RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 CDK2AP2O75956 126 aa4.59□□□□□ -1.67
SMC6-209ENST00000489535 FAT1Q14517 4588 aa4.59□□□□□ -1.68
SMC6-209ENST00000489535 KRTAP10-4P60372 401 aaPredicted RBP4.58□□□□□ -1.68
SMC6-209ENST00000489535 UBL5Q9BZL1 73 aa4.58□□□□□ -1.68
SMC6-209ENST00000489535 MT-ATP8P03928 68 aa4.57□□□□□ -1.68
SMC6-209ENST00000489535 FAM229BQ4G0N7 80 aa4.57□□□□□ -1.68
SMC6-209ENST00000489535 A0A087X002 238 aa4.56□□□□□ -1.68
SMC6-209ENST00000489535 A0A1B0GW54 56 aa4.56□□□□□ -1.68
SMC6-209ENST00000489535 KRTAP1-4P0C5Y4 121 aa4.56□□□□□ -1.68
SMC6-209ENST00000489535 CRYGAP11844 174 aa4.56□□□□□ -1.68
SMC6-209ENST00000489535 Q6Q795 121 aa4.56□□□□□ -1.68
SMC6-209ENST00000489535 Q6ZVQ6 151 aa4.56□□□□□ -1.68
SMC6-209ENST00000489535 LINC00643Q86TS7 51 aa4.56□□□□□ -1.68
SMC6-209ENST00000489535 SIGMAR1Q99720 223 aa4.56□□□□□ -1.68
SMC6-209ENST00000489535 NREPQ16612 68 aa4.55□□□□□ -1.68
SMC6-209ENST00000489535 KRTAP13-2Q52LG2 175 aa4.55□□□□□ -1.68
SMC6-209ENST00000489535 Q5VSD8 79 aa4.55□□□□□ -1.68
SMC6-209ENST00000489535 HRCT1Q6UXD1 115 aa4.55□□□□□ -1.68
SMC6-209ENST00000489535 A0A087WSZ3 146 aa4.54□□□□□ -1.68
SMC6-209ENST00000489535 IGKV3D-7A0A0C4DH55 119 aa4.54□□□□□ -1.68
SMC6-209ENST00000489535 TRBV7-7A0A0K0K1E9 115 aa4.54□□□□□ -1.68
SMC6-209ENST00000489535 SSBP3-AS1Q7Z2R9 100 aa4.54□□□□□ -1.68
SMC6-209ENST00000489535 SVIPQ8NHG7 77 aa4.54□□□□□ -1.68
SMC6-209ENST00000489535 ATP5EP2Q5VTU8 51 aa4.52□□□□□ -1.69
SMC6-209ENST00000489535 TYMSOSQ8TAI1 123 aa4.51□□□□□ -1.69
SMC6-209ENST00000489535 FAT3Q8TDW7 4589 aa4.51□□□□□ -1.69
SMC6-209ENST00000489535 KIAA1109Q2LD37 5005 aa4.51□□□□□ -1.69
SMC6-209ENST00000489535 BPY2O14599 106 aa4.5□□□□□ -1.69
SMC6-209ENST00000489535 CD164Q04900 197 aa4.5□□□□□ -1.69
SMC6-209ENST00000489535 PRR26Q8N8Z3 221 aa4.5□□□□□ -1.69
SMC6-209ENST00000489535 SS18L2Q9UHA2 77 aa4.5□□□□□ -1.69
SMC6-209ENST00000489535 HIST1H4AP62805 103 aaKnown RBP4.49□□□□□ -1.69
SMC6-209ENST00000489535 CXCL6P80162 114 aa4.49□□□□□ -1.69
SMC6-209ENST00000489535 DEFB116Q30KQ4 102 aa4.49□□□□□ -1.69
SMC6-209ENST00000489535 IMUPQ9GZP8 106 aa4.48□□□□□ -1.69
SMC6-209ENST00000489535 BIRC6Q9NR09 4857 aa4.47□□□□□ -1.69
SMC6-209ENST00000489535 TNXBP22105 4242 aa4.47□□□□□ -1.69
SMC6-209ENST00000489535 A0A087WVE0 104 aa4.46□□□□□ -1.7
SMC6-209ENST00000489535 Q8N9L7 120 aa4.46□□□□□ -1.7
SMC6-209ENST00000489535 LINC00304Q8N9R0 145 aa4.46□□□□□ -1.7
SMC6-209ENST00000489535 Q96NJ1 140 aa4.46□□□□□ -1.7
SMC6-209ENST00000489535 LINC00472Q9H8W2 130 aa4.46□□□□□ -1.7
SMC6-209ENST00000489535 IGKV4-1P06312 121 aa4.45□□□□□ -1.7
SMC6-209ENST00000489535 DSCR10P59022 87 aa4.45□□□□□ -1.7
SMC6-209ENST00000489535 LIMD2Q9BT23 127 aa4.45□□□□□ -1.7
SMC6-209ENST00000489535 FAM236AA0A1B0GUQ0 79 aa4.44□□□□□ -1.7
SMC6-209ENST00000489535 FAM236BA0A1B0GV22 79 aa4.44□□□□□ -1.7
SMC6-209ENST00000489535 J3KT08 172 aa4.44□□□□□ -1.7
SMC6-209ENST00000489535 K7EQZ3 153 aa4.44□□□□□ -1.7
SMC6-209ENST00000489535 LRP1Q07954 4544 aaKnown RBP4.43□□□□□ -1.7
SMC6-209ENST00000489535 SPINK1P00995 79 aa4.43□□□□□ -1.7
SMC6-209ENST00000489535 ASB16-AS1Q495Z4 193 aa4.43□□□□□ -1.7
SMC6-209ENST00000489535 SPAG11AQ6PDA7 123 aa4.43□□□□□ -1.7
SMC6-209ENST00000489535 A8MWP4 228 aa4.42□□□□□ -1.7
SMC6-209ENST00000489535 Q5XG85 94 aa4.42□□□□□ -1.7
SMC6-209ENST00000489535 RPS29P62273 56 aaKnown RBP4.41□□□□□ -1.7
SMC6-209ENST00000489535 NDUFB1O75438 58 aa4.4□□□□□ -1.71
SMC6-209ENST00000489535 KRTAP10-8P60410 259 aa4.4□□□□□ -1.71
SMC6-209ENST00000489535 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.71
SMC6-209ENST00000489535 C1orf195Q5TG92 126 aa4.4□□□□□ -1.71
SMC6-209ENST00000489535 A0A1B0GVX0 72 aa4.39□□□□□ -1.71
SMC6-209ENST00000489535 PRR15Q8IV56 129 aa4.39□□□□□ -1.71
SMC6-209ENST00000489535 HERC2O95714 4834 aa4.38□□□□□ -1.71
SMC6-209ENST00000489535 IGHV6-1A0A0B4J1U7 121 aa4.38□□□□□ -1.71
SMC6-209ENST00000489535 HCG22E2RYF7 251 aa4.38□□□□□ -1.71
SMC6-209ENST00000489535 WFDC13Q8IUB5 93 aa4.38□□□□□ -1.71
SMC6-209ENST00000489535 ANAPC13Q9BS18 74 aa4.38□□□□□ -1.71
SMC6-209ENST00000489535 ATOX1O00244 68 aa4.37□□□□□ -1.71
SMC6-209ENST00000489535 FLG2Q5D862 2391 aaPredicted RBP4.36□□□□□ -1.71
SMC6-209ENST00000489535 MMP24-AS1A0A0U1RRL7 71 aa4.36□□□□□ -1.71
SMC6-209ENST00000489535 CASC2Q6XLA1 102 aa4.36□□□□□ -1.71
SMC6-209ENST00000489535 C8orf17Q9NRJ1 99 aa4.36□□□□□ -1.71
SMC6-209ENST00000489535 ABCA13Q86UQ4 5058 aa4.35□□□□□ -1.71
SMC6-209ENST00000489535 hDV103S1A0JD37 113 aa4.34□□□□□ -1.71
SMC6-209ENST00000489535 OXTP01178 125 aa4.34□□□□□ -1.71
SMC6-209ENST00000489535 MT1HL1P0DM35 61 aa4.34□□□□□ -1.71
SMC6-209ENST00000489535 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
SMC6-209ENST00000489535 C8orf87E5RJ46 101 aa4.33□□□□□ -1.72
SMC6-209ENST00000489535 NOTCH2NLQ7Z3S9 236 aa4.33□□□□□ -1.72
SMC6-209ENST00000489535 RETNLBQ9BQ08 111 aa4.33□□□□□ -1.72
SMC6-209ENST00000489535 LINC00313P59037 77 aa4.32□□□□□ -1.72
SMC6-209ENST00000489535 SMIM20Q8N5G0 67 aa4.32□□□□□ -1.72
SMC6-209ENST00000489535 TMEM254Q8TBM7 123 aa4.32□□□□□ -1.72
SMC6-209ENST00000489535 TRAV7A0A075B6U4 112 aa4.31□□□□□ -1.72
SMC6-209ENST00000489535 SERP2Q8N6R1 65 aa4.31□□□□□ -1.72
SMC6-209ENST00000489535 MRPL34Q9BQ48 92 aaKnown RBP4.31□□□□□ -1.72
SMC6-209ENST00000489535 COX7CP15954 63 aa4.3□□□□□ -1.72
SMC6-209ENST00000489535 NDUFS5O43920 106 aa4.29□□□□□ -1.72
SMC6-209ENST00000489535 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
SMC6-209ENST00000489535 OCR1Q9BZK8 76 aa4.29□□□□□ -1.72
SMC6-209ENST00000489535 KRTAP16-1A8MUX0 517 aa4.27□□□□□ -1.73
SMC6-209ENST00000489535 CCDC179H3BU77 68 aa4.27□□□□□ -1.73
SMC6-209ENST00000489535 UQCRQO14949 82 aa4.27□□□□□ -1.73
SMC6-209ENST00000489535 C9orf92A6NGG3 77 aa4.26□□□□□ -1.73
SMC6-209ENST00000489535 FP248Q71RG6 208 aaPredicted RBP4.26□□□□□ -1.73
SMC6-209ENST00000489535 DMBT1Q9UGM3 2413 aaPredicted RBP4.26□□□□□ -1.73
SMC6-209ENST00000489535 TP53AIP1Q9HCN2 124 aa4.25□□□□□ -1.73
SMC6-209ENST00000489535 IGLV7-46A0A075B6I9 117 aa4.23□□□□□ -1.73
SMC6-209ENST00000489535 H0Y9P7 68 aa4.23□□□□□ -1.73
SMC6-209ENST00000489535 PRR4Q16378 134 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms