD1Q9UGQ2 172 aa1.42□□□□□ -2.18
GTF3A-208ENST00000493903 M0R3E3 92 aa1.41□□□□□ -2.18
GTF3A-208ENST00000493903 NMBP08949 121 aa1.41□□□□□ -2.18
GTF3A-208ENST00000493903 SSPOA2VEC9 5147 aa1.41□□□□□ -2.18
GTF3A-208ENST00000493903 S100A8P05109 93 aa1.4□□□□□ -2.19
GTF3A-208ENST00000493903 MGST2Q99735 147 aa1.4□□□□□ -2.19
GTF3A-208ENST00000493903 PLAC8Q9NZF1 115 aa1.4□□□□□ -2.19
GTF3A-208ENST00000493903 USH2AO75445 5202 aa1.4□□□□□ -2.19
GTF3A-208ENST00000493903 TMEM262E9PQX1 116 aa1.39□□□□□ -2.19
GTF3A-208ENST00000493903 RPL37P61927 97 aaKnown RBP1.39□□□□□ -2.19
GTF3A-208ENST00000493903 CFAP126Q5VTH2 177 aa1.39□□□□□ -2.19
GTF3A-208ENST00000493903 C10orf113Q5VZT2 155 aa1.39□□□□□ -2.19
GTF3A-208ENST00000493903 SPINK6Q6UWN8 80 aa1.39□□□□□ -2.19
GTF3A-208ENST00000493903 ENHOQ6UWT2 76 aa1.39□□□□□ -2.19
GTF3A-208ENST00000493903 A0A087WWC5 75 aa1.38□□□□□ -2.19
GTF3A-208ENST00000493903 SMIM31A0A1B0GVY4 71 aa1.38□□□□□ -2.19
GTF3A-208ENST00000493903 SFT2D2O95562 160 aa1.38□□□□□ -2.19
GTF3A-208ENST00000493903 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
GTF3A-208ENST00000493903 SMIM4Q8WVI0 70 aa1.38□□□□□ -2.19
GTF3A-208ENST00000493903 FAM167A-AS1Q96KT0 104 aa1.38□□□□□ -2.19
GTF3A-208ENST00000493903 NPVFQ9HCQ7 196 aa1.38□□□□□ -2.19
GTF3A-208ENST00000493903 PSENENQ9NZ42 101 aa1.38□□□□□ -2.19
GTF3A-208ENST00000493903 Q0VG73 95 aa1.37□□□□□ -2.19
GTF3A-208ENST00000493903 SCP2D1Q9UJQ7 156 aa1.37□□□□□ -2.19
GTF3A-208ENST00000493903 LENEPQ9Y5L5 61 aa1.37□□□□□ -2.19
GTF3A-208ENST00000493903 A0A096LNI7 61 aa1.36□□□□□ -2.19
GTF3A-208ENST00000493903 TRAV21A0A0B4J279 112 aa1.36□□□□□ -2.19
GTF3A-208ENST00000493903 UBE2D3P61077 147 aa1.36□□□□□ -2.19
GTF3A-208ENST00000493903 UBE2D2P62837 147 aa1.36□□□□□ -2.19
GTF3A-208ENST00000493903 Q96NJ1 140 aa1.36□□□□□ -2.19
GTF3A-208ENST00000493903 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
GTF3A-208ENST00000493903 TRBV7-3A0A075B6L6 115 aa1.35□□□□□ -2.19
GTF3A-208ENST00000493903 COX6A2Q02221 97 aa1.35□□□□□ -2.19
GTF3A-208ENST00000493903 CLPSL2Q6UWE3 100 aa1.35□□□□□ -2.19
GTF3A-208ENST00000493903 M0R143 59 aa1.34□□□□□ -2.19
GTF3A-208ENST00000493903 PKIAP61925 76 aa1.34□□□□□ -2.19
GTF3A-208ENST00000493903 SNHG12Q9BXW3 62 aa1.34□□□□□ -2.19
GTF3A-208ENST00000493903 KRTAP4-1Q9BYQ7 146 aa1.34□□□□□ -2.19
GTF3A-208ENST00000493903 LINC00474Q9P2X8 69 aa1.34□□□□□ -2.19
GTF3A-208ENST00000493903 FLGP20930 4061 aaPredicted RBP1.33□□□□□ -2.2
GTF3A-208ENST00000493903 GVQW2A0A096LPI5 108 aaPredicted RBP1.33□□□□□ -2.2
GTF3A-208ENST00000493903 F2Z2F3 143 aa1.33□□□□□ -2.2
GTF3A-208ENST00000493903 H3BVH4 76 aa1.33□□□□□ -2.2
GTF3A-208ENST00000493903 PPP1R17O96001 155 aa1.33□□□□□ -2.2
GTF3A-208ENST00000493903 FAUP35544 74 aaKnown RBP1.33□□□□□ -2.2
GTF3A-208ENST00000493903 S100A10P60903 97 aa1.33□□□□□ -2.2
GTF3A-208ENST00000493903 KRTAP19-2Q3LHN2 52 aa1.33□□□□□ -2.2
GTF3A-208ENST00000493903 C9orf62Q8N4C0 152 aa1.33□□□□□ -2.2
GTF3A-208ENST00000493903 Q9H521 79 aa1.33□□□□□ -2.2
GTF3A-208ENST00000493903 V9GYH0 126 aa1.33□□□□□ -2.2
GTF3A-208ENST00000493903 A0A087WXM4 84 aa1.32□□□□□ -2.2
GTF3A-208ENST00000493903 TRBV6-1A0A0K0K1D8 114 aa1.32□□□□□ -2.2
GTF3A-208ENST00000493903 MPC2O95563 127 aa1.32□□□□□ -2.2
GTF3A-208ENST00000493903 ARMS2P0C7Q2 107 aa1.32□□□□□ -2.2
GTF3A-208ENST00000493903 CRIP1P50238 77 aa1.32□□□□□ -2.2
GTF3A-208ENST00000493903 MT1HP80294 61 aa1.32□□□□□ -2.2
GTF3A-208ENST00000493903 Q5VV11 94 aa1.32□□□□□ -2.2
GTF3A-208ENST00000493903 BAGE3Q86Y29 109 aa1.32□□□□□ -2.2
GTF3A-208ENST00000493903 TOMM5Q8N4H5 51 aa1.32□□□□□ -2.2
GTF3A-208ENST00000493903 NMES1Q9C002 83 aa1.32□□□□□ -2.2
GTF3A-208ENST00000493903 TRBV25-1A0A075B6N4 114 aa1.31□□□□□ -2.2
GTF3A-208ENST00000493903 NAP1L6A6NFF2 107 aa1.31□□□□□ -2.2
GTF3A-208ENST00000493903 ACYP2P14621 99 aa1.31□□□□□ -2.2
GTF3A-208ENST00000493903 SMIM11BQ8TCY0 68 aa1.31□□□□□ -2.2
GTF3A-208ENST00000493903 ARL2-SNX15V9GYD0 113 aa1.31□□□□□ -2.2
GTF3A-208ENST00000493903 M0QY20 66 aa1.3□□□□□ -2.2
GTF3A-208ENST00000493903 KRTDAPP60985 99 aa1.3□□□□□ -2.2
GTF3A-208ENST00000493903 SPAG11BQ08648 103 aa1.3□□□□□ -2.2
GTF3A-208ENST00000493903 SPAG11AQ6PDA7 123 aa1.3□□□□□ -2.2
GTF3A-208ENST00000493903 GCHFRP30047 84 aa1.29□□□□□ -2.2
GTF3A-208ENST00000493903 PYY3Q5JQD4 70 aa1.29□□□□□ -2.2
GTF3A-208ENST00000493903 GPR98Q8WXG9 6306 aa1.29□□□□□ -2.2
GTF3A-208ENST00000493903 LINC00959A0A1B0GUT2 108 aa1.28□□□□□ -2.2
GTF3A-208ENST00000493903 COL5A1-AS1Q5SY13 56 aa1.28□□□□□ -2.2
GTF3A-208ENST00000493903 PRO1933Q9H354 126 aa1.28□□□□□ -2.2
GTF3A-208ENST00000493903 TMEM167BQ9NRX6 74 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms