RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 KRTAP9-4Q9BYQ2 154 aa8.14□□□□□ -1.11
VPS26A-205ENST00000489656 Q96NJ1 140 aa8.13□□□□□ -1.11
VPS26A-205ENST00000489656 BPY2O14599 106 aa8.11□□□□□ -1.11
VPS26A-205ENST00000489656 MT1HL1P0DM35 61 aa8.11□□□□□ -1.11
VPS26A-205ENST00000489656 J3KT08 172 aa8.1□□□□□ -1.11
VPS26A-205ENST00000489656 MT-ATP8P03928 68 aa8.1□□□□□ -1.11
VPS26A-205ENST00000489656 SIGMAR1Q99720 223 aa8.1□□□□□ -1.11
VPS26A-205ENST00000489656 IGKV3D-7A0A0C4DH55 119 aa8.09□□□□□ -1.11
VPS26A-205ENST00000489656 KRTAP29-1A8MX34 341 aaPredicted RBP8.09□□□□□ -1.11
VPS26A-205ENST00000489656 ABCA13Q86UQ4 5058 aa8.08□□□□□ -1.12
VPS26A-205ENST00000489656 IMUPQ9GZP8 106 aa8.08□□□□□ -1.12
VPS26A-205ENST00000489656 DSCR10P59022 87 aa8.07□□□□□ -1.12
VPS26A-205ENST00000489656 DEFB116Q30KQ4 102 aa8.06□□□□□ -1.12
VPS26A-205ENST00000489656 C1orf195Q5TG92 126 aa8.06□□□□□ -1.12
VPS26A-205ENST00000489656 A8MWP4 228 aa8.04□□□□□ -1.12
VPS26A-205ENST00000489656 IGKV4-1P06312 121 aa8.04□□□□□ -1.12
VPS26A-205ENST00000489656 DMBT1Q9UGM3 2413 aaPredicted RBP8.02□□□□□ -1.13
VPS26A-205ENST00000489656 K7EQZ3 153 aa8□□□□□ -1.13
VPS26A-205ENST00000489656 PRR15Q8IV56 129 aa8□□□□□ -1.13
VPS26A-205ENST00000489656 NDUFB1O75438 58 aa7.99□□□□□ -1.13
VPS26A-205ENST00000489656 HIST1H4AP62805 103 aaKnown RBP7.99□□□□□ -1.13
VPS26A-205ENST00000489656 Q8N9L7 120 aa7.99□□□□□ -1.13
VPS26A-205ENST00000489656 A0A1B0GVX0 72 aa7.97□□□□□ -1.13
VPS26A-205ENST00000489656 A0A087WVE0 104 aa7.95□□□□□ -1.14
VPS26A-205ENST00000489656 KRTAP4-8A0A0G2JLE6 195 aa7.94□□□□□ -1.14
VPS26A-205ENST00000489656 C8orf87E5RJ46 101 aa7.92□□□□□ -1.14
VPS26A-205ENST00000489656 FP248Q71RG6 208 aaPredicted RBP7.92□□□□□ -1.14
VPS26A-205ENST00000489656 IGHV6-1A0A0B4J1U7 121 aa7.91□□□□□ -1.14
VPS26A-205ENST00000489656 HCG22E2RYF7 251 aa7.91□□□□□ -1.14
VPS26A-205ENST00000489656 RETNLBQ9BQ08 111 aa7.91□□□□□ -1.14
VPS26A-205ENST00000489656 C8orf17Q9NRJ1 99 aa7.91□□□□□ -1.14
VPS26A-205ENST00000489656 MMP24-AS1A0A0U1RRL7 71 aa7.9□□□□□ -1.14
VPS26A-205ENST00000489656 SCGB1A1P11684 91 aa7.9□□□□□ -1.14
VPS26A-205ENST00000489656 FAM236AA0A1B0GUQ0 79 aa7.88□□□□□ -1.15
VPS26A-205ENST00000489656 FAM236BA0A1B0GV22 79 aa7.88□□□□□ -1.15
VPS26A-205ENST00000489656 LINC00313P59037 77 aa7.86□□□□□ -1.15
VPS26A-205ENST00000489656 CASC2Q6XLA1 102 aa7.86□□□□□ -1.15
VPS26A-205ENST00000489656 NOTCH2NLQ7Z3S9 236 aa7.86□□□□□ -1.15
VPS26A-205ENST00000489656 hDV103S1A0JD37 113 aa7.85□□□□□ -1.15
VPS26A-205ENST00000489656 TMEM254Q8TBM7 123 aa7.85□□□□□ -1.15
VPS26A-205ENST00000489656 PCLOQ9Y6V0 5065 aa7.84□□□□□ -1.15
VPS26A-205ENST00000489656 WFDC13Q8IUB5 93 aa7.84□□□□□ -1.15
VPS26A-205ENST00000489656 IGLV7-46A0A075B6I9 117 aa7.81□□□□□ -1.16
VPS26A-205ENST00000489656 KRTAP16-1A8MUX0 517 aa7.81□□□□□ -1.16
VPS26A-205ENST00000489656 ATOX1O00244 68 aa7.81□□□□□ -1.16
VPS26A-205ENST00000489656 MRPL34Q9BQ48 92 aaKnown RBP7.81□□□□□ -1.16
VPS26A-205ENST00000489656 SMIM20Q8N5G0 67 aa7.77□□□□□ -1.17
VPS26A-205ENST00000489656 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.17
VPS26A-205ENST00000489656 PRR4Q16378 134 aa7.76□□□□□ -1.17
VPS26A-205ENST00000489656 KRTAP13-3Q3SY46 172 aa7.76□□□□□ -1.17
VPS26A-205ENST00000489656 LCE1DQ5T752 114 aa7.76□□□□□ -1.17
VPS26A-205ENST00000489656 OCR1Q9BZK8 76 aa7.76□□□□□ -1.17
VPS26A-205ENST00000489656 C9orf92A6NGG3 77 aa7.75□□□□□ -1.17
VPS26A-205ENST00000489656 TPRXLQ17RH7 258 aa7.74□□□□□ -1.17
VPS26A-205ENST00000489656 KRTAP19-4Q3LI73 84 aa7.74□□□□□ -1.17
VPS26A-205ENST00000489656 TRAV7A0A075B6U4 112 aa7.73□□□□□ -1.17
VPS26A-205ENST00000489656 TP53AIP1Q9HCN2 124 aa7.73□□□□□ -1.17
VPS26A-205ENST00000489656 LCE4AQ5TA78 99 aa7.72□□□□□ -1.17
VPS26A-205ENST00000489656 C20orf166-AS1Q96NR2 134 aa7.72□□□□□ -1.17
VPS26A-205ENST00000489656 A8MUU9 505 aa7.71□□□□□ -1.18
VPS26A-205ENST00000489656 SERP2Q8N6R1 65 aa7.71□□□□□ -1.18
VPS26A-205ENST00000489656 ANAPC13Q9BS18 74 aa7.7□□□□□ -1.18
VPS26A-205ENST00000489656 UQCRQO14949 82 aa7.69□□□□□ -1.18
VPS26A-205ENST00000489656 NDUFS5O43920 106 aa7.69□□□□□ -1.18
VPS26A-205ENST00000489656 Q75L30 129 aa7.68□□□□□ -1.18
VPS26A-205ENST00000489656 LPAP08519 4548 aa7.65□□□□□ -1.18
VPS26A-205ENST00000489656 HERC1Q15751 4861 aa7.65□□□□□ -1.18
VPS26A-205ENST00000489656 KRTAP4-7Q9BYR0 210 aa7.65□□□□□ -1.18
VPS26A-205ENST00000489656 COX7CP15954 63 aa7.64□□□□□ -1.19
VPS26A-205ENST00000489656 C5orf47Q569G3 176 aa7.63□□□□□ -1.19
VPS26A-205ENST00000489656 TRAV22A0A0B4J277 110 aa7.62□□□□□ -1.19
VPS26A-205ENST00000489656 RPL37P61927 97 aaKnown RBP7.62□□□□□ -1.19
VPS26A-205ENST00000489656 LRP2P98164 4655 aa7.6□□□□□ -1.19
VPS26A-205ENST00000489656 Q5W150 140 aa7.6□□□□□ -1.19
VPS26A-205ENST00000489656 ZCCHC13Q8WW36 166 aaKnown RBP7.6□□□□□ -1.19
VPS26A-205ENST00000489656 H0Y9P7 68 aa7.59□□□□□ -1.19
VPS26A-205ENST00000489656 H3BPC8 53 aa7.58□□□□□ -1.2
VPS26A-205ENST00000489656 MP68P56378 58 aa7.58□□□□□ -1.2
VPS26A-205ENST00000489656 HMCN2Q8NDA2 5059 aa7.58□□□□□ -1.2
VPS26A-205ENST00000489656 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
VPS26A-205ENST00000489656 PCP4P48539 62 aa7.56□□□□□ -1.2
VPS26A-205ENST00000489656 MUC17Q685J3 4493 aa7.55□□□□□ -1.2
VPS26A-205ENST00000489656 A0A0U1RQV1 116 aa7.54□□□□□ -1.2
VPS26A-205ENST00000489656 ATP11AUNQ6ZP68 121 aa7.54□□□□□ -1.2
VPS26A-205ENST00000489656 CCDC179H3BU77 68 aa7.53□□□□□ -1.2
VPS26A-205ENST00000489656 KLKP1Q107X0 134 aa7.53□□□□□ -1.2
VPS26A-205ENST00000489656 C20orf197Q8N268 126 aa7.53□□□□□ -1.2
VPS26A-205ENST00000489656 LINC00208Q96KT6 92 aa7.52□□□□□ -1.21
VPS26A-205ENST00000489656 LOC101927531A0A1B0GV80 90 aa7.51□□□□□ -1.21
VPS26A-205ENST00000489656 C1orf64Q8NEQ6 169 aa7.51□□□□□ -1.21
VPS26A-205ENST00000489656 KRTAP4-9Q9BYQ8 210 aa7.51□□□□□ -1.21
VPS26A-205ENST00000489656 IGKV2-30P06310 120 aa7.49□□□□□ -1.21
VPS26A-205ENST00000489656 SNURFQ9Y675 71 aa7.48□□□□□ -1.21
VPS26A-205ENST00000489656 SEC61BP60468 96 aaKnown RBP7.46□□□□□ -1.22
VPS26A-205ENST00000489656 CYP4F30PQ9H0H9 118 aa7.46□□□□□ -1.22
VPS26A-205ENST00000489656 PCOTHQ58A44 107 aa7.45□□□□□ -1.22
VPS26A-205ENST00000489656 C7orf65Q6ZTY9 151 aa7.44□□□□□ -1.22
VPS26A-205ENST00000489656 IGKV2D-30A0A075B6S6 120 aa7.43□□□□□ -1.22
VPS26A-205ENST00000489656 NDUFC1O43677 76 aa7.43□□□□□ -1.22
VPS26A-205ENST00000489656 CYSTM1Q9H1C7 97 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms