RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 STAB1Q9NY15 2570 aa6.69□□□□□ -1.34
CRNKL1-204ENST00000490910 APLNQ9ULZ1 77 aa6.69□□□□□ -1.34
CRNKL1-204ENST00000490910 SVEP1Q4LDE5 3571 aa6.69□□□□□ -1.34
CRNKL1-204ENST00000490910 LINC00483Q53H64 154 aa6.68□□□□□ -1.34
CRNKL1-204ENST00000490910 NIPBLQ6KC79 2804 aaeCLIP6.68□□□□□ -1.342e-6■■□□□ 12.2
CRNKL1-204ENST00000490910 CRYBG3Q68DQ2 2970 aa6.68□□□□□ -1.34
CRNKL1-204ENST00000490910 MUC3AQ02505 3323 aa6.67□□□□□ -1.34
CRNKL1-204ENST00000490910 NSD1Q96L73 2696 aaPredicted RBP6.66□□□□□ -1.34
CRNKL1-204ENST00000490910 CRIPTQ9P021 101 aa6.66□□□□□ -1.34
CRNKL1-204ENST00000490910 FLG2Q5D862 2391 aaPredicted RBP6.64□□□□□ -1.35
CRNKL1-204ENST00000490910 PANO1I0J062 215 aa6.62□□□□□ -1.35
CRNKL1-204ENST00000490910 DMBT1Q9UGM3 2413 aaPredicted RBP6.62□□□□□ -1.35
CRNKL1-204ENST00000490910 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
CRNKL1-204ENST00000490910 A0A0D9SG42 100 aa6.58□□□□□ -1.36
CRNKL1-204ENST00000490910 KRTAP13-1Q8IUC0 172 aa6.57□□□□□ -1.36
CRNKL1-204ENST00000490910 ITPR2Q14571 2701 aa6.57□□□□□ -1.36
CRNKL1-204ENST00000490910 STAB2Q8WWQ8 2551 aa6.56□□□□□ -1.36
CRNKL1-204ENST00000490910 C9orf92A6NGG3 77 aa6.55□□□□□ -1.36
CRNKL1-204ENST00000490910 ROMO1P60602 79 aa6.55□□□□□ -1.36
CRNKL1-204ENST00000490910 CUBNO60494 3623 aa6.54□□□□□ -1.36
CRNKL1-204ENST00000490910 LINC00304Q8N9R0 145 aa6.53□□□□□ -1.36
CRNKL1-204ENST00000490910 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.37
CRNKL1-204ENST00000490910 RPL37P61927 97 aaKnown RBP6.45□□□□□ -1.38
CRNKL1-204ENST00000490910 TENM3Q9P273 2699 aa6.44□□□□□ -1.38
CRNKL1-204ENST00000490910 A8MUU9 505 aa6.42□□□□□ -1.38
CRNKL1-204ENST00000490910 KMT2BQ9UMN6 2715 aaPredicted RBP6.4□□□□□ -1.38
CRNKL1-204ENST00000490910 Q6ZSA8 131 aa6.37□□□□□ -1.39
CRNKL1-204ENST00000490910 Q6ZRN7 208 aaPredicted RBP6.36□□□□□ -1.39
CRNKL1-204ENST00000490910 KRTAP13-3Q3SY46 172 aa6.36□□□□□ -1.39
CRNKL1-204ENST00000490910 VWFP04275 2813 aa6.35□□□□□ -1.39
CRNKL1-204ENST00000490910 NDUFAF8A1L188 74 aa6.34□□□□□ -1.39
CRNKL1-204ENST00000490910 KRTAP16-1A8MUX0 517 aa6.33□□□□□ -1.4
CRNKL1-204ENST00000490910 PDZD2O15018 2839 aa6.33□□□□□ -1.4
CRNKL1-204ENST00000490910 H0YAA0 97 aa6.32□□□□□ -1.4
CRNKL1-204ENST00000490910 ZFHX3Q15911 3703 aa6.32□□□□□ -1.4
CRNKL1-204ENST00000490910 PKD1L1Q8TDX9 2849 aa6.29□□□□□ -1.4
CRNKL1-204ENST00000490910 KRTAP13-2Q52LG2 175 aa6.29□□□□□ -1.4
CRNKL1-204ENST00000490910 LUZP6Q538Z0 58 aa6.28□□□□□ -1.4
CRNKL1-204ENST00000490910 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
CRNKL1-204ENST00000490910 BSNQ9UPA5 3926 aa6.27□□□□□ -1.41
CRNKL1-204ENST00000490910 TENM1Q9UKZ4 2725 aa6.27□□□□□ -1.41
CRNKL1-204ENST00000490910 TGP01266 2768 aa6.27□□□□□ -1.41
CRNKL1-204ENST00000490910 SMR3BP02814 79 aaPredicted RBP6.27□□□□□ -1.41
CRNKL1-204ENST00000490910 SRRM2Q9UQ35 2752 aaKnown RBP6.23□□□□□ -1.41
CRNKL1-204ENST00000490910 CSMD2Q7Z408 3487 aa6.22□□□□□ -1.41
CRNKL1-204ENST00000490910 S4R3F8 94 aa6.22□□□□□ -1.41
CRNKL1-204ENST00000490910 KRTAP10-2P60368 255 aa6.21□□□□□ -1.42
CRNKL1-204ENST00000490910 C20orf166-AS1Q96NR2 134 aa6.2□□□□□ -1.42
CRNKL1-204ENST00000490910 KRTAP10-1P60331 282 aa6.18□□□□□ -1.42
CRNKL1-204ENST00000490910 A0A0A0MQY5 61 aa6.18□□□□□ -1.42
CRNKL1-204ENST00000490910 TENM4Q6N022 2769 aa6.13□□□□□ -1.43
CRNKL1-204ENST00000490910 C10orf95Q9H7T3 257 aa6.13□□□□□ -1.43
CRNKL1-204ENST00000490910 RPS29P62273 56 aaKnown RBP6.11□□□□□ -1.43
CRNKL1-204ENST00000490910 VPS13CQ709C8 3753 aa6.04□□□□□ -1.44
CRNKL1-204ENST00000490910 FBN1P35555 2871 aaKnown RBP6.04□□□□□ -1.44
CRNKL1-204ENST00000490910 KRTAP1-4P0C5Y4 121 aa6.03□□□□□ -1.44
CRNKL1-204ENST00000490910 P0C880 135 aa6.02□□□□□ -1.45
CRNKL1-204ENST00000490910 R4GN34 69 aa6.02□□□□□ -1.45
CRNKL1-204ENST00000490910 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
CRNKL1-204ENST00000490910 TENM2Q9NT68 2774 aa5.99□□□□□ -1.45
CRNKL1-204ENST00000490910 M0QZ58 72 aa5.98□□□□□ -1.45
CRNKL1-204ENST00000490910 OTOGQ6ZRI0 2925 aa5.96□□□□□ -1.45
CRNKL1-204ENST00000490910 TPRXLQ17RH7 258 aa5.94□□□□□ -1.46
CRNKL1-204ENST00000490910 NBPF19A0A087WUL8 3843 aa5.91□□□□□ -1.46
CRNKL1-204ENST00000490910 FBN3Q75N90 2809 aa5.9□□□□□ -1.46
CRNKL1-204ENST00000490910 TRRAPQ9Y4A5 3859 aa5.9□□□□□ -1.47
CRNKL1-204ENST00000490910 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
CRNKL1-204ENST00000490910 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
CRNKL1-204ENST00000490910 COL7A1Q02388 2944 aa5.87□□□□□ -1.47
CRNKL1-204ENST00000490910 ANK3Q12955 4377 aaKnown RBP5.86□□□□□ -1.47
CRNKL1-204ENST00000490910 MEGF8Q7Z7M0 2845 aa5.79□□□□□ -1.48
CRNKL1-204ENST00000490910 AKAP9Q99996 3911 aa5.77□□□□□ -1.49
CRNKL1-204ENST00000490910 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
CRNKL1-204ENST00000490910 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
CRNKL1-204ENST00000490910 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
CRNKL1-204ENST00000490910 KRTAP10-6P60371 365 aaPredicted RBP5.73□□□□□ -1.49
CRNKL1-204ENST00000490910 ZNF469Q96JG9 3925 aaPredicted RBP5.72□□□□□ -1.49
CRNKL1-204ENST00000490910 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
CRNKL1-204ENST00000490910 KRTAP10-8P60410 259 aa5.69□□□□□ -1.5
CRNKL1-204ENST00000490910 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
CRNKL1-204ENST00000490910 Q5VSD8 79 aa5.67□□□□□ -1.5
CRNKL1-204ENST00000490910 CSMD3Q7Z407 3707 aa5.66□□□□□ -1.5
CRNKL1-204ENST00000490910 XP32Q5T750 250 aa5.66□□□□□ -1.5
CRNKL1-204ENST00000490910 SEC61BP60468 96 aaKnown RBP5.61□□□□□ -1.51
CRNKL1-204ENST00000490910 KRTAP3-2Q9BYR7 98 aa5.58□□□□□ -1.52
CRNKL1-204ENST00000490910 J3QL48 77 aa5.56□□□□□ -1.52
CRNKL1-204ENST00000490910 TNP1P09430 55 aa5.56□□□□□ -1.52
CRNKL1-204ENST00000490910 ALMS1Q8TCU4 4167 aa5.54□□□□□ -1.52
CRNKL1-204ENST00000490910 KRTAP3-3Q9BYR6 98 aa5.54□□□□□ -1.52
CRNKL1-204ENST00000490910 HUWE1Q7Z6Z7 4374 aaKnown RBP5.5□□□□□ -1.53
CRNKL1-204ENST00000490910 DNAH10Q8IVF4 4471 aa5.46□□□□□ -1.54
CRNKL1-204ENST00000490910 M0R2T5 61 aa5.34□□□□□ -1.56
CRNKL1-204ENST00000490910 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
CRNKL1-204ENST00000490910 DNAH1Q9P2D7 4330 aa5.26□□□□□ -1.57
CRNKL1-204ENST00000490910 A0A1B0GVY2 172 aa5.26□□□□□ -1.57
CRNKL1-204ENST00000490910 PLECQ15149 4684 aaKnown RBP5.24□□□□□ -1.57
CRNKL1-204ENST00000490910 DNAH9Q9NYC9 4486 aa5.2□□□□□ -1.58
CRNKL1-204ENST00000490910 DNAH11Q96DT5 4516 aa5.19□□□□□ -1.58
CRNKL1-204ENST00000490910 DNAH17Q9UFH2 4485 aa5.18□□□□□ -1.58
CRNKL1-204ENST00000490910 KRTAP10-4P60372 401 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 250.3 ms