RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 C5orf47Q569G3 176 aa7.85□□□□□ -1.15
RIPPLY3-203ENST00000490393 hDV103S1A0JD37 113 aa7.85□□□□□ -1.15
RIPPLY3-203ENST00000490393 A0A0U1RQV1 116 aa7.84□□□□□ -1.15
RIPPLY3-203ENST00000490393 LIMD2Q9BT23 127 aa7.84□□□□□ -1.15
RIPPLY3-203ENST00000490393 NDUFC1O43677 76 aa7.83□□□□□ -1.16
RIPPLY3-203ENST00000490393 SPINK1P00995 79 aa7.83□□□□□ -1.16
RIPPLY3-203ENST00000490393 TMEM258P61165 79 aa7.83□□□□□ -1.16
RIPPLY3-203ENST00000490393 PKHD1L1Q86WI1 4243 aa7.82□□□□□ -1.16
RIPPLY3-203ENST00000490393 IGHV6-1A0A0B4J1U7 121 aa7.82□□□□□ -1.16
RIPPLY3-203ENST00000490393 C1orf195Q5TG92 126 aa7.82□□□□□ -1.16
RIPPLY3-203ENST00000490393 SNURFQ9Y675 71 aa7.82□□□□□ -1.16
RIPPLY3-203ENST00000490393 H7BZZ5 65 aa7.81□□□□□ -1.16
RIPPLY3-203ENST00000490393 SPAG11AQ6PDA7 123 aa7.81□□□□□ -1.16
RIPPLY3-203ENST00000490393 RPS29P62273 56 aaKnown RBP7.81□□□□□ -1.16
RIPPLY3-203ENST00000490393 PRR26Q8N8Z3 221 aa7.81□□□□□ -1.16
RIPPLY3-203ENST00000490393 C8orf87E5RJ46 101 aa7.79□□□□□ -1.16
RIPPLY3-203ENST00000490393 TP53AIP1Q9HCN2 124 aa7.79□□□□□ -1.16
RIPPLY3-203ENST00000490393 FAM229AH3BQW9 127 aa7.78□□□□□ -1.16
RIPPLY3-203ENST00000490393 ZCCHC13Q8WW36 166 aaKnown RBP7.78□□□□□ -1.16
RIPPLY3-203ENST00000490393 NOTCH2NLQ7Z3S9 236 aa7.77□□□□□ -1.17
RIPPLY3-203ENST00000490393 LINC00304Q8N9R0 145 aa7.77□□□□□ -1.17
RIPPLY3-203ENST00000490393 MRPL34Q9BQ48 92 aaKnown RBP7.77□□□□□ -1.17
RIPPLY3-203ENST00000490393 HSPG2P98160 4391 aa7.76□□□□□ -1.17
RIPPLY3-203ENST00000490393 H3BPC8 53 aa7.76□□□□□ -1.17
RIPPLY3-203ENST00000490393 MP68P56378 58 aa7.75□□□□□ -1.17
RIPPLY3-203ENST00000490393 RYR1P21817 5038 aa7.74□□□□□ -1.17
RIPPLY3-203ENST00000490393 LINC00313P59037 77 aa7.72□□□□□ -1.17
RIPPLY3-203ENST00000490393 H0Y9P7 68 aa7.71□□□□□ -1.18
RIPPLY3-203ENST00000490393 RPS28P62857 69 aaKnown RBP7.7□□□□□ -1.18
RIPPLY3-203ENST00000490393 TRAV22A0A0B4J277 110 aa7.7□□□□□ -1.18
RIPPLY3-203ENST00000490393 FAM236DA0A1B0GTK5 79 aa7.7□□□□□ -1.18
RIPPLY3-203ENST00000490393 FAM236CP0DP71 79 aa7.7□□□□□ -1.18
RIPPLY3-203ENST00000490393 ATP5EP56381 51 aaPredicted RBP7.68□□□□□ -1.18
RIPPLY3-203ENST00000490393 LINC00208Q96KT6 92 aa7.68□□□□□ -1.18
RIPPLY3-203ENST00000490393 Q5VSD8 79 aa7.68□□□□□ -1.18
RIPPLY3-203ENST00000490393 NDUFS5O43920 106 aa7.67□□□□□ -1.18
RIPPLY3-203ENST00000490393 Q8N9P0 234 aaPredicted RBP7.67□□□□□ -1.18
RIPPLY3-203ENST00000490393 J3QL48 77 aa7.66□□□□□ -1.18
RIPPLY3-203ENST00000490393 C1orf64Q8NEQ6 169 aa7.65□□□□□ -1.18
RIPPLY3-203ENST00000490393 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
RIPPLY3-203ENST00000490393 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
RIPPLY3-203ENST00000490393 TNXBP22105 4242 aa7.62□□□□□ -1.19
RIPPLY3-203ENST00000490393 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
RIPPLY3-203ENST00000490393 SERP1Q9Y6X1 66 aa7.6□□□□□ -1.19
RIPPLY3-203ENST00000490393 Q5W150 140 aa7.59□□□□□ -1.19
RIPPLY3-203ENST00000490393 Q8N1X5 172 aa7.59□□□□□ -1.19
RIPPLY3-203ENST00000490393 KRTAP17-1Q9BYP8 105 aa7.59□□□□□ -1.19
RIPPLY3-203ENST00000490393 FAT3Q8TDW7 4589 aa7.59□□□□□ -1.2
RIPPLY3-203ENST00000490393 SPANXA2-OT1Q8N9U9 137 aa7.58□□□□□ -1.2
RIPPLY3-203ENST00000490393 KIAA1109Q2LD37 5005 aa7.58□□□□□ -1.2
RIPPLY3-203ENST00000490393 LRP1Q07954 4544 aaKnown RBP7.57□□□□□ -1.2
RIPPLY3-203ENST00000490393 EPPK1P58107 5090 aaKnown RBP7.57□□□□□ -1.2
RIPPLY3-203ENST00000490393 CYP4F30PQ9H0H9 118 aa7.56□□□□□ -1.2
RIPPLY3-203ENST00000490393 LOC101927531A0A1B0GV80 90 aa7.55□□□□□ -1.2
RIPPLY3-203ENST00000490393 OXTP01178 125 aa7.53□□□□□ -1.2
RIPPLY3-203ENST00000490393 FLG2Q5D862 2391 aaPredicted RBP7.52□□□□□ -1.21
RIPPLY3-203ENST00000490393 IGLV7-46A0A075B6I9 117 aa7.51□□□□□ -1.21
RIPPLY3-203ENST00000490393 PCOTHQ58A44 107 aa7.47□□□□□ -1.21
RIPPLY3-203ENST00000490393 IGKV2-30P06310 120 aa7.46□□□□□ -1.22
RIPPLY3-203ENST00000490393 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
RIPPLY3-203ENST00000490393 RETNLBQ9BQ08 111 aa7.46□□□□□ -1.22
RIPPLY3-203ENST00000490393 A8MUU9 505 aa7.45□□□□□ -1.22
RIPPLY3-203ENST00000490393 MT1HL1P0DM35 61 aa7.45□□□□□ -1.22
RIPPLY3-203ENST00000490393 FP248Q71RG6 208 aaPredicted RBP7.45□□□□□ -1.22
RIPPLY3-203ENST00000490393 PRR4Q16378 134 aa7.44□□□□□ -1.22
RIPPLY3-203ENST00000490393 SMIM26A0A096LP01 95 aa7.43□□□□□ -1.22
RIPPLY3-203ENST00000490393 C9orf92A6NGG3 77 aa7.42□□□□□ -1.22
RIPPLY3-203ENST00000490393 MYCBP2O75592 4640 aa7.37□□□□□ -1.23
RIPPLY3-203ENST00000490393 Q75L30 129 aa7.37□□□□□ -1.23
RIPPLY3-203ENST00000490393 DMBT1Q9UGM3 2413 aaPredicted RBP7.37□□□□□ -1.23
RIPPLY3-203ENST00000490393 HRES1P13985 223 aa7.36□□□□□ -1.23
RIPPLY3-203ENST00000490393 IGKV2D-30A0A075B6S6 120 aa7.33□□□□□ -1.24
RIPPLY3-203ENST00000490393 C7orf65Q6ZTY9 151 aa7.32□□□□□ -1.24
RIPPLY3-203ENST00000490393 KRTAP4-5Q9BYR2 181 aa7.32□□□□□ -1.24
RIPPLY3-203ENST00000490393 COA5Q86WW8 74 aa7.31□□□□□ -1.24
RIPPLY3-203ENST00000490393 DMAC1Q96GE9 116 aa7.3□□□□□ -1.24
RIPPLY3-203ENST00000490393 ACYP2P14621 99 aa7.29□□□□□ -1.24
RIPPLY3-203ENST00000490393 BIRC6Q9NR09 4857 aa7.27□□□□□ -1.25
RIPPLY3-203ENST00000490393 Q1T7F1 81 aa7.26□□□□□ -1.25
RIPPLY3-203ENST00000490393 RPL37P61927 97 aaKnown RBP7.24□□□□□ -1.25
RIPPLY3-203ENST00000490393 C4orf26Q17RF5 130 aa7.24□□□□□ -1.25
RIPPLY3-203ENST00000490393 XP32Q5T750 250 aa7.24□□□□□ -1.25
RIPPLY3-203ENST00000490393 ATP11AUNQ6ZP68 121 aa7.23□□□□□ -1.25
RIPPLY3-203ENST00000490393 HERC2O95714 4834 aa7.22□□□□□ -1.25
RIPPLY3-203ENST00000490393 SPINK7P58062 85 aa7.21□□□□□ -1.25
RIPPLY3-203ENST00000490393 SEC61GP60059 68 aa7.21□□□□□ -1.25
RIPPLY3-203ENST00000490393 MPLKIPQ8TAP9 179 aa7.21□□□□□ -1.25
RIPPLY3-203ENST00000490393 V9GYY9 64 aa7.21□□□□□ -1.25
RIPPLY3-203ENST00000490393 TPRXLQ17RH7 258 aa7.19□□□□□ -1.26
RIPPLY3-203ENST00000490393 A8MUN3 132 aa7.19□□□□□ -1.26
RIPPLY3-203ENST00000490393 ABCA13Q86UQ4 5058 aa7.18□□□□□ -1.26
RIPPLY3-203ENST00000490393 CHKB-CPT1BH3BT56 60 aa7.13□□□□□ -1.27
RIPPLY3-203ENST00000490393 LCE2BO14633 110 aa7.12□□□□□ -1.27
RIPPLY3-203ENST00000490393 PRO0628Q9UI54 55 aa7.11□□□□□ -1.27
RIPPLY3-203ENST00000490393 LINC01558Q9Y6Z2 57 aa7.11□□□□□ -1.27
RIPPLY3-203ENST00000490393 KRTAP3-1Q9BYR8 98 aa7.1□□□□□ -1.27
RIPPLY3-203ENST00000490393 COX6B2Q6YFQ2 88 aa7.08□□□□□ -1.28
RIPPLY3-203ENST00000490393 PSPHP1O15172 72 aa7.05□□□□□ -1.28
RIPPLY3-203ENST00000490393 LRP2P98164 4655 aa7.05□□□□□ -1.28
RIPPLY3-203ENST00000490393 Q5VV11 94 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms