RNA–Protein interactions for RNA: ENST00000492136.1

UBP1-212, Transcript of upstream binding protein 1, humanhuman

TSL 2

Gene UBP1, Length 7,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-212ENST00000492136 COL6A5A8TX70 2615 aa3.79□□□□□ -1.8
UBP1-212ENST00000492136 LRBAP50851 2863 aa3.79□□□□□ -1.8
UBP1-212ENST00000492136 SPTBN5Q9NRC6 3674 aaKnown RBP3.79□□□□□ -1.8
UBP1-212ENST00000492136 APCP25054 2843 aa3.78□□□□□ -1.8
UBP1-212ENST00000492136 KRTAP11-1Q8IUC1 163 aa3.78□□□□□ -1.8
UBP1-212ENST00000492136 LAMA5O15230 3695 aa3.78□□□□□ -1.81
UBP1-212ENST00000492136 ZNF292O60281 2723 aa3.77□□□□□ -1.81
UBP1-212ENST00000492136 CRYBG3Q68DQ2 2970 aa3.77□□□□□ -1.81
UBP1-212ENST00000492136 UNC79Q9P2D8 2635 aa3.77□□□□□ -1.81
UBP1-212ENST00000492136 ATMQ13315 3056 aa3.75□□□□□ -1.81
UBP1-212ENST00000492136 BOD1L1Q8NFC6 3051 aa3.75□□□□□ -1.81
UBP1-212ENST00000492136 GCN1Q92616 2671 aaKnown RBP3.73□□□□□ -1.81
UBP1-212ENST00000492136 NSD1Q96L73 2696 aaPredicted RBP3.73□□□□□ -1.81
UBP1-212ENST00000492136 CSMD1Q96PZ7 3565 aa3.72□□□□□ -1.81
UBP1-212ENST00000492136 FRYLO94915 3013 aa3.72□□□□□ -1.81
UBP1-212ENST00000492136 UBR5O95071 2799 aaPredicted RBP3.71□□□□□ -1.82
UBP1-212ENST00000492136 RPS29P62273 56 aaKnown RBP3.7□□□□□ -1.82
UBP1-212ENST00000492136 COL12A1Q99715 3063 aa3.7□□□□□ -1.82
UBP1-212ENST00000492136 KRTAP13-2Q52LG2 175 aa3.69□□□□□ -1.82
UBP1-212ENST00000492136 NBPF19A0A087WUL8 3843 aa3.68□□□□□ -1.82
UBP1-212ENST00000492136 RELNP78509 3460 aa3.68□□□□□ -1.82
UBP1-212ENST00000492136 KRTAP21-3Q3LHN1 58 aa3.67□□□□□ -1.82
UBP1-212ENST00000492136 ITPR2Q14571 2701 aa3.67□□□□□ -1.82
UBP1-212ENST00000492136 Q6ZRN7 208 aaPredicted RBP3.66□□□□□ -1.82
UBP1-212ENST00000492136 ZFHX4Q86UP3 3567 aa3.66□□□□□ -1.82
UBP1-212ENST00000492136 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
UBP1-212ENST00000492136 STAB2Q8WWQ8 2551 aa3.66□□□□□ -1.82
UBP1-212ENST00000492136 ZZEF1O43149 2961 aa3.65□□□□□ -1.82
UBP1-212ENST00000492136 DMXL1Q9Y485 3027 aa3.65□□□□□ -1.83
UBP1-212ENST00000492136 KRTAP7-1Q8IUC3 87 aa3.64□□□□□ -1.83
UBP1-212ENST00000492136 NBEAL2Q6ZNJ1 2754 aa3.64□□□□□ -1.83
UBP1-212ENST00000492136 EYSQ5T1H1 3165 aa3.64□□□□□ -1.83
UBP1-212ENST00000492136 ADGRG4Q8IZF6 3080 aa3.64□□□□□ -1.83
UBP1-212ENST00000492136 DMXL2Q8TDJ6 3036 aa3.64□□□□□ -1.83
UBP1-212ENST00000492136 H0YAA0 97 aa3.64□□□□□ -1.83
UBP1-212ENST00000492136 UTP20O75691 2785 aaKnown RBP3.62□□□□□ -1.83
UBP1-212ENST00000492136 IGSF10Q6WRI0 2623 aa3.62□□□□□ -1.83
UBP1-212ENST00000492136 TACC2O95359 2948 aa3.62□□□□□ -1.83
UBP1-212ENST00000492136 FLNCQ14315 2725 aa3.62□□□□□ -1.83
UBP1-212ENST00000492136 SPENQ96T58 3664 aaKnown RBP3.6□□□□□ -1.83
UBP1-212ENST00000492136 LORP23490 312 aaPredicted RBP3.59□□□□□ -1.84
UBP1-212ENST00000492136 KRTAP13-1Q8IUC0 172 aa3.58□□□□□ -1.84
UBP1-212ENST00000492136 ITPR1Q14643 2758 aa3.57□□□□□ -1.84
UBP1-212ENST00000492136 TNRC18O15417 2968 aaPredicted RBP3.57□□□□□ -1.84
UBP1-212ENST00000492136 DMDP11532 3685 aa3.56□□□□□ -1.84
UBP1-212ENST00000492136 KRTAP10-6P60371 365 aaPredicted RBP3.55□□□□□ -1.84
UBP1-212ENST00000492136 XP32Q5T750 250 aa3.55□□□□□ -1.84
UBP1-212ENST00000492136 HIVEP1P15822 2718 aa3.53□□□□□ -1.84
UBP1-212ENST00000492136 SMG1Q96Q15 3661 aaKnown RBP3.52□□□□□ -1.85
UBP1-212ENST00000492136 NBEAQ8NFP9 2946 aa3.52□□□□□ -1.85
UBP1-212ENST00000492136 ZFHX3Q15911 3703 aa3.51□□□□□ -1.85
UBP1-212ENST00000492136 KRTAP12-2P59991 146 aa3.49□□□□□ -1.85
UBP1-212ENST00000492136 CELSR2Q9HCU4 2923 aa3.49□□□□□ -1.85
UBP1-212ENST00000492136 CELSR1Q9NYQ6 3014 aa3.48□□□□□ -1.85
UBP1-212ENST00000492136 TENM4Q6N022 2769 aa3.48□□□□□ -1.85
UBP1-212ENST00000492136 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
UBP1-212ENST00000492136 DNHD1Q96M86 4753 aa3.43□□□□□ -1.86
UBP1-212ENST00000492136 MUC3AQ02505 3323 aa3.43□□□□□ -1.86
UBP1-212ENST00000492136 NIPBLQ6KC79 2804 aaeCLIP3.42□□□□□ -1.86
UBP1-212ENST00000492136 TENM3Q9P273 2699 aa3.42□□□□□ -1.86
UBP1-212ENST00000492136 TPRXLQ17RH7 258 aa3.42□□□□□ -1.86
UBP1-212ENST00000492136 ZANQ9Y493 2812 aa3.41□□□□□ -1.86
UBP1-212ENST00000492136 DCHS2Q6V1P9 2916 aa3.41□□□□□ -1.86
UBP1-212ENST00000492136 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
UBP1-212ENST00000492136 NF1P21359 2839 aa3.4□□□□□ -1.87
UBP1-212ENST00000492136 SVEP1Q4LDE5 3571 aa3.37□□□□□ -1.87
UBP1-212ENST00000492136 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
UBP1-212ENST00000492136 KRTAP13-3Q3SY46 172 aa3.35□□□□□ -1.87
UBP1-212ENST00000492136 CUBNO60494 3623 aa3.35□□□□□ -1.87
UBP1-212ENST00000492136 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
UBP1-212ENST00000492136 VPS13CQ709C8 3753 aa3.34□□□□□ -1.87
UBP1-212ENST00000492136 CSMD2Q7Z408 3487 aa3.34□□□□□ -1.88
UBP1-212ENST00000492136 TGP01266 2768 aa3.33□□□□□ -1.88
UBP1-212ENST00000492136 HYDINQ4G0P3 5121 aa3.33□□□□□ -1.88
UBP1-212ENST00000492136 PKD1L1Q8TDX9 2849 aa3.32□□□□□ -1.88
UBP1-212ENST00000492136 TENM1Q9UKZ4 2725 aa3.32□□□□□ -1.88
UBP1-212ENST00000492136 FBN2P35556 2912 aa3.31□□□□□ -1.88
UBP1-212ENST00000492136 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
UBP1-212ENST00000492136 AKAP9Q99996 3911 aa3.29□□□□□ -1.88
UBP1-212ENST00000492136 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
UBP1-212ENST00000492136 SRRM2Q9UQ35 2752 aaKnown RBP3.26□□□□□ -1.89
UBP1-212ENST00000492136 BSNQ9UPA5 3926 aa3.26□□□□□ -1.89
UBP1-212ENST00000492136 RYR1P21817 5038 aa3.26□□□□□ -1.89
UBP1-212ENST00000492136 PCLOQ9Y6V0 5065 aa3.24□□□□□ -1.89
UBP1-212ENST00000492136 VWFP04275 2813 aa3.24□□□□□ -1.89
UBP1-212ENST00000492136 CSMD3Q7Z407 3707 aa3.23□□□□□ -1.89
UBP1-212ENST00000492136 TENM2Q9NT68 2774 aa3.22□□□□□ -1.89
UBP1-212ENST00000492136 HRNRQ86YZ3 2850 aaPredicted RBP3.2□□□□□ -1.9
UBP1-212ENST00000492136 MXRA5Q9NR99 2828 aa3.19□□□□□ -1.9
UBP1-212ENST00000492136 INE1O15225 51 aa3.19□□□□□ -1.9
UBP1-212ENST00000492136 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
UBP1-212ENST00000492136 PDZD2O15018 2839 aa3.17□□□□□ -1.9
UBP1-212ENST00000492136 RYR2Q92736 4967 aa3.16□□□□□ -1.9
UBP1-212ENST00000492136 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
UBP1-212ENST00000492136 KIAA1109Q2LD37 5005 aa3.15□□□□□ -1.9
UBP1-212ENST00000492136 ABCA13Q86UQ4 5058 aa3.15□□□□□ -1.9
UBP1-212ENST00000492136 FBN1P35555 2871 aaKnown RBP3.15□□□□□ -1.91
UBP1-212ENST00000492136 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
UBP1-212ENST00000492136 TRRAPQ9Y4A5 3859 aa3.11□□□□□ -1.91
UBP1-212ENST00000492136 KRTAP3-1Q9BYR8 98 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms