RNA–Protein interactions for RNA: ENST00000492622.6

FNDC3A-204, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,286 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-204ENST00000492622 NIPBLQ6KC79 2804 aaeCLIP5.16□□□□□ -1.58
FNDC3A-204ENST00000492622 CELSR1Q9NYQ6 3014 aa5.15□□□□□ -1.59
FNDC3A-204ENST00000492622 KRTAP10-1P60331 282 aa5.15□□□□□ -1.59
FNDC3A-204ENST00000492622 KRTAP4-16G5E9R7 235 aaPredicted RBP5.14□□□□□ -1.59
FNDC3A-204ENST00000492622 LINC01558Q9Y6Z2 57 aa5.14□□□□□ -1.59
FNDC3A-204ENST00000492622 SVEP1Q4LDE5 3571 aa5.14□□□□□ -1.59
FNDC3A-204ENST00000492622 SPRR1BP22528 89 aa5.13□□□□□ -1.59
FNDC3A-204ENST00000492622 ZCCHC13Q8WW36 166 aaKnown RBP5.13□□□□□ -1.59
FNDC3A-204ENST00000492622 TENM4Q6N022 2769 aa5.12□□□□□ -1.59
FNDC3A-204ENST00000492622 CSAG1Q6PB30 78 aa5.11□□□□□ -1.59
FNDC3A-204ENST00000492622 Q6ZSA8 131 aa5.11□□□□□ -1.59
FNDC3A-204ENST00000492622 KRTAP7-1Q8IUC3 87 aa5.11□□□□□ -1.59
FNDC3A-204ENST00000492622 A8MU10 97 aa5.07□□□□□ -1.6
FNDC3A-204ENST00000492622 KRTAP29-1A8MX34 341 aaPredicted RBP5.07□□□□□ -1.6
FNDC3A-204ENST00000492622 MXRA5Q9NR99 2828 aa5.05□□□□□ -1.6
FNDC3A-204ENST00000492622 SPATA8Q6RVD6 105 aa5.05□□□□□ -1.6
FNDC3A-204ENST00000492622 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
FNDC3A-204ENST00000492622 S4R3F8 94 aa5.02□□□□□ -1.61
FNDC3A-204ENST00000492622 LINC00483Q53H64 154 aa5.01□□□□□ -1.61
FNDC3A-204ENST00000492622 Q5VSD8 79 aa4.99□□□□□ -1.61
FNDC3A-204ENST00000492622 Q6ZR54 194 aa4.99□□□□□ -1.61
FNDC3A-204ENST00000492622 DMAC1Q96GE9 116 aa4.99□□□□□ -1.61
FNDC3A-204ENST00000492622 M0R2T5 61 aa4.99□□□□□ -1.61
FNDC3A-204ENST00000492622 H3BS24 57 aa4.98□□□□□ -1.61
FNDC3A-204ENST00000492622 PKD1L1Q8TDX9 2849 aa4.96□□□□□ -1.61
FNDC3A-204ENST00000492622 ADM2Q7Z4H4 148 aa4.96□□□□□ -1.62
FNDC3A-204ENST00000492622 Q6ZRN7 208 aaPredicted RBP4.95□□□□□ -1.62
FNDC3A-204ENST00000492622 R4GN34 69 aa4.94□□□□□ -1.62
FNDC3A-204ENST00000492622 TENM1Q9UKZ4 2725 aa4.94□□□□□ -1.62
FNDC3A-204ENST00000492622 NBPF19A0A087WUL8 3843 aa4.94□□□□□ -1.62
FNDC3A-204ENST00000492622 TENM3Q9P273 2699 aa4.94□□□□□ -1.62
FNDC3A-204ENST00000492622 SPENQ96T58 3664 aaKnown RBP4.93□□□□□ -1.62
FNDC3A-204ENST00000492622 CSMD2Q7Z408 3487 aa4.93□□□□□ -1.62
FNDC3A-204ENST00000492622 H1FX-AS1Q4G0G2 97 aa4.92□□□□□ -1.62
FNDC3A-204ENST00000492622 KRTAP13-2Q52LG2 175 aa4.92□□□□□ -1.62
FNDC3A-204ENST00000492622 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
FNDC3A-204ENST00000492622 VWFP04275 2813 aa4.91□□□□□ -1.62
FNDC3A-204ENST00000492622 FBN1P35555 2871 aaKnown RBP4.9□□□□□ -1.62
FNDC3A-204ENST00000492622 RPL37P61927 97 aaKnown RBP4.9□□□□□ -1.63
FNDC3A-204ENST00000492622 LCE6AA0A183 80 aa4.89□□□□□ -1.63
FNDC3A-204ENST00000492622 M0QZ58 72 aa4.89□□□□□ -1.63
FNDC3A-204ENST00000492622 ZFHX3Q15911 3703 aa4.87□□□□□ -1.63
FNDC3A-204ENST00000492622 KRTAP13-1Q8IUC0 172 aa4.87□□□□□ -1.63
FNDC3A-204ENST00000492622 PDZD2O15018 2839 aa4.86□□□□□ -1.63
FNDC3A-204ENST00000492622 ROMO1P60602 79 aa4.86□□□□□ -1.63
FNDC3A-204ENST00000492622 TENM2Q9NT68 2774 aa4.84□□□□□ -1.63
FNDC3A-204ENST00000492622 A6NN06 94 aa4.84□□□□□ -1.64
FNDC3A-204ENST00000492622 TGP01266 2768 aa4.79□□□□□ -1.64
FNDC3A-204ENST00000492622 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.64
FNDC3A-204ENST00000492622 ASB16-AS1Q495Z4 193 aa4.75□□□□□ -1.65
FNDC3A-204ENST00000492622 SRRM2Q9UQ35 2752 aaKnown RBP4.73□□□□□ -1.65
FNDC3A-204ENST00000492622 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
FNDC3A-204ENST00000492622 OTOGQ6ZRI0 2925 aa4.71□□□□□ -1.66
FNDC3A-204ENST00000492622 A8MUU9 505 aa4.71□□□□□ -1.66
FNDC3A-204ENST00000492622 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
FNDC3A-204ENST00000492622 KRTAP1-4P0C5Y4 121 aa4.66□□□□□ -1.66
FNDC3A-204ENST00000492622 NDUFAF8A1L188 74 aa4.66□□□□□ -1.66
FNDC3A-204ENST00000492622 BSNQ9UPA5 3926 aa4.64□□□□□ -1.67
FNDC3A-204ENST00000492622 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
FNDC3A-204ENST00000492622 TRRAPQ9Y4A5 3859 aa4.63□□□□□ -1.67
FNDC3A-204ENST00000492622 C20orf166-AS1Q96NR2 134 aa4.62□□□□□ -1.67
FNDC3A-204ENST00000492622 RPS29P62273 56 aaKnown RBP4.62□□□□□ -1.67
FNDC3A-204ENST00000492622 PLAC4Q8WY50 150 aa4.62□□□□□ -1.67
FNDC3A-204ENST00000492622 FBN3Q75N90 2809 aa4.6□□□□□ -1.67
FNDC3A-204ENST00000492622 H0YAA0 97 aa4.59□□□□□ -1.67
FNDC3A-204ENST00000492622 A0A1B0GVY2 172 aa4.58□□□□□ -1.68
FNDC3A-204ENST00000492622 VPS13CQ709C8 3753 aa4.56□□□□□ -1.68
FNDC3A-204ENST00000492622 XP32Q5T750 250 aa4.55□□□□□ -1.68
FNDC3A-204ENST00000492622 KRTAP16-1A8MUX0 517 aa4.55□□□□□ -1.68
FNDC3A-204ENST00000492622 COL7A1Q02388 2944 aa4.52□□□□□ -1.69
FNDC3A-204ENST00000492622 P0C880 135 aa4.51□□□□□ -1.69
FNDC3A-204ENST00000492622 MEGF8Q7Z7M0 2845 aa4.49□□□□□ -1.69
FNDC3A-204ENST00000492622 CSMD3Q7Z407 3707 aa4.49□□□□□ -1.69
FNDC3A-204ENST00000492622 ANK3Q12955 4377 aaKnown RBP4.45□□□□□ -1.7
FNDC3A-204ENST00000492622 KRTAP10-8P60410 259 aa4.45□□□□□ -1.7
FNDC3A-204ENST00000492622 TNP1P09430 55 aa4.43□□□□□ -1.7
FNDC3A-204ENST00000492622 KRTAP13-3Q3SY46 172 aa4.43□□□□□ -1.7
FNDC3A-204ENST00000492622 ZNF469Q96JG9 3925 aaPredicted RBP4.35□□□□□ -1.71
FNDC3A-204ENST00000492622 KRTAP12-2P59991 146 aa4.33□□□□□ -1.72
FNDC3A-204ENST00000492622 TPRXLQ17RH7 258 aa4.31□□□□□ -1.72
FNDC3A-204ENST00000492622 KRTAP3-1Q9BYR8 98 aa4.31□□□□□ -1.72
FNDC3A-204ENST00000492622 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
FNDC3A-204ENST00000492622 KRTAP21-3Q3LHN1 58 aa4.29□□□□□ -1.72
FNDC3A-204ENST00000492622 KRTAP13-4Q3LI77 160 aa4.23□□□□□ -1.73
FNDC3A-204ENST00000492622 AKAP9Q99996 3911 aa4.23□□□□□ -1.73
FNDC3A-204ENST00000492622 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
FNDC3A-204ENST00000492622 KRTAP12-1P59990 96 aa4.2□□□□□ -1.74
FNDC3A-204ENST00000492622 HUWE1Q7Z6Z7 4374 aaKnown RBP4.18□□□□□ -1.74
FNDC3A-204ENST00000492622 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
FNDC3A-204ENST00000492622 KRTAP4-5Q9BYR2 181 aa4.02□□□□□ -1.77
FNDC3A-204ENST00000492622 KRTAP3-3Q9BYR6 98 aa4.02□□□□□ -1.77
FNDC3A-204ENST00000492622 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
FNDC3A-204ENST00000492622 DNAH10Q8IVF4 4471 aa4.01□□□□□ -1.77
FNDC3A-204ENST00000492622 MT1HL1P0DM35 61 aa4□□□□□ -1.77
FNDC3A-204ENST00000492622 KRTAP3-2Q9BYR7 98 aa4□□□□□ -1.77
FNDC3A-204ENST00000492622 DNAH9Q9NYC9 4486 aa3.94□□□□□ -1.78
FNDC3A-204ENST00000492622 KRTAP10-4P60372 401 aaPredicted RBP3.94□□□□□ -1.78
FNDC3A-204ENST00000492622 PLECQ15149 4684 aaKnown RBP3.92□□□□□ -1.78
FNDC3A-204ENST00000492622 DNAH11Q96DT5 4516 aa3.91□□□□□ -1.78
FNDC3A-204ENST00000492622 DNAH1Q9P2D7 4330 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms