RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 RBM3P98179 157 aaKnown RBP11□□□□□ -0.65
LYSMD4-208ENST00000493256 SCGB1C2P0DMR2 95 aa10.98□□□□□ -0.65
LYSMD4-208ENST00000493256 DSCR8Q96T75 97 aa10.98□□□□□ -0.65
LYSMD4-208ENST00000493256 MT1FP04733 61 aa10.97□□□□□ -0.65
LYSMD4-208ENST00000493256 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.94□□□□□ -0.66
LYSMD4-208ENST00000493256 BAALC-AS2P0C853 105 aa10.92□□□□□ -0.66
LYSMD4-208ENST00000493256 ZCCHC13Q8WW36 166 aaKnown RBP10.92□□□□□ -0.66
LYSMD4-208ENST00000493256 C9JAW5 83 aa10.91□□□□□ -0.66
LYSMD4-208ENST00000493256 J3KT08 172 aa10.91□□□□□ -0.66
LYSMD4-208ENST00000493256 LCE2BO14633 110 aa10.9□□□□□ -0.66
LYSMD4-208ENST00000493256 FCGBPQ9Y6R7 5405 aaPredicted RBP10.9□□□□□ -0.66
LYSMD4-208ENST00000493256 KRTAP10-10P60014 251 aa10.89□□□□□ -0.67
LYSMD4-208ENST00000493256 C21orf62-AS1Q17RA5 79 aa10.89□□□□□ -0.67
LYSMD4-208ENST00000493256 Q6ZQT0 140 aa10.89□□□□□ -0.67
LYSMD4-208ENST00000493256 KRTAP9-3Q9BYQ3 159 aa10.89□□□□□ -0.67
LYSMD4-208ENST00000493256 KRTAP9-7A8MTY7 169 aa10.86□□□□□ -0.67
LYSMD4-208ENST00000493256 SPINK7P58062 85 aa10.86□□□□□ -0.67
LYSMD4-208ENST00000493256 TMA7Q9Y2S6 64 aaKnown RBP10.86□□□□□ -0.67
LYSMD4-208ENST00000493256 MTURNQ8N3F0 131 aa10.85□□□□□ -0.67
LYSMD4-208ENST00000493256 Q8N9P0 234 aaPredicted RBP10.83□□□□□ -0.68
LYSMD4-208ENST00000493256 NDUFB1O75438 58 aa10.82□□□□□ -0.68
LYSMD4-208ENST00000493256 KRTAP19-1Q8IUB9 90 aa10.79□□□□□ -0.68
LYSMD4-208ENST00000493256 C8orf17Q9NRJ1 99 aa10.79□□□□□ -0.68
LYSMD4-208ENST00000493256 NAA38Q9BRA0 125 aaKnown RBP10.78□□□□□ -0.68
LYSMD4-208ENST00000493256 LOC110117498A0A087WWA1 95 aa10.77□□□□□ -0.69
LYSMD4-208ENST00000493256 A8MWP4 228 aa10.77□□□□□ -0.69
LYSMD4-208ENST00000493256 ATXN8Q156A1 80 aa10.77□□□□□ -0.69
LYSMD4-208ENST00000493256 JMJD7-PLA2G4BH0Y9G9 81 aa10.76□□□□□ -0.69
LYSMD4-208ENST00000493256 IGKV3D-7A0A0C4DH55 119 aa10.75□□□□□ -0.69
LYSMD4-208ENST00000493256 A0A1B0GW54 56 aa10.74□□□□□ -0.69
LYSMD4-208ENST00000493256 LYRM7Q5U5X0 104 aa10.73□□□□□ -0.69
LYSMD4-208ENST00000493256 WFDC13Q8IUB5 93 aa10.73□□□□□ -0.69
LYSMD4-208ENST00000493256 M0R143 59 aa10.71□□□□□ -0.69
LYSMD4-208ENST00000493256 PDE6GP18545 87 aa10.7□□□□□ -0.7
LYSMD4-208ENST00000493256 Q6ZVQ6 151 aa10.7□□□□□ -0.7
LYSMD4-208ENST00000493256 C14orf132Q9NPU4 83 aa10.69□□□□□ -0.7
LYSMD4-208ENST00000493256 PRR15Q8IV56 129 aa10.66□□□□□ -0.7
LYSMD4-208ENST00000493256 NREPQ16612 68 aa10.62□□□□□ -0.71
LYSMD4-208ENST00000493256 MMP24-AS1A0A0U1RRL7 71 aa10.61□□□□□ -0.71
LYSMD4-208ENST00000493256 TMEM254Q8TBM7 123 aa10.58□□□□□ -0.72
LYSMD4-208ENST00000493256 MRPL34Q9BQ48 92 aaKnown RBP10.58□□□□□ -0.72
LYSMD4-208ENST00000493256 MACF1Q9UPN3 7388 aaKnown RBP10.56□□□□□ -0.72
LYSMD4-208ENST00000493256 KRTAP19-6Q3LI70 58 aa10.53□□□□□ -0.72
LYSMD4-208ENST00000493256 hDV103S1A0JD37 113 aa10.52□□□□□ -0.73
LYSMD4-208ENST00000493256 K7EQZ3 153 aa10.52□□□□□ -0.73
LYSMD4-208ENST00000493256 H1FX-AS1Q4G0G2 97 aa10.5□□□□□ -0.73
LYSMD4-208ENST00000493256 NDUFS5O43920 106 aa10.49□□□□□ -0.73
LYSMD4-208ENST00000493256 LINC00846Q9NV44 126 aa10.49□□□□□ -0.73
LYSMD4-208ENST00000493256 SMIM6P0DI80 62 aa10.48□□□□□ -0.73
LYSMD4-208ENST00000493256 SYNE2Q8WXH0 6885 aaKnown RBP10.48□□□□□ -0.73
LYSMD4-208ENST00000493256 BATFQ16520 125 aa10.47□□□□□ -0.73
LYSMD4-208ENST00000493256 H3BT86 120 aa10.43□□□□□ -0.74
LYSMD4-208ENST00000493256 IGKV2D-30A0A075B6S6 120 aa10.42□□□□□ -0.74
LYSMD4-208ENST00000493256 IGKV2-30P06310 120 aa10.42□□□□□ -0.74
LYSMD4-208ENST00000493256 BPY2O14599 106 aa10.41□□□□□ -0.74
LYSMD4-208ENST00000493256 Q5W150 140 aa10.41□□□□□ -0.74
LYSMD4-208ENST00000493256 C7orf65Q6ZTY9 151 aa10.39□□□□□ -0.75
LYSMD4-208ENST00000493256 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
LYSMD4-208ENST00000493256 TSTD3H0UI37 97 aa10.38□□□□□ -0.75
LYSMD4-208ENST00000493256 A0A1W2PPM0 123 aa10.35□□□□□ -0.75
LYSMD4-208ENST00000493256 Q8N9L7 120 aa10.35□□□□□ -0.75
LYSMD4-208ENST00000493256 TAX1BP3O14907 124 aa10.34□□□□□ -0.75
LYSMD4-208ENST00000493256 CASC2Q6XLA1 102 aa10.31□□□□□ -0.76
LYSMD4-208ENST00000493256 HCG22E2RYF7 251 aa10.3□□□□□ -0.76
LYSMD4-208ENST00000493256 C4orf26Q17RF5 130 aa10.27□□□□□ -0.77
LYSMD4-208ENST00000493256 CXCL6P80162 114 aa10.22□□□□□ -0.77
LYSMD4-208ENST00000493256 SMCPP49901 116 aaPredicted RBP10.18□□□□□ -0.78
LYSMD4-208ENST00000493256 SPCS1Q9Y6A9 102 aa10.18□□□□□ -0.78
LYSMD4-208ENST00000493256 C5orf47Q569G3 176 aa10.16□□□□□ -0.78
LYSMD4-208ENST00000493256 KRTAP6-3Q3LI67 103 aa10.15□□□□□ -0.78
LYSMD4-208ENST00000493256 KRTAP3-1Q9BYR8 98 aa10.13□□□□□ -0.79
LYSMD4-208ENST00000493256 LOC105371267A0A1B0GV96 52 aa10.11□□□□□ -0.79
LYSMD4-208ENST00000493256 UBL5Q9BZL1 73 aa10.11□□□□□ -0.79
LYSMD4-208ENST00000493256 FAM236AA0A1B0GUQ0 79 aa10.08□□□□□ -0.8
LYSMD4-208ENST00000493256 FAM236BA0A1B0GV22 79 aa10.08□□□□□ -0.8
LYSMD4-208ENST00000493256 S4R3F8 94 aa10.07□□□□□ -0.8
LYSMD4-208ENST00000493256 PRO0461Q9UI25 63 aa10.06□□□□□ -0.8
LYSMD4-208ENST00000493256 C1orf64Q8NEQ6 169 aa10.04□□□□□ -0.8
LYSMD4-208ENST00000493256 MT1BP07438 61 aa10.01□□□□□ -0.81
LYSMD4-208ENST00000493256 CSAG1Q6PB30 78 aa10.01□□□□□ -0.81
LYSMD4-208ENST00000493256 LCA10Q71F78 164 aa10.01□□□□□ -0.81
LYSMD4-208ENST00000493256 K7EP34 96 aa9.97□□□□□ -0.81
LYSMD4-208ENST00000493256 A6NN06 94 aa9.96□□□□□ -0.82
LYSMD4-208ENST00000493256 COL5A1-AS1Q5SY13 56 aa9.96□□□□□ -0.82
LYSMD4-208ENST00000493256 Q5VV11 94 aa9.96□□□□□ -0.82
LYSMD4-208ENST00000493256 SPRR2GQ9BYE4 73 aa9.96□□□□□ -0.82
LYSMD4-208ENST00000493256 TP53AIP1Q9HCN2 124 aa9.95□□□□□ -0.82
LYSMD4-208ENST00000493256 KRTAP19-8Q3LI54 63 aa9.94□□□□□ -0.82
LYSMD4-208ENST00000493256 NEBP20929 6669 aa9.89□□□□□ -0.83
LYSMD4-208ENST00000493256 KLKP1Q107X0 134 aa9.86□□□□□ -0.83
LYSMD4-208ENST00000493256 KRTAP3-3Q9BYR6 98 aa9.86□□□□□ -0.83
LYSMD4-208ENST00000493256 MUC12Q9UKN1 5478 aa9.82□□□□□ -0.84
LYSMD4-208ENST00000493256 KRTAP10-5P60370 271 aa9.82□□□□□ -0.84
LYSMD4-208ENST00000493256 CYP4F30PQ9H0H9 118 aa9.81□□□□□ -0.84
LYSMD4-208ENST00000493256 ETDBQ3ZM63 59 aa9.78□□□□□ -0.84
LYSMD4-208ENST00000493256 GTF2H5Q6ZYL4 71 aa9.78□□□□□ -0.84
LYSMD4-208ENST00000493256 A0A087WVE0 104 aa9.77□□□□□ -0.85
LYSMD4-208ENST00000493256 F8W1H4 67 aa9.76□□□□□ -0.85
LYSMD4-208ENST00000493256 TRAV22A0A0B4J277 110 aa9.73□□□□□ -0.85
LYSMD4-208ENST00000493256 LOC101927531A0A1B0GV80 90 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms