RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 Q6ZQT0 140 aa7.15□□□□□ -1.26
SNX17-208ENST00000493711 A0A0G2JQZ4 141 aa7.14□□□□□ -1.27
SNX17-208ENST00000493711 A0A1W2PNM2 257 aa7.14□□□□□ -1.27
SNX17-208ENST00000493711 FAT3Q8TDW7 4589 aa7.14□□□□□ -1.27
SNX17-208ENST00000493711 ETDBQ3ZM63 59 aa7.12□□□□□ -1.27
SNX17-208ENST00000493711 VPS25Q9BRG1 176 aa7.12□□□□□ -1.27
SNX17-208ENST00000493711 ASB16-AS1Q495Z4 193 aa7.11□□□□□ -1.27
SNX17-208ENST00000493711 A0A087WSZ3 146 aa7.1□□□□□ -1.27
SNX17-208ENST00000493711 KRTAP3-1Q9BYR8 98 aa7.1□□□□□ -1.27
SNX17-208ENST00000493711 FP248Q71RG6 208 aaPredicted RBP7.08□□□□□ -1.28
SNX17-208ENST00000493711 TNXBP22105 4242 aa7.08□□□□□ -1.28
SNX17-208ENST00000493711 LRP2P98164 4655 aa7.07□□□□□ -1.28
SNX17-208ENST00000493711 C1orf195Q5TG92 126 aa7.04□□□□□ -1.28
SNX17-208ENST00000493711 ACYP1P07311 99 aa7.02□□□□□ -1.29
SNX17-208ENST00000493711 NREPQ16612 68 aa7.02□□□□□ -1.29
SNX17-208ENST00000493711 J3KT08 172 aa7.01□□□□□ -1.29
SNX17-208ENST00000493711 J3QR89 54 aa7.01□□□□□ -1.29
SNX17-208ENST00000493711 PRR4Q16378 134 aa7.01□□□□□ -1.29
SNX17-208ENST00000493711 RETNLBQ9BQ08 111 aa7.01□□□□□ -1.29
SNX17-208ENST00000493711 IGLV7-46A0A075B6I9 117 aa7□□□□□ -1.29
SNX17-208ENST00000493711 FAM240AA0A1B0GVK7 77 aa6.99□□□□□ -1.29
SNX17-208ENST00000493711 UBL5Q9BZL1 73 aa6.99□□□□□ -1.29
SNX17-208ENST00000493711 LINC00472Q9H8W2 130 aa6.99□□□□□ -1.29
SNX17-208ENST00000493711 Q96NJ1 140 aa6.97□□□□□ -1.29
SNX17-208ENST00000493711 IGKV4-1P06312 121 aa6.96□□□□□ -1.3
SNX17-208ENST00000493711 Q6ZVQ6 151 aa6.95□□□□□ -1.3
SNX17-208ENST00000493711 SIGMAR1Q99720 223 aa6.95□□□□□ -1.3
SNX17-208ENST00000493711 LINC00846Q9NV44 126 aa6.95□□□□□ -1.3
SNX17-208ENST00000493711 TPRXLQ17RH7 258 aa6.94□□□□□ -1.3
SNX17-208ENST00000493711 NDUFB1O75438 58 aa6.93□□□□□ -1.3
SNX17-208ENST00000493711 BPY2O14599 106 aa6.92□□□□□ -1.3
SNX17-208ENST00000493711 DEFB116Q30KQ4 102 aa6.91□□□□□ -1.3
SNX17-208ENST00000493711 A8MWP4 228 aa6.9□□□□□ -1.3
SNX17-208ENST00000493711 K7ERU9 68 aa6.9□□□□□ -1.3
SNX17-208ENST00000493711 KRTAP13-3Q3SY46 172 aa6.89□□□□□ -1.31
SNX17-208ENST00000493711 A0A1B0GVX0 72 aa6.88□□□□□ -1.31
SNX17-208ENST00000493711 C8orf87E5RJ46 101 aa6.87□□□□□ -1.31
SNX17-208ENST00000493711 CXCL6P80162 114 aa6.87□□□□□ -1.31
SNX17-208ENST00000493711 ATP5EP2Q5VTU8 51 aa6.87□□□□□ -1.31
SNX17-208ENST00000493711 IGHV6-1A0A0B4J1U7 121 aa6.85□□□□□ -1.31
SNX17-208ENST00000493711 LINC00313P59037 77 aa6.85□□□□□ -1.31
SNX17-208ENST00000493711 PRR15Q8IV56 129 aa6.85□□□□□ -1.31
SNX17-208ENST00000493711 DSCR10P59022 87 aa6.84□□□□□ -1.31
SNX17-208ENST00000493711 LINC00643Q86TS7 51 aa6.84□□□□□ -1.31
SNX17-208ENST00000493711 IGKV3D-7A0A0C4DH55 119 aa6.83□□□□□ -1.32
SNX17-208ENST00000493711 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
SNX17-208ENST00000493711 K7EQZ3 153 aa6.8□□□□□ -1.32
SNX17-208ENST00000493711 C8orf17Q9NRJ1 99 aa6.79□□□□□ -1.32
SNX17-208ENST00000493711 Q75L30 129 aa6.75□□□□□ -1.33
SNX17-208ENST00000493711 Q8N9L7 120 aa6.75□□□□□ -1.33
SNX17-208ENST00000493711 TMEM254Q8TBM7 123 aa6.75□□□□□ -1.33
SNX17-208ENST00000493711 MMP24-AS1A0A0U1RRL7 71 aa6.74□□□□□ -1.33
SNX17-208ENST00000493711 hDV103S1A0JD37 113 aa6.74□□□□□ -1.33
SNX17-208ENST00000493711 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
SNX17-208ENST00000493711 NOTCH2NLQ7Z3S9 236 aa6.74□□□□□ -1.33
SNX17-208ENST00000493711 C20orf166-AS1Q96NR2 134 aa6.74□□□□□ -1.33
SNX17-208ENST00000493711 MUC2Q02817 5179 aa6.74□□□□□ -1.33
SNX17-208ENST00000493711 A8MUU9 505 aa6.73□□□□□ -1.33
SNX17-208ENST00000493711 KRTAP16-1A8MUX0 517 aa6.73□□□□□ -1.33
SNX17-208ENST00000493711 HCG22E2RYF7 251 aa6.73□□□□□ -1.33
SNX17-208ENST00000493711 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
SNX17-208ENST00000493711 CASC2Q6XLA1 102 aa6.73□□□□□ -1.33
SNX17-208ENST00000493711 HIST1H4AP62805 103 aaKnown RBP6.71□□□□□ -1.34
SNX17-208ENST00000493711 MRPL34Q9BQ48 92 aaKnown RBP6.71□□□□□ -1.34
SNX17-208ENST00000493711 FAT4Q6V0I7 4981 aa6.71□□□□□ -1.34
SNX17-208ENST00000493711 LPAP08519 4548 aa6.7□□□□□ -1.34
SNX17-208ENST00000493711 ATP11AUNQ6ZP68 121 aa6.7□□□□□ -1.34
SNX17-208ENST00000493711 Q8N9P0 234 aaPredicted RBP6.7□□□□□ -1.34
SNX17-208ENST00000493711 IMUPQ9GZP8 106 aa6.69□□□□□ -1.34
SNX17-208ENST00000493711 WFDC13Q8IUB5 93 aa6.68□□□□□ -1.34
SNX17-208ENST00000493711 NDUFS5O43920 106 aa6.64□□□□□ -1.35
SNX17-208ENST00000493711 PCOTHQ58A44 107 aa6.63□□□□□ -1.35
SNX17-208ENST00000493711 TP53AIP1Q9HCN2 124 aa6.63□□□□□ -1.35
SNX17-208ENST00000493711 MT-ATP8P03928 68 aa6.62□□□□□ -1.35
SNX17-208ENST00000493711 ZCCHC13Q8WW36 166 aaKnown RBP6.61□□□□□ -1.35
SNX17-208ENST00000493711 A0A087WVE0 104 aa6.6□□□□□ -1.35
SNX17-208ENST00000493711 A0A0U1RQV1 116 aa6.59□□□□□ -1.35
SNX17-208ENST00000493711 SCGB1A1P11684 91 aa6.56□□□□□ -1.36
SNX17-208ENST00000493711 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
SNX17-208ENST00000493711 UQCRQO14949 82 aa6.54□□□□□ -1.36
SNX17-208ENST00000493711 KRTAP5-3Q6L8H2 238 aa6.52□□□□□ -1.37
SNX17-208ENST00000493711 SMIM20Q8N5G0 67 aa6.52□□□□□ -1.37
SNX17-208ENST00000493711 FAM236AA0A1B0GUQ0 79 aa6.49□□□□□ -1.37
SNX17-208ENST00000493711 FAM236BA0A1B0GV22 79 aa6.49□□□□□ -1.37
SNX17-208ENST00000493711 ATOX1O00244 68 aa6.49□□□□□ -1.37
SNX17-208ENST00000493711 TRAV22A0A0B4J277 110 aa6.48□□□□□ -1.37
SNX17-208ENST00000493711 Q5W150 140 aa6.48□□□□□ -1.37
SNX17-208ENST00000493711 OCR1Q9BZK8 76 aa6.48□□□□□ -1.37
SNX17-208ENST00000493711 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
SNX17-208ENST00000493711 FSIP2Q5CZC0 6907 aa6.47□□□□□ -1.37
SNX17-208ENST00000493711 SPINK7P58062 85 aa6.46□□□□□ -1.38
SNX17-208ENST00000493711 C5orf47Q569G3 176 aa6.46□□□□□ -1.38
SNX17-208ENST00000493711 C7orf65Q6ZTY9 151 aa6.45□□□□□ -1.38
SNX17-208ENST00000493711 KRTAP4-1Q9BYQ7 146 aa6.45□□□□□ -1.38
SNX17-208ENST00000493711 MP68P56378 58 aa6.44□□□□□ -1.38
SNX17-208ENST00000493711 KRTAP15-1Q3LI76 137 aa6.44□□□□□ -1.38
SNX17-208ENST00000493711 TRAV7A0A075B6U4 112 aa6.43□□□□□ -1.38
SNX17-208ENST00000493711 LOC101927531A0A1B0GV80 90 aa6.43□□□□□ -1.38
SNX17-208ENST00000493711 H0Y9P7 68 aa6.43□□□□□ -1.38
SNX17-208ENST00000493711 IGKV2D-30A0A075B6S6 120 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms