RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 SPRR2AP35326 72 aa0.13□□□□□ -2.39
CCDC39-206ENST00000489868 KRTAP6-2Q3LI66 62 aa0.13□□□□□ -2.39
CCDC39-206ENST00000489868 ABCA12Q86UK0 2595 aa0.13□□□□□ -2.39
CCDC39-206ENST00000489868 AKAP13Q12802 2813 aa0.13□□□□□ -2.39
CCDC39-206ENST00000489868 DSPP15924 2871 aaKnown RBP0.12□□□□□ -2.39
CCDC39-206ENST00000489868 POLQO75417 2590 aa0.12□□□□□ -2.39
CCDC39-206ENST00000489868 F8P00451 2351 aa0.12□□□□□ -2.39
CCDC39-206ENST00000489868 HECTD1Q9ULT8 2610 aa0.12□□□□□ -2.39
CCDC39-206ENST00000489868 A0A096LPF7 62 aa0.12□□□□□ -2.39
CCDC39-206ENST00000489868 DEFB133Q30KQ1 61 aa0.12□□□□□ -2.39
CCDC39-206ENST00000489868 KRTAP19-5Q3LI72 72 aa0.12□□□□□ -2.39
CCDC39-206ENST00000489868 IGF2RP11717 2491 aa0.12□□□□□ -2.39
CCDC39-206ENST00000489868 TRANK1O15050 2925 aa0.12□□□□□ -2.39
CCDC39-206ENST00000489868 PKDREJQ9NTG1 2253 aa0.12□□□□□ -2.39
CCDC39-206ENST00000489868 AKAP6Q13023 2319 aa0.12□□□□□ -2.39
CCDC39-206ENST00000489868 KNL1Q8NG31 2342 aa0.12□□□□□ -2.39
CCDC39-206ENST00000489868 PKD1L2Q7Z442 2459 aa0.11□□□□□ -2.39
CCDC39-206ENST00000489868 GVINP1Q7Z2Y8 2422 aa0.11□□□□□ -2.39
CCDC39-206ENST00000489868 SPRR2EP22531 72 aa0.11□□□□□ -2.39
CCDC39-206ENST00000489868 RPS29P62273 56 aaKnown RBP0.11□□□□□ -2.39
CCDC39-206ENST00000489868 DEFB108BQ8NET1 73 aa0.11□□□□□ -2.39
CCDC39-206ENST00000489868 SPRR2FQ96RM1 72 aa0.11□□□□□ -2.39
CCDC39-206ENST00000489868 PDE4DIPQ5VU43 2346 aa0.11□□□□□ -2.39
CCDC39-206ENST00000489868 TNXBP22105 4242 aa0.11□□□□□ -2.39
CCDC39-206ENST00000489868 BDP1A6H8Y1 2624 aa0.11□□□□□ -2.39
CCDC39-206ENST00000489868 NCOR1O75376 2440 aa0.11□□□□□ -2.39
CCDC39-206ENST00000489868 CREBBPQ92793 2442 aa0.11□□□□□ -2.39
CCDC39-206ENST00000489868 STAB1Q9NY15 2570 aa0.1□□□□□ -2.39
CCDC39-206ENST00000489868 WNK1Q9H4A3 2382 aa0.1□□□□□ -2.39
CCDC39-206ENST00000489868 CELSR1Q9NYQ6 3014 aa0.1□□□□□ -2.39
CCDC39-206ENST00000489868 CD52P31358 61 aa0.1□□□□□ -2.39
CCDC39-206ENST00000489868 LINC01556Q5JQF7 62 aa0.1□□□□□ -2.39
CCDC39-206ENST00000489868 Q9Y3F1 56 aa0.1□□□□□ -2.39
CCDC39-206ENST00000489868 HIVEP3Q5T1R4 2406 aa0.1□□□□□ -2.39
CCDC39-206ENST00000489868 TRIOO75962 3097 aa0.1□□□□□ -2.39
CCDC39-206ENST00000489868 TNRC18O15417 2968 aaPredicted RBP0.1□□□□□ -2.39
CCDC39-206ENST00000489868 ZNF292O60281 2723 aa0.1□□□□□ -2.39
CCDC39-206ENST00000489868 CHD9Q3L8U1 2897 aa0.1□□□□□ -2.39
CCDC39-206ENST00000489868 CUBNO60494 3623 aa0.09□□□□□ -2.39
CCDC39-206ENST00000489868 DMBT1Q9UGM3 2413 aaPredicted RBP0.09□□□□□ -2.39
CCDC39-206ENST00000489868 CSPG4Q6UVK1 2322 aa0.09□□□□□ -2.39
CCDC39-206ENST00000489868 PRRC2CQ9Y520 2896 aaKnown RBP0.09□□□□□ -2.39
CCDC39-206ENST00000489868 RANBP2P49792 3224 aaKnown RBP0.09□□□□□ -2.39
CCDC39-206ENST00000489868 DEFB4AO15263 64 aa0.09□□□□□ -2.4
CCDC39-206ENST00000489868 COX14Q96I36 57 aa0.09□□□□□ -2.4
CCDC39-206ENST00000489868 MAP1BP46821 2468 aaKnown RBP0.09□□□□□ -2.4
CCDC39-206ENST00000489868 PTPN13Q12923 2485 aa0.09□□□□□ -2.4
CCDC39-206ENST00000489868 VWFP04275 2813 aa0.09□□□□□ -2.4
CCDC39-206ENST00000489868 CHD6Q8TD26 2715 aa0.08□□□□□ -2.4
CCDC39-206ENST00000489868 SONP18583 2426 aaKnown RBP0.08□□□□□ -2.4
CCDC39-206ENST00000489868 ATRQ13535 2644 aa0.08□□□□□ -2.4
CCDC39-206ENST00000489868 CACNA1AO00555 2505 aa0.08□□□□□ -2.4
CCDC39-206ENST00000489868 NBASA2RRP1 2371 aa0.08□□□□□ -2.4
CCDC39-206ENST00000489868 MT1EP04732 61 aa0.08□□□□□ -2.4
CCDC39-206ENST00000489868 HTN3P15516 51 aa0.08□□□□□ -2.4
CCDC39-206ENST00000489868 ALMS1Q8TCU4 4167 aa0.08□□□□□ -2.4
CCDC39-206ENST00000489868 CHD8Q9HCK8 2581 aa0.08□□□□□ -2.4
CCDC39-206ENST00000489868 OTOGQ6ZRI0 2925 aa0.08□□□□□ -2.4
CCDC39-206ENST00000489868 CEP290O15078 2479 aa0.08□□□□□ -2.4
CCDC39-206ENST00000489868 APC2O95996 2303 aa0.08□□□□□ -2.4
CCDC39-206ENST00000489868 SPTBN4Q9H254 2564 aa0.07□□□□□ -2.4
CCDC39-206ENST00000489868 ACANP16112 2415 aa0.07□□□□□ -2.4
CCDC39-206ENST00000489868 UBR5O95071 2799 aaPredicted RBP0.07□□□□□ -2.4
CCDC39-206ENST00000489868 MTORP42345 2549 aa0.07□□□□□ -2.4
CCDC39-206ENST00000489868 MT1HP80294 61 aa0.07□□□□□ -2.4
CCDC39-206ENST00000489868 SETD2Q9BYW2 2564 aaPredicted RBP0.07□□□□□ -2.4
CCDC39-206ENST00000489868 NSD1Q96L73 2696 aaPredicted RBP0.07□□□□□ -2.4
CCDC39-206ENST00000489868 HRNRQ86YZ3 2850 aaPredicted RBP0.07□□□□□ -2.4
CCDC39-206ENST00000489868 COL12A1Q99715 3063 aa0.07□□□□□ -2.4
CCDC39-206ENST00000489868 ZFYVE26Q68DK2 2539 aa0.07□□□□□ -2.4
CCDC39-206ENST00000489868 SVEP1Q4LDE5 3571 aa0.06□□□□□ -2.4
CCDC39-206ENST00000489868 UNC79Q9P2D8 2635 aa0.06□□□□□ -2.4
CCDC39-206ENST00000489868 SPTA1P02549 2419 aa0.06□□□□□ -2.4
CCDC39-206ENST00000489868 A0A0C4DFX4 3053 aa0.06□□□□□ -2.4
CCDC39-206ENST00000489868 ANKHD1Q8IWZ3 2542 aaKnown RBP0.06□□□□□ -2.4
CCDC39-206ENST00000489868 ACACAQ13085 2346 aa0.06□□□□□ -2.4
CCDC39-206ENST00000489868 CRYBG3Q68DQ2 2970 aa0.06□□□□□ -2.4
CCDC39-206ENST00000489868 MT1LQ93083 61 aa0.06□□□□□ -2.4
CCDC39-206ENST00000489868 LAMA5O15230 3695 aa0.06□□□□□ -2.4
CCDC39-206ENST00000489868 COL6A5A8TX70 2615 aa0.06□□□□□ -2.4
CCDC39-206ENST00000489868 GCN1Q92616 2671 aaKnown RBP0.06□□□□□ -2.4
CCDC39-206ENST00000489868 ZFHX4Q86UP3 3567 aa0.06□□□□□ -2.4
CCDC39-206ENST00000489868 CCDC168Q8NDH2 2452 aa0.06□□□□□ -2.4
CCDC39-206ENST00000489868 FLNCQ14315 2725 aa0.06□□□□□ -2.4
CCDC39-206ENST00000489868 UTP20O75691 2785 aaKnown RBP0.06□□□□□ -2.4
CCDC39-206ENST00000489868 SETXQ7Z333 2677 aaKnown RBP0.05□□□□□ -2.4
CCDC39-206ENST00000489868 DMXL1Q9Y485 3027 aa0.05□□□□□ -2.4
CCDC39-206ENST00000489868 NCOR2Q9Y618 2525 aa0.05□□□□□ -2.4
CCDC39-206ENST00000489868 MT1GP13640 62 aa0.05□□□□□ -2.4
CCDC39-206ENST00000489868 MT1XP80297 61 aa0.05□□□□□ -2.4
CCDC39-206ENST00000489868 KRTAP19-8Q3LI54 63 aa0.05□□□□□ -2.4
CCDC39-206ENST00000489868 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
CCDC39-206ENST00000489868 LAMA1P25391 3075 aa0.05□□□□□ -2.4
CCDC39-206ENST00000489868 NF1P21359 2839 aa0.05□□□□□ -2.4
CCDC39-206ENST00000489868 FLNBO75369 2602 aaKnown RBP0.05□□□□□ -2.4
CCDC39-206ENST00000489868 ANK2Q01484 3957 aa0.05□□□□□ -2.4
CCDC39-206ENST00000489868 COL7A1Q02388 2944 aa0.05□□□□□ -2.4
CCDC39-206ENST00000489868 RELNP78509 3460 aa0.05□□□□□ -2.4
CCDC39-206ENST00000489868 ACACBO00763 2458 aa0.05□□□□□ -2.4
CCDC39-206ENST00000489868 CSMD1Q96PZ7 3565 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms