RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 BAALC-AS2P0C853 105 aa13.83□□□□□ -0.2
HOXB3-211ENST00000490677 FAM236DA0A1B0GTK5 79 aa13.81□□□□□ -0.2
HOXB3-211ENST00000490677 FAM236CP0DP71 79 aa13.81□□□□□ -0.2
HOXB3-211ENST00000490677 Q6ZQT0 140 aa13.78□□□□□ -0.2
HOXB3-211ENST00000490677 RBM12B-AS1Q9P1G2 102 aa13.78□□□□□ -0.2
HOXB3-211ENST00000490677 C9JAW5 83 aa13.77□□□□□ -0.21
HOXB3-211ENST00000490677 SMIM6P0DI80 62 aa13.76□□□□□ -0.21
HOXB3-211ENST00000490677 J3KT08 172 aa13.75□□□□□ -0.21
HOXB3-211ENST00000490677 MT1FP04733 61 aa13.74□□□□□ -0.21
HOXB3-211ENST00000490677 ZCCHC13Q8WW36 166 aaKnown RBP13.73□□□□□ -0.21
HOXB3-211ENST00000490677 LOC105371267A0A1B0GV96 52 aa13.71□□□□□ -0.21
HOXB3-211ENST00000490677 C21orf62-AS1Q17RA5 79 aa13.71□□□□□ -0.21
HOXB3-211ENST00000490677 Q8N9P0 234 aaPredicted RBP13.7□□□□□ -0.22
HOXB3-211ENST00000490677 NAA38Q9BRA0 125 aaKnown RBP13.7□□□□□ -0.22
HOXB3-211ENST00000490677 LOC110117498A0A087WWA1 95 aa13.66□□□□□ -0.22
HOXB3-211ENST00000490677 LCE2BO14633 110 aa13.65□□□□□ -0.22
HOXB3-211ENST00000490677 ATXN8Q156A1 80 aa13.65□□□□□ -0.22
HOXB3-211ENST00000490677 KRTAP9-3Q9BYQ3 159 aa13.65□□□□□ -0.22
HOXB3-211ENST00000490677 SPINK7P58062 85 aa13.64□□□□□ -0.23
HOXB3-211ENST00000490677 JMJD7-PLA2G4BH0Y9G9 81 aa13.62□□□□□ -0.23
HOXB3-211ENST00000490677 M0R143 59 aa13.62□□□□□ -0.23
HOXB3-211ENST00000490677 A0A1B0GW54 56 aa13.61□□□□□ -0.23
HOXB3-211ENST00000490677 C8orf17Q9NRJ1 99 aa13.61□□□□□ -0.23
HOXB3-211ENST00000490677 A8MWP4 228 aa13.6□□□□□ -0.23
HOXB3-211ENST00000490677 IGKV3D-7A0A0C4DH55 119 aa13.59□□□□□ -0.23
HOXB3-211ENST00000490677 NDUFB1O75438 58 aa13.59□□□□□ -0.23
HOXB3-211ENST00000490677 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.58□□□□□ -0.24
HOXB3-211ENST00000490677 KRTAP10-10P60014 251 aa13.55□□□□□ -0.24
HOXB3-211ENST00000490677 FCGBPQ9Y6R7 5405 aaPredicted RBP13.54□□□□□ -0.24
HOXB3-211ENST00000490677 C14orf132Q9NPU4 83 aa13.54□□□□□ -0.24
HOXB3-211ENST00000490677 PDE6GP18545 87 aa13.53□□□□□ -0.24
HOXB3-211ENST00000490677 MTURNQ8N3F0 131 aa13.53□□□□□ -0.24
HOXB3-211ENST00000490677 TSTD3H0UI37 97 aa13.5□□□□□ -0.25
HOXB3-211ENST00000490677 Q6ZVQ6 151 aa13.47□□□□□ -0.25
HOXB3-211ENST00000490677 PRR15Q8IV56 129 aa13.47□□□□□ -0.25
HOXB3-211ENST00000490677 WFDC13Q8IUB5 93 aa13.45□□□□□ -0.26
HOXB3-211ENST00000490677 KRTAP19-1Q8IUB9 90 aa13.44□□□□□ -0.26
HOXB3-211ENST00000490677 KRTAP9-7A8MTY7 169 aa13.43□□□□□ -0.26
HOXB3-211ENST00000490677 MMP24-AS1A0A0U1RRL7 71 aa13.42□□□□□ -0.26
HOXB3-211ENST00000490677 NREPQ16612 68 aa13.39□□□□□ -0.27
HOXB3-211ENST00000490677 LYRM7Q5U5X0 104 aa13.38□□□□□ -0.27
HOXB3-211ENST00000490677 TMEM254Q8TBM7 123 aa13.36□□□□□ -0.27
HOXB3-211ENST00000490677 MRPL34Q9BQ48 92 aaKnown RBP13.35□□□□□ -0.27
HOXB3-211ENST00000490677 K7EQZ3 153 aa13.31□□□□□ -0.28
HOXB3-211ENST00000490677 BATFQ16520 125 aa13.3□□□□□ -0.28
HOXB3-211ENST00000490677 H3BT86 120 aa13.27□□□□□ -0.29
HOXB3-211ENST00000490677 hDV103S1A0JD37 113 aa13.26□□□□□ -0.29
HOXB3-211ENST00000490677 C9orf118A6NHY6 69 aa13.26□□□□□ -0.29
HOXB3-211ENST00000490677 TAX1BP3O14907 124 aa13.24□□□□□ -0.29
HOXB3-211ENST00000490677 A0A1W2PPM0 123 aa13.2□□□□□ -0.3
HOXB3-211ENST00000490677 Q5W150 140 aa13.18□□□□□ -0.3
HOXB3-211ENST00000490677 KRTAP19-6Q3LI70 58 aa13.17□□□□□ -0.3
HOXB3-211ENST00000490677 H1FX-AS1Q4G0G2 97 aa13.17□□□□□ -0.3
HOXB3-211ENST00000490677 NDUFS5O43920 106 aa13.15□□□□□ -0.3
HOXB3-211ENST00000490677 BPY2O14599 106 aa13.13□□□□□ -0.31
HOXB3-211ENST00000490677 Q8N9L7 120 aa13.09□□□□□ -0.31
HOXB3-211ENST00000490677 MACF1Q9UPN3 7388 aaKnown RBP13.08□□□□□ -0.32
HOXB3-211ENST00000490677 IGKV2D-30A0A075B6S6 120 aa13.07□□□□□ -0.32
HOXB3-211ENST00000490677 IGKV2-30P06310 120 aa13.07□□□□□ -0.32
HOXB3-211ENST00000490677 SMCPP49901 116 aaPredicted RBP13.05□□□□□ -0.32
HOXB3-211ENST00000490677 C7orf65Q6ZTY9 151 aa13.05□□□□□ -0.32
HOXB3-211ENST00000490677 CASC2Q6XLA1 102 aa13.01□□□□□ -0.33
HOXB3-211ENST00000490677 HCG22E2RYF7 251 aa12.98□□□□□ -0.33
HOXB3-211ENST00000490677 COL5A1-AS1Q5SY13 56 aa12.97□□□□□ -0.33
HOXB3-211ENST00000490677 SPCS1Q9Y6A9 102 aa12.97□□□□□ -0.33
HOXB3-211ENST00000490677 PCP4L1A6NKN8 68 aa12.95□□□□□ -0.34
HOXB3-211ENST00000490677 LINC00846Q9NV44 126 aa12.94□□□□□ -0.34
HOXB3-211ENST00000490677 C4orf26Q17RF5 130 aa12.91□□□□□ -0.34
HOXB3-211ENST00000490677 SYNE2Q8WXH0 6885 aaKnown RBP12.91□□□□□ -0.34
HOXB3-211ENST00000490677 PRO0461Q9UI25 63 aa12.9□□□□□ -0.34
HOXB3-211ENST00000490677 CXCL6P80162 114 aa12.89□□□□□ -0.35
HOXB3-211ENST00000490677 KRTAP3-1Q9BYR8 98 aa12.83□□□□□ -0.36
HOXB3-211ENST00000490677 UBL5Q9BZL1 73 aa12.78□□□□□ -0.36
HOXB3-211ENST00000490677 K7EP34 96 aa12.74□□□□□ -0.37
HOXB3-211ENST00000490677 C5orf47Q569G3 176 aa12.71□□□□□ -0.37
HOXB3-211ENST00000490677 GTF2H5Q6ZYL4 71 aa12.63□□□□□ -0.39
HOXB3-211ENST00000490677 C1orf64Q8NEQ6 169 aa12.63□□□□□ -0.39
HOXB3-211ENST00000490677 S4R3F8 94 aa12.63□□□□□ -0.39
HOXB3-211ENST00000490677 KRTAP6-3Q3LI67 103 aa12.61□□□□□ -0.39
HOXB3-211ENST00000490677 LCA10Q71F78 164 aa12.6□□□□□ -0.39
HOXB3-211ENST00000490677 MT1BP07438 61 aa12.59□□□□□ -0.39
HOXB3-211ENST00000490677 TP53AIP1Q9HCN2 124 aa12.57□□□□□ -0.4
HOXB3-211ENST00000490677 FAM236AA0A1B0GUQ0 79 aa12.54□□□□□ -0.4
HOXB3-211ENST00000490677 FAM236BA0A1B0GV22 79 aa12.54□□□□□ -0.4
HOXB3-211ENST00000490677 CSAG1Q6PB30 78 aa12.54□□□□□ -0.4
HOXB3-211ENST00000490677 SPRR2GQ9BYE4 73 aa12.54□□□□□ -0.4
HOXB3-211ENST00000490677 KRTAP19-8Q3LI54 63 aa12.51□□□□□ -0.41
HOXB3-211ENST00000490677 F8W1H4 67 aa12.5□□□□□ -0.41
HOXB3-211ENST00000490677 KRTAP3-3Q9BYR6 98 aa12.49□□□□□ -0.41
HOXB3-211ENST00000490677 ETDBQ3ZM63 59 aa12.48□□□□□ -0.41
HOXB3-211ENST00000490677 CYP4F30PQ9H0H9 118 aa12.43□□□□□ -0.42
HOXB3-211ENST00000490677 Q5VV11 94 aa12.42□□□□□ -0.42
HOXB3-211ENST00000490677 A6NN06 94 aa12.38□□□□□ -0.43
HOXB3-211ENST00000490677 KLKP1Q107X0 134 aa12.37□□□□□ -0.43
HOXB3-211ENST00000490677 A0A087WVE0 104 aa12.36□□□□□ -0.43
HOXB3-211ENST00000490677 KRTAP10-5P60370 271 aa12.3□□□□□ -0.44
HOXB3-211ENST00000490677 TRAV22A0A0B4J277 110 aa12.29□□□□□ -0.44
HOXB3-211ENST00000490677 A0A1B0GV90 55 aa12.26□□□□□ -0.45
HOXB3-211ENST00000490677 LOC101927531A0A1B0GV80 90 aa12.25□□□□□ -0.45
HOXB3-211ENST00000490677 MUC12Q9UKN1 5478 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms