RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 USH2AO75445 5202 aa11.84□□□□□ -0.51
RHBDD3-206ENST00000493894 C21orf62-AS1Q17RA5 79 aa11.82□□□□□ -0.52
RHBDD3-206ENST00000493894 J3KT08 172 aa11.8□□□□□ -0.52
RHBDD3-206ENST00000493894 TMA7Q9Y2S6 64 aaKnown RBP11.8□□□□□ -0.52
RHBDD3-206ENST00000493894 C9JAW5 83 aa11.79□□□□□ -0.52
RHBDD3-206ENST00000493894 MT2AP02795 61 aa11.78□□□□□ -0.52
RHBDD3-206ENST00000493894 BAALC-AS2P0C853 105 aa11.78□□□□□ -0.52
RHBDD3-206ENST00000493894 ZCCHC13Q8WW36 166 aaKnown RBP11.75□□□□□ -0.53
RHBDD3-206ENST00000493894 SSPOA2VEC9 5147 aa11.75□□□□□ -0.53
RHBDD3-206ENST00000493894 Q6ZQT0 140 aa11.74□□□□□ -0.53
RHBDD3-206ENST00000493894 MTURNQ8N3F0 131 aa11.73□□□□□ -0.53
RHBDD3-206ENST00000493894 NDUFB1O75438 58 aa11.71□□□□□ -0.53
RHBDD3-206ENST00000493894 MT1FP04733 61 aa11.68□□□□□ -0.54
RHBDD3-206ENST00000493894 ATXN8Q156A1 80 aa11.68□□□□□ -0.54
RHBDD3-206ENST00000493894 JMJD7-PLA2G4BH0Y9G9 81 aa11.67□□□□□ -0.54
RHBDD3-206ENST00000493894 SPINK7P58062 85 aa11.67□□□□□ -0.54
RHBDD3-206ENST00000493894 M0R143 59 aa11.65□□□□□ -0.54
RHBDD3-206ENST00000493894 Q8N9P0 234 aaPredicted RBP11.65□□□□□ -0.54
RHBDD3-206ENST00000493894 LOC110117498A0A087WWA1 95 aa11.63□□□□□ -0.55
RHBDD3-206ENST00000493894 A0A1B0GW54 56 aa11.63□□□□□ -0.55
RHBDD3-206ENST00000493894 KRTAP10-10P60014 251 aa11.63□□□□□ -0.55
RHBDD3-206ENST00000493894 NAA38Q9BRA0 125 aaKnown RBP11.63□□□□□ -0.55
RHBDD3-206ENST00000493894 A8MWP4 228 aa11.62□□□□□ -0.55
RHBDD3-206ENST00000493894 C8orf17Q9NRJ1 99 aa11.62□□□□□ -0.55
RHBDD3-206ENST00000493894 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.61□□□□□ -0.55
RHBDD3-206ENST00000493894 PDE6GP18545 87 aa11.6□□□□□ -0.55
RHBDD3-206ENST00000493894 LYRM7Q5U5X0 104 aa11.59□□□□□ -0.55
RHBDD3-206ENST00000493894 LCE2BO14633 110 aa11.57□□□□□ -0.56
RHBDD3-206ENST00000493894 KRTAP9-3Q9BYQ3 159 aa11.57□□□□□ -0.56
RHBDD3-206ENST00000493894 IGKV3D-7A0A0C4DH55 119 aa11.56□□□□□ -0.56
RHBDD3-206ENST00000493894 C14orf132Q9NPU4 83 aa11.55□□□□□ -0.56
RHBDD3-206ENST00000493894 WFDC13Q8IUB5 93 aa11.54□□□□□ -0.56
RHBDD3-206ENST00000493894 KRTAP9-7A8MTY7 169 aa11.53□□□□□ -0.56
RHBDD3-206ENST00000493894 Q6ZVQ6 151 aa11.53□□□□□ -0.56
RHBDD3-206ENST00000493894 FCGBPQ9Y6R7 5405 aaPredicted RBP11.52□□□□□ -0.56
RHBDD3-206ENST00000493894 PRR15Q8IV56 129 aa11.49□□□□□ -0.57
RHBDD3-206ENST00000493894 NREPQ16612 68 aa11.48□□□□□ -0.57
RHBDD3-206ENST00000493894 KRTAP19-1Q8IUB9 90 aa11.47□□□□□ -0.57
RHBDD3-206ENST00000493894 TMEM254Q8TBM7 123 aa11.43□□□□□ -0.58
RHBDD3-206ENST00000493894 MMP24-AS1A0A0U1RRL7 71 aa11.42□□□□□ -0.58
RHBDD3-206ENST00000493894 SMIM6P0DI80 62 aa11.42□□□□□ -0.58
RHBDD3-206ENST00000493894 MRPL34Q9BQ48 92 aaKnown RBP11.42□□□□□ -0.58
RHBDD3-206ENST00000493894 BATFQ16520 125 aa11.37□□□□□ -0.59
RHBDD3-206ENST00000493894 K7EQZ3 153 aa11.35□□□□□ -0.59
RHBDD3-206ENST00000493894 hDV103S1A0JD37 113 aa11.34□□□□□ -0.59
RHBDD3-206ENST00000493894 NDUFS5O43920 106 aa11.34□□□□□ -0.59
RHBDD3-206ENST00000493894 TSTD3H0UI37 97 aa11.33□□□□□ -0.6
RHBDD3-206ENST00000493894 H3BT86 120 aa11.32□□□□□ -0.6
RHBDD3-206ENST00000493894 LINC00846Q9NV44 126 aa11.28□□□□□ -0.6
RHBDD3-206ENST00000493894 MACF1Q9UPN3 7388 aaKnown RBP11.28□□□□□ -0.6
RHBDD3-206ENST00000493894 H1FX-AS1Q4G0G2 97 aa11.27□□□□□ -0.61
RHBDD3-206ENST00000493894 BPY2O14599 106 aa11.26□□□□□ -0.61
RHBDD3-206ENST00000493894 C9orf118A6NHY6 69 aa11.25□□□□□ -0.61
RHBDD3-206ENST00000493894 IGKV2D-30A0A075B6S6 120 aa11.23□□□□□ -0.61
RHBDD3-206ENST00000493894 IGKV2-30P06310 120 aa11.23□□□□□ -0.61
RHBDD3-206ENST00000493894 A0A1W2PPM0 123 aa11.22□□□□□ -0.61
RHBDD3-206ENST00000493894 KRTAP19-6Q3LI70 58 aa11.22□□□□□ -0.61
RHBDD3-206ENST00000493894 C7orf65Q6ZTY9 151 aa11.22□□□□□ -0.61
RHBDD3-206ENST00000493894 TAX1BP3O14907 124 aa11.19□□□□□ -0.62
RHBDD3-206ENST00000493894 SYNE2Q8WXH0 6885 aaKnown RBP11.17□□□□□ -0.62
RHBDD3-206ENST00000493894 Q5W150 140 aa11.16□□□□□ -0.62
RHBDD3-206ENST00000493894 CASC2Q6XLA1 102 aa11.15□□□□□ -0.62
RHBDD3-206ENST00000493894 Q8N9L7 120 aa11.14□□□□□ -0.63
RHBDD3-206ENST00000493894 HCG22E2RYF7 251 aa11.11□□□□□ -0.63
RHBDD3-206ENST00000493894 SPCS1Q9Y6A9 102 aa11.06□□□□□ -0.64
RHBDD3-206ENST00000493894 CXCL6P80162 114 aa11.05□□□□□ -0.64
RHBDD3-206ENST00000493894 C4orf26Q17RF5 130 aa11.03□□□□□ -0.64
RHBDD3-206ENST00000493894 SMCPP49901 116 aaPredicted RBP10.98□□□□□ -0.65
RHBDD3-206ENST00000493894 UBL5Q9BZL1 73 aa10.98□□□□□ -0.65
RHBDD3-206ENST00000493894 LOC105371267A0A1B0GV96 52 aa10.96□□□□□ -0.65
RHBDD3-206ENST00000493894 C5orf47Q569G3 176 aa10.9□□□□□ -0.66
RHBDD3-206ENST00000493894 PRO0461Q9UI25 63 aa10.87□□□□□ -0.67
RHBDD3-206ENST00000493894 FAM236AA0A1B0GUQ0 79 aa10.86□□□□□ -0.67
RHBDD3-206ENST00000493894 FAM236BA0A1B0GV22 79 aa10.86□□□□□ -0.67
RHBDD3-206ENST00000493894 S4R3F8 94 aa10.86□□□□□ -0.67
RHBDD3-206ENST00000493894 COL5A1-AS1Q5SY13 56 aa10.84□□□□□ -0.67
RHBDD3-206ENST00000493894 K7EP34 96 aa10.83□□□□□ -0.68
RHBDD3-206ENST00000493894 KRTAP3-1Q9BYR8 98 aa10.82□□□□□ -0.68
RHBDD3-206ENST00000493894 C1orf64Q8NEQ6 169 aa10.81□□□□□ -0.68
RHBDD3-206ENST00000493894 KRTAP6-3Q3LI67 103 aa10.78□□□□□ -0.68
RHBDD3-206ENST00000493894 CSAG1Q6PB30 78 aa10.78□□□□□ -0.68
RHBDD3-206ENST00000493894 TP53AIP1Q9HCN2 124 aa10.78□□□□□ -0.68
RHBDD3-206ENST00000493894 LCA10Q71F78 164 aa10.75□□□□□ -0.69
RHBDD3-206ENST00000493894 Q5VV11 94 aa10.69□□□□□ -0.7
RHBDD3-206ENST00000493894 A6NN06 94 aa10.66□□□□□ -0.7
RHBDD3-206ENST00000493894 MT1BP07438 61 aa10.66□□□□□ -0.7
RHBDD3-206ENST00000493894 GTF2H5Q6ZYL4 71 aa10.66□□□□□ -0.7
RHBDD3-206ENST00000493894 SPRR2GQ9BYE4 73 aa10.66□□□□□ -0.7
RHBDD3-206ENST00000493894 KRTAP19-8Q3LI54 63 aa10.62□□□□□ -0.71
RHBDD3-206ENST00000493894 F8W1H4 67 aa10.61□□□□□ -0.71
RHBDD3-206ENST00000493894 ETDBQ3ZM63 59 aa10.6□□□□□ -0.71
RHBDD3-206ENST00000493894 KLKP1Q107X0 134 aa10.59□□□□□ -0.71
RHBDD3-206ENST00000493894 CYP4F30PQ9H0H9 118 aa10.57□□□□□ -0.72
RHBDD3-206ENST00000493894 TRAV22A0A0B4J277 110 aa10.54□□□□□ -0.72
RHBDD3-206ENST00000493894 KRTAP3-3Q9BYR6 98 aa10.54□□□□□ -0.72
RHBDD3-206ENST00000493894 NEBP20929 6669 aa10.54□□□□□ -0.72
RHBDD3-206ENST00000493894 LOC101927531A0A1B0GV80 90 aa10.51□□□□□ -0.73
RHBDD3-206ENST00000493894 KRTAP10-5P60370 271 aa10.47□□□□□ -0.73
RHBDD3-206ENST00000493894 A0A087WVE0 104 aa10.45□□□□□ -0.74
RHBDD3-206ENST00000493894 CRIPTQ9P021 101 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms