RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 HIST1H2BLQ99880 126 aa9.18□□□□□ -0.94
UPK3B-205ENST00000490360 A0A1B0GV72 72 aa9.17□□□□□ -0.94
UPK3B-205ENST00000490360 LYRM7Q5U5X0 104 aa9.17□□□□□ -0.94
UPK3B-205ENST00000490360 PRO1854Q9UHT4 67 aa9.17□□□□□ -0.94
UPK3B-205ENST00000490360 H1FX-AS1Q4G0G2 97 aa9.15□□□□□ -0.94
UPK3B-205ENST00000490360 DSCR8Q96T75 97 aa9.15□□□□□ -0.94
UPK3B-205ENST00000490360 HIGD1BQ9P298 99 aa9.15□□□□□ -0.94
UPK3B-205ENST00000490360 A6NN06 94 aa9.14□□□□□ -0.95
UPK3B-205ENST00000490360 C21orf62-AS1Q17RA5 79 aa9.14□□□□□ -0.95
UPK3B-205ENST00000490360 NDUFB1O75438 58 aa9.13□□□□□ -0.95
UPK3B-205ENST00000490360 TMEM238LA0A1B0GVL6 79 aa9.12□□□□□ -0.95
UPK3B-205ENST00000490360 A6NJY4 79 aa9.12□□□□□ -0.95
UPK3B-205ENST00000490360 TRIAP1O43715 76 aa9.12□□□□□ -0.95
UPK3B-205ENST00000490360 UBE2V1Q13404 147 aa9.1□□□□□ -0.95
UPK3B-205ENST00000490360 VPS25Q9BRG1 176 aa9.1□□□□□ -0.95
UPK3B-205ENST00000490360 S100A6P06703 90 aa9.08□□□□□ -0.96
UPK3B-205ENST00000490360 IGKV3D-7A0A0C4DH55 119 aa9.07□□□□□ -0.96
UPK3B-205ENST00000490360 CEND1Q8N111 149 aa9.07□□□□□ -0.96
UPK3B-205ENST00000490360 RBM3P98179 157 aaKnown RBP9.04□□□□□ -0.96
UPK3B-205ENST00000490360 C14orf144Q96I85 54 aa9.04□□□□□ -0.96
UPK3B-205ENST00000490360 C8orf17Q9NRJ1 99 aa9.03□□□□□ -0.96
UPK3B-205ENST00000490360 COX6CP09669 75 aa9.02□□□□□ -0.97
UPK3B-205ENST00000490360 KRTAP5-9P26371 169 aa9.02□□□□□ -0.97
UPK3B-205ENST00000490360 PSMB2P49721 201 aa9□□□□□ -0.97
UPK3B-205ENST00000490360 Q6ZQT0 140 aa8.99□□□□□ -0.97
UPK3B-205ENST00000490360 C2orf91Q6ZV80 131 aa8.99□□□□□ -0.97
UPK3B-205ENST00000490360 Q5VV11 94 aa8.98□□□□□ -0.97
UPK3B-205ENST00000490360 Q6ZVQ6 151 aa8.98□□□□□ -0.97
UPK3B-205ENST00000490360 FXYD2P54710 66 aa8.96□□□□□ -0.98
UPK3B-205ENST00000490360 C9JAW5 83 aa8.95□□□□□ -0.98
UPK3B-205ENST00000490360 MT1BP07438 61 aa8.94□□□□□ -0.98
UPK3B-205ENST00000490360 SPATA45Q537H7 98 aa8.93□□□□□ -0.98
UPK3B-205ENST00000490360 PAM16Q9Y3D7 125 aa8.93□□□□□ -0.98
UPK3B-205ENST00000490360 MDN1Q9NU22 5596 aa8.92□□□□□ -0.98
UPK3B-205ENST00000490360 KMT2DO14686 5537 aa8.92□□□□□ -0.98
UPK3B-205ENST00000490360 A0A1B0GW54 56 aa8.91□□□□□ -0.98
UPK3B-205ENST00000490360 KRTAP10-5P60370 271 aa8.91□□□□□ -0.98
UPK3B-205ENST00000490360 FAM236AA0A1B0GUQ0 79 aa8.9□□□□□ -0.98
UPK3B-205ENST00000490360 FAM236BA0A1B0GV22 79 aa8.9□□□□□ -0.98
UPK3B-205ENST00000490360 KRTAP2-3P0C7H8 128 aa8.89□□□□□ -0.99
UPK3B-205ENST00000490360 KRTAP19-8Q3LI54 63 aa8.89□□□□□ -0.99
UPK3B-205ENST00000490360 KRTAP2-4Q9BYR9 128 aa8.89□□□□□ -0.99
UPK3B-205ENST00000490360 TMEM254Q8TBM7 123 aa8.87□□□□□ -0.99
UPK3B-205ENST00000490360 MRPL34Q9BQ48 92 aaKnown RBP8.87□□□□□ -0.99
UPK3B-205ENST00000490360 VAMP8Q9BV40 100 aa8.87□□□□□ -0.99
UPK3B-205ENST00000490360 PRR15Q8IV56 129 aa8.86□□□□□ -0.99
UPK3B-205ENST00000490360 SPRR2GQ9BYE4 73 aa8.86□□□□□ -0.99
UPK3B-205ENST00000490360 C7orf65Q6ZTY9 151 aa8.83□□□□□ -1
UPK3B-205ENST00000490360 IGKV2D-30A0A075B6S6 120 aa8.82□□□□□ -1
UPK3B-205ENST00000490360 IGKV2-30P06310 120 aa8.82□□□□□ -1
UPK3B-205ENST00000490360 K7ERJ3 54 aa8.81□□□□□ -1
UPK3B-205ENST00000490360 BAALC-AS2P0C853 105 aa8.8□□□□□ -1
UPK3B-205ENST00000490360 MMP24-AS1A0A0U1RRL7 71 aa8.79□□□□□ -1
UPK3B-205ENST00000490360 NDUFS5O43920 106 aa8.79□□□□□ -1
UPK3B-205ENST00000490360 HSD52Q0P140 79 aa8.79□□□□□ -1
UPK3B-205ENST00000490360 TMA7Q9Y2S6 64 aaKnown RBP8.79□□□□□ -1
UPK3B-205ENST00000490360 SCGB1C2P0DMR2 95 aa8.78□□□□□ -1
UPK3B-205ENST00000490360 C5orf47Q569G3 176 aa8.78□□□□□ -1
UPK3B-205ENST00000490360 PDE6GP18545 87 aa8.77□□□□□ -1.01
UPK3B-205ENST00000490360 PYY3Q5JQD4 70 aa8.77□□□□□ -1.01
UPK3B-205ENST00000490360 hDV103S1A0JD37 113 aa8.76□□□□□ -1.01
UPK3B-205ENST00000490360 JMJD7-PLA2G4BH0Y9G9 81 aa8.76□□□□□ -1.01
UPK3B-205ENST00000490360 LOC110117498A0A087WWA1 95 aa8.75□□□□□ -1.01
UPK3B-205ENST00000490360 NREPQ16612 68 aa8.72□□□□□ -1.01
UPK3B-205ENST00000490360 C4orf26Q17RF5 130 aa8.72□□□□□ -1.01
UPK3B-205ENST00000490360 CSAG1Q6PB30 78 aa8.72□□□□□ -1.01
UPK3B-205ENST00000490360 Q5W150 140 aa8.68□□□□□ -1.02
UPK3B-205ENST00000490360 IMUPQ9GZP8 106 aa8.68□□□□□ -1.02
UPK3B-205ENST00000490360 S4R3F8 94 aa8.67□□□□□ -1.02
UPK3B-205ENST00000490360 KLKP1Q107X0 134 aa8.65□□□□□ -1.02
UPK3B-205ENST00000490360 K7EQZ3 153 aa8.63□□□□□ -1.03
UPK3B-205ENST00000490360 ATXN8Q156A1 80 aa8.61□□□□□ -1.03
UPK3B-205ENST00000490360 SPRR2EP22531 72 aa8.6□□□□□ -1.03
UPK3B-205ENST00000490360 SPRR2BP35325 72 aa8.6□□□□□ -1.03
UPK3B-205ENST00000490360 SPRR2AP35326 72 aa8.6□□□□□ -1.03
UPK3B-205ENST00000490360 SPRR2FQ96RM1 72 aa8.59□□□□□ -1.03
UPK3B-205ENST00000490360 C14orf132Q9NPU4 83 aa8.59□□□□□ -1.03
UPK3B-205ENST00000490360 LCA10Q71F78 164 aa8.57□□□□□ -1.04
UPK3B-205ENST00000490360 KRTAP2-2Q9BYT5 123 aa8.57□□□□□ -1.04
UPK3B-205ENST00000490360 KRTAP2-1Q9BYU5 128 aa8.57□□□□□ -1.04
UPK3B-205ENST00000490360 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
UPK3B-205ENST00000490360 UQCR10Q9UDW1 63 aa8.57□□□□□ -1.04
UPK3B-205ENST00000490360 KRTAP3-1Q9BYR8 98 aa8.55□□□□□ -1.04
UPK3B-205ENST00000490360 SMCPP49901 116 aaPredicted RBP8.54□□□□□ -1.04
UPK3B-205ENST00000490360 CXCL6P80162 114 aa8.54□□□□□ -1.04
UPK3B-205ENST00000490360 HCG22E2RYF7 251 aa8.52□□□□□ -1.05
UPK3B-205ENST00000490360 CASC2Q6XLA1 102 aa8.51□□□□□ -1.05
UPK3B-205ENST00000490360 C1orf64Q8NEQ6 169 aa8.51□□□□□ -1.05
UPK3B-205ENST00000490360 BPY2O14599 106 aa8.5□□□□□ -1.05
UPK3B-205ENST00000490360 PRO2289Q9P1D8 64 aa8.43□□□□□ -1.06
UPK3B-205ENST00000490360 LCE1AQ5T7P2 110 aa8.4□□□□□ -1.06
UPK3B-205ENST00000490360 SMIM6P0DI80 62 aa8.38□□□□□ -1.07
UPK3B-205ENST00000490360 KRTAP8-1Q8IUC2 63 aa8.38□□□□□ -1.07
UPK3B-205ENST00000490360 NAA38Q9BRA0 125 aaKnown RBP8.38□□□□□ -1.07
UPK3B-205ENST00000490360 Q8N9L7 120 aa8.36□□□□□ -1.07
UPK3B-205ENST00000490360 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
UPK3B-205ENST00000490360 SPRR2DP22532 72 aa8.33□□□□□ -1.08
UPK3B-205ENST00000490360 LOC105371267A0A1B0GV96 52 aa8.32□□□□□ -1.08
UPK3B-205ENST00000490360 M0R143 59 aa8.32□□□□□ -1.08
UPK3B-205ENST00000490360 MT1XP80297 61 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms