RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 TMEM258P61165 79 aa8.19□□□□□ -1.1
CLDN11-209ENST00000489485 Q6ZVQ6 151 aa8.19□□□□□ -1.1
CLDN11-209ENST00000489485 CD164Q04900 197 aa8.19□□□□□ -1.1
CLDN11-209ENST00000489485 HERC1Q15751 4861 aa8.16□□□□□ -1.1
CLDN11-209ENST00000489485 A0A087WSZ3 146 aa8.16□□□□□ -1.1
CLDN11-209ENST00000489485 RPS29P62273 56 aaKnown RBP8.15□□□□□ -1.1
CLDN11-209ENST00000489485 C4orf26Q17RF5 130 aa8.15□□□□□ -1.1
CLDN11-209ENST00000489485 LIMD2Q9BT23 127 aa8.14□□□□□ -1.11
CLDN11-209ENST00000489485 TRAV7A0A075B6U4 112 aa8.13□□□□□ -1.11
CLDN11-209ENST00000489485 RETNLBQ9BQ08 111 aa8.13□□□□□ -1.11
CLDN11-209ENST00000489485 A0A1B0GW54 56 aa8.11□□□□□ -1.11
CLDN11-209ENST00000489485 C1orf195Q5TG92 126 aa8.1□□□□□ -1.11
CLDN11-209ENST00000489485 Q5XG85 94 aa8.08□□□□□ -1.12
CLDN11-209ENST00000489485 PRR4Q16378 134 aa8.07□□□□□ -1.12
CLDN11-209ENST00000489485 NREPQ16612 68 aa8.06□□□□□ -1.12
CLDN11-209ENST00000489485 CYSTM1Q9H1C7 97 aa8.06□□□□□ -1.12
CLDN11-209ENST00000489485 C20orf197Q8N268 126 aa8.05□□□□□ -1.12
CLDN11-209ENST00000489485 DEFB116Q30KQ4 102 aa8.04□□□□□ -1.12
CLDN11-209ENST00000489485 KLKP1Q107X0 134 aa8.03□□□□□ -1.12
CLDN11-209ENST00000489485 ASB16-AS1Q495Z4 193 aa8.02□□□□□ -1.12
CLDN11-209ENST00000489485 NDUFC1O43677 76 aa8.02□□□□□ -1.13
CLDN11-209ENST00000489485 Q96NJ1 140 aa8.02□□□□□ -1.13
CLDN11-209ENST00000489485 LINC00472Q9H8W2 130 aa8.02□□□□□ -1.13
CLDN11-209ENST00000489485 BPY2O14599 106 aa8.01□□□□□ -1.13
CLDN11-209ENST00000489485 IGLV7-46A0A075B6I9 117 aa8□□□□□ -1.13
CLDN11-209ENST00000489485 FAM236DA0A1B0GTK5 79 aa8□□□□□ -1.13
CLDN11-209ENST00000489485 FAM236CP0DP71 79 aa8□□□□□ -1.13
CLDN11-209ENST00000489485 FP248Q71RG6 208 aaPredicted RBP8□□□□□ -1.13
CLDN11-209ENST00000489485 IGKV4-1P06312 121 aa7.98□□□□□ -1.13
CLDN11-209ENST00000489485 H7BZZ5 65 aa7.96□□□□□ -1.13
CLDN11-209ENST00000489485 ATP5EP56381 51 aaPredicted RBP7.96□□□□□ -1.14
CLDN11-209ENST00000489485 SERP1Q9Y6X1 66 aa7.94□□□□□ -1.14
CLDN11-209ENST00000489485 HMCN2Q8NDA2 5059 aa7.94□□□□□ -1.14
CLDN11-209ENST00000489485 LPAP08519 4548 aa7.92□□□□□ -1.14
CLDN11-209ENST00000489485 SNURFQ9Y675 71 aa7.92□□□□□ -1.14
CLDN11-209ENST00000489485 DSCR10P59022 87 aa7.91□□□□□ -1.14
CLDN11-209ENST00000489485 TMEM254Q8TBM7 123 aa7.91□□□□□ -1.14
CLDN11-209ENST00000489485 TPRXLQ17RH7 258 aa7.9□□□□□ -1.14
CLDN11-209ENST00000489485 Q8N9L7 120 aa7.9□□□□□ -1.14
CLDN11-209ENST00000489485 OCR1Q9BZK8 76 aa7.89□□□□□ -1.15
CLDN11-209ENST00000489485 C9orf92A6NGG3 77 aa7.88□□□□□ -1.15
CLDN11-209ENST00000489485 A8MWP4 228 aa7.88□□□□□ -1.15
CLDN11-209ENST00000489485 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
CLDN11-209ENST00000489485 IGHV6-1A0A0B4J1U7 121 aa7.87□□□□□ -1.15
CLDN11-209ENST00000489485 K7EQZ3 153 aa7.87□□□□□ -1.15
CLDN11-209ENST00000489485 NDUFB1O75438 58 aa7.87□□□□□ -1.15
CLDN11-209ENST00000489485 PMAIP1Q13794 54 aa7.86□□□□□ -1.15
CLDN11-209ENST00000489485 LRP2P98164 4655 aa7.85□□□□□ -1.15
CLDN11-209ENST00000489485 A0A0U1RQV1 116 aa7.85□□□□□ -1.15
CLDN11-209ENST00000489485 A0A1B0GVX0 72 aa7.85□□□□□ -1.15
CLDN11-209ENST00000489485 PRR15Q8IV56 129 aa7.84□□□□□ -1.15
CLDN11-209ENST00000489485 NOTCH2NLQ7Z3S9 236 aa7.83□□□□□ -1.16
CLDN11-209ENST00000489485 SMIM26A0A096LP01 95 aa7.81□□□□□ -1.16
CLDN11-209ENST00000489485 LINC00313P59037 77 aa7.81□□□□□ -1.16
CLDN11-209ENST00000489485 HCG22E2RYF7 251 aa7.79□□□□□ -1.16
CLDN11-209ENST00000489485 H3BS24 57 aa7.79□□□□□ -1.16
CLDN11-209ENST00000489485 XP32Q5T750 250 aa7.78□□□□□ -1.16
CLDN11-209ENST00000489485 C8orf17Q9NRJ1 99 aa7.77□□□□□ -1.17
CLDN11-209ENST00000489485 C8orf87E5RJ46 101 aa7.76□□□□□ -1.17
CLDN11-209ENST00000489485 MMP24-AS1A0A0U1RRL7 71 aa7.75□□□□□ -1.17
CLDN11-209ENST00000489485 WFDC13Q8IUB5 93 aa7.74□□□□□ -1.17
CLDN11-209ENST00000489485 hDV103S1A0JD37 113 aa7.72□□□□□ -1.17
CLDN11-209ENST00000489485 KRTAP16-1A8MUX0 517 aa7.72□□□□□ -1.17
CLDN11-209ENST00000489485 CASC2Q6XLA1 102 aa7.71□□□□□ -1.18
CLDN11-209ENST00000489485 UBR4Q5T4S7 5183 aa7.7□□□□□ -1.18
CLDN11-209ENST00000489485 ZCCHC13Q8WW36 166 aaKnown RBP7.7□□□□□ -1.18
CLDN11-209ENST00000489485 MP68P56378 58 aa7.69□□□□□ -1.18
CLDN11-209ENST00000489485 MRPL34Q9BQ48 92 aaKnown RBP7.68□□□□□ -1.18
CLDN11-209ENST00000489485 H3BPC8 53 aa7.66□□□□□ -1.18
CLDN11-209ENST00000489485 RPL37P61927 97 aaKnown RBP7.66□□□□□ -1.18
CLDN11-209ENST00000489485 BRK1Q8WUW1 75 aa7.66□□□□□ -1.18
CLDN11-209ENST00000489485 SEC61BP60468 96 aaKnown RBP7.65□□□□□ -1.18
CLDN11-209ENST00000489485 Q75L30 129 aa7.65□□□□□ -1.18
CLDN11-209ENST00000489485 C20orf166-AS1Q96NR2 134 aa7.65□□□□□ -1.18
CLDN11-209ENST00000489485 NDUFS5O43920 106 aa7.64□□□□□ -1.19
CLDN11-209ENST00000489485 A8MUU9 505 aa7.64□□□□□ -1.19
CLDN11-209ENST00000489485 Q8N9P0 234 aaPredicted RBP7.64□□□□□ -1.19
CLDN11-209ENST00000489485 PCOTHQ58A44 107 aa7.62□□□□□ -1.19
CLDN11-209ENST00000489485 ATP11AUNQ6ZP68 121 aa7.62□□□□□ -1.19
CLDN11-209ENST00000489485 CYP4F30PQ9H0H9 118 aa7.62□□□□□ -1.19
CLDN11-209ENST00000489485 TRAV22A0A0B4J277 110 aa7.59□□□□□ -1.19
CLDN11-209ENST00000489485 H0Y9P7 68 aa7.58□□□□□ -1.2
CLDN11-209ENST00000489485 SPANXA2-OT1Q8N9U9 137 aa7.57□□□□□ -1.2
CLDN11-209ENST00000489485 C1orf64Q8NEQ6 169 aa7.56□□□□□ -1.2
CLDN11-209ENST00000489485 LINC00208Q96KT6 92 aa7.56□□□□□ -1.2
CLDN11-209ENST00000489485 MUC2Q02817 5179 aa7.56□□□□□ -1.2
CLDN11-209ENST00000489485 MUC17Q685J3 4493 aa7.56□□□□□ -1.2
CLDN11-209ENST00000489485 RBM12B-AS1Q9P1G2 102 aa7.55□□□□□ -1.2
CLDN11-209ENST00000489485 MPLKIPQ8TAP9 179 aa7.55□□□□□ -1.2
CLDN11-209ENST00000489485 TP53AIP1Q9HCN2 124 aa7.54□□□□□ -1.2
CLDN11-209ENST00000489485 RNF213Q63HN8 5207 aa7.54□□□□□ -1.2
CLDN11-209ENST00000489485 Q1T7F1 81 aa7.52□□□□□ -1.21
CLDN11-209ENST00000489485 Q5W150 140 aa7.51□□□□□ -1.21
CLDN11-209ENST00000489485 KRTAP4-1Q9BYQ7 146 aa7.49□□□□□ -1.21
CLDN11-209ENST00000489485 KTN1-AS1Q86SY8 53 aa7.45□□□□□ -1.22
CLDN11-209ENST00000489485 IGKV2D-30A0A075B6S6 120 aa7.38□□□□□ -1.23
CLDN11-209ENST00000489485 IGKV2-30P06310 120 aa7.38□□□□□ -1.23
CLDN11-209ENST00000489485 SPINK7P58062 85 aa7.38□□□□□ -1.23
CLDN11-209ENST00000489485 LCE2DQ5TA82 110 aaPredicted RBP7.34□□□□□ -1.23
CLDN11-209ENST00000489485 C7orf65Q6ZTY9 151 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms