RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261		H3BPC8	53 aa		6.35	□□□□□ -1.39
ITSN1-231	ENST00000489261	MMP24-AS1	A0A0U1RRL7	71 aa		6.34	□□□□□ -1.39
ITSN1-231	ENST00000489261	hDV103S1	A0JD37	113 aa		6.34	□□□□□ -1.39
ITSN1-231	ENST00000489261		H7BZZ5	65 aa		6.34	□□□□□ -1.39
ITSN1-231	ENST00000489261	KRTAP1-4	P0C5Y4	121 aa		6.34	□□□□□ -1.39
ITSN1-231	ENST00000489261	RPS28	P62857	69 aa	Known RBP	6.34	□□□□□ -1.39
ITSN1-231	ENST00000489261	KRTAP13-2	Q52LG2	175 aa		6.34	□□□□□ -1.39
ITSN1-231	ENST00000489261	TP53AIP1	Q9HCN2	124 aa		6.34	□□□□□ -1.39
ITSN1-231	ENST00000489261	C8orf17	Q9NRJ1	99 aa		6.34	□□□□□ -1.39
ITSN1-231	ENST00000489261	PLA2G1B	P04054	148 aa	Known RBP	6.33	□□□□□ -1.4
ITSN1-231	ENST00000489261	MP68	P56378	58 aa		6.33	□□□□□ -1.4
ITSN1-231	ENST00000489261	ATP5E	P56381	51 aa	Predicted RBP	6.33	□□□□□ -1.4
ITSN1-231	ENST00000489261	C4orf48	Q5BLP8	95 aa		6.33	□□□□□ -1.4
ITSN1-231	ENST00000489261	LIMD2	Q9BT23	127 aa		6.33	□□□□□ -1.4
ITSN1-231	ENST00000489261	CYSTM1	Q9H1C7	97 aa		6.33	□□□□□ -1.4
ITSN1-231	ENST00000489261	SNURF	Q9Y675	71 aa		6.33	□□□□□ -1.4
ITSN1-231	ENST00000489261		A0A087X002	238 aa		6.32	□□□□□ -1.4
ITSN1-231	ENST00000489261	C8orf87	E5RJ46	101 aa		6.32	□□□□□ -1.4
ITSN1-231	ENST00000489261		Q5VSD8	79 aa		6.32	□□□□□ -1.4
ITSN1-231	ENST00000489261	SPAG11A	Q6PDA7	123 aa		6.31	□□□□□ -1.4
ITSN1-231	ENST00000489261	SPINK1	P00995	79 aa		6.3	□□□□□ -1.4
ITSN1-231	ENST00000489261	TYMSOS	Q8TAI1	123 aa		6.3	□□□□□ -1.4
ITSN1-231	ENST00000489261	IGHV6-1	A0A0B4J1U7	121 aa		6.29	□□□□□ -1.4
ITSN1-231	ENST00000489261	FAM236D	A0A1B0GTK5	79 aa		6.29	□□□□□ -1.4
ITSN1-231	ENST00000489261	SMR3B	P02814	79 aa	Predicted RBP	6.29	□□□□□ -1.4
ITSN1-231	ENST00000489261	FAM236C	P0DP71	79 aa		6.29	□□□□□ -1.4
ITSN1-231	ENST00000489261	RPS29	P62273	56 aa	Known RBP	6.29	□□□□□ -1.4
ITSN1-231	ENST00000489261	ZCCHC13	Q8WW36	166 aa	Known RBP	6.29	□□□□□ -1.4
ITSN1-231	ENST00000489261	MRPL34	Q9BQ48	92 aa	Known RBP	6.28	□□□□□ -1.4
ITSN1-231	ENST00000489261	SRRM2	Q9UQ35	2752 aa	Known RBP	6.27	□□□□□ -1.41
ITSN1-231	ENST00000489261	FAM229A	H3BQW9	127 aa		6.26	□□□□□ -1.41
ITSN1-231	ENST00000489261	C1orf195	Q5TG92	126 aa		6.26	□□□□□ -1.41
ITSN1-231	ENST00000489261	FAT1	Q14517	4588 aa		6.26	□□□□□ -1.41
ITSN1-231	ENST00000489261	VPS13B	Q7Z7G8	4022 aa		6.25	□□□□□ -1.41
ITSN1-231	ENST00000489261		H0Y9P7	68 aa		6.25	□□□□□ -1.41
ITSN1-231	ENST00000489261	TRAV22	A0A0B4J277	110 aa		6.24	□□□□□ -1.41
ITSN1-231	ENST00000489261	SERP1	Q9Y6X1	66 aa		6.24	□□□□□ -1.41
ITSN1-231	ENST00000489261	LINC00313	P59037	77 aa		6.23	□□□□□ -1.41
ITSN1-231	ENST00000489261	KRTAP10-4	P60372	401 aa	Predicted RBP	6.22	□□□□□ -1.41
ITSN1-231	ENST00000489261	LINC00304	Q8N9R0	145 aa		6.22	□□□□□ -1.41
ITSN1-231	ENST00000489261	LINC00208	Q96KT6	92 aa		6.22	□□□□□ -1.41
ITSN1-231	ENST00000489261	FLG2	Q5D862	2391 aa	Predicted RBP	6.2	□□□□□ -1.42
ITSN1-231	ENST00000489261	NDUFS5	O43920	106 aa		6.2	□□□□□ -1.42
ITSN1-231	ENST00000489261	PRR26	Q8N8Z3	221 aa		6.2	□□□□□ -1.42
ITSN1-231	ENST00000489261	C1orf64	Q8NEQ6	169 aa		6.2	□□□□□ -1.42
ITSN1-231	ENST00000489261	NOTCH2NL	Q7Z3S9	236 aa		6.18	□□□□□ -1.42
ITSN1-231	ENST00000489261	SPANXA2-OT1	Q8N9U9	137 aa		6.18	□□□□□ -1.42
ITSN1-231	ENST00000489261	CYP4F30P	Q9H0H9	118 aa		6.17	□□□□□ -1.42
ITSN1-231	ENST00000489261	MYCBP2	O75592	4640 aa		6.16	□□□□□ -1.42
ITSN1-231	ENST00000489261		Q8N9P0	234 aa	Predicted RBP	6.16	□□□□□ -1.42
ITSN1-231	ENST00000489261	DMBT1	Q9UGM3	2413 aa	Predicted RBP	6.13	□□□□□ -1.43
ITSN1-231	ENST00000489261	LOC101927531	A0A1B0GV80	90 aa		6.13	□□□□□ -1.43
ITSN1-231	ENST00000489261	SMIM26	A0A096LP01	95 aa		6.11	□□□□□ -1.43
ITSN1-231	ENST00000489261	HERC1	Q15751	4861 aa		6.11	□□□□□ -1.43
ITSN1-231	ENST00000489261	IGLV7-46	A0A075B6I9	117 aa		6.1	□□□□□ -1.43
ITSN1-231	ENST00000489261	KRTAP16-1	A8MUX0	517 aa		6.1	□□□□□ -1.43
ITSN1-231	ENST00000489261		J3QL48	77 aa		6.09	□□□□□ -1.43
ITSN1-231	ENST00000489261	KRTAP13-3	Q3SY46	172 aa		6.09	□□□□□ -1.43
ITSN1-231	ENST00000489261	PKHD1L1	Q86WI1	4243 aa		6.09	□□□□□ -1.43
ITSN1-231	ENST00000489261	OXT	P01178	125 aa		6.08	□□□□□ -1.44
ITSN1-231	ENST00000489261		Q5W150	140 aa		6.07	□□□□□ -1.44
ITSN1-231	ENST00000489261	LRP1	Q07954	4544 aa	Known RBP	6.06	□□□□□ -1.44
ITSN1-231	ENST00000489261	KRTAP10-8	P60410	259 aa		6.05	□□□□□ -1.44
ITSN1-231	ENST00000489261	FAT3	Q8TDW7	4589 aa		6.03	□□□□□ -1.44
ITSN1-231	ENST00000489261	PCOTH	Q58A44	107 aa		6.03	□□□□□ -1.44
ITSN1-231	ENST00000489261	IGKV2-30	P06310	120 aa		6.01	□□□□□ -1.45
ITSN1-231	ENST00000489261	MT1HL1	P0DM35	61 aa		6.01	□□□□□ -1.45
ITSN1-231	ENST00000489261	PRR4	Q16378	134 aa		6	□□□□□ -1.45
ITSN1-231	ENST00000489261	FP248	Q71RG6	208 aa	Predicted RBP	5.99	□□□□□ -1.45
ITSN1-231	ENST00000489261	C20orf166-AS1	Q96NR2	134 aa		5.99	□□□□□ -1.45
ITSN1-231	ENST00000489261		A8MUU9	505 aa		5.98	□□□□□ -1.45
ITSN1-231	ENST00000489261		V9GYY9	64 aa		5.97	□□□□□ -1.45
ITSN1-231	ENST00000489261	ACYP2	P14621	99 aa		5.95	□□□□□ -1.46
ITSN1-231	ENST00000489261	HRES1	P13985	223 aa		5.94	□□□□□ -1.46
ITSN1-231	ENST00000489261		Q1T7F1	81 aa		5.94	□□□□□ -1.46
ITSN1-231	ENST00000489261	RETNLB	Q9BQ08	111 aa		5.94	□□□□□ -1.46
ITSN1-231	ENST00000489261	COA5	Q86WW8	74 aa		5.93	□□□□□ -1.46
ITSN1-231	ENST00000489261	C7orf65	Q6ZTY9	151 aa		5.92	□□□□□ -1.46
ITSN1-231	ENST00000489261	C9orf92	A6NGG3	77 aa		5.91	□□□□□ -1.46
ITSN1-231	ENST00000489261		Q75L30	129 aa		5.91	□□□□□ -1.46
ITSN1-231	ENST00000489261	DMAC1	Q96GE9	116 aa		5.91	□□□□□ -1.46
ITSN1-231	ENST00000489261	HMCN2	Q8NDA2	5059 aa		5.9	□□□□□ -1.46
ITSN1-231	ENST00000489261	TNXB	P22105	4242 aa		5.9	□□□□□ -1.46
ITSN1-231	ENST00000489261	IGKV2D-30	A0A075B6S6	120 aa		5.9	□□□□□ -1.46
ITSN1-231	ENST00000489261	C4orf26	Q17RF5	130 aa		5.9	□□□□□ -1.46
ITSN1-231	ENST00000489261	MPLKIP	Q8TAP9	179 aa		5.88	□□□□□ -1.47
ITSN1-231	ENST00000489261		A8MUN3	132 aa		5.86	□□□□□ -1.47
ITSN1-231	ENST00000489261	CHKB-CPT1B	H3BT56	60 aa		5.82	□□□□□ -1.48
ITSN1-231	ENST00000489261	ATP11AUN	Q6ZP68	121 aa		5.82	□□□□□ -1.48
ITSN1-231	ENST00000489261	LINC01558	Q9Y6Z2	57 aa		5.81	□□□□□ -1.48
ITSN1-231	ENST00000489261	SPINK7	P58062	85 aa		5.79	□□□□□ -1.48
ITSN1-231	ENST00000489261	RPL37	P61927	97 aa	Known RBP	5.79	□□□□□ -1.48
ITSN1-231	ENST00000489261	UBR4	Q5T4S7	5183 aa		5.77	□□□□□ -1.49
ITSN1-231	ENST00000489261	XP32	Q5T750	250 aa		5.75	□□□□□ -1.49
ITSN1-231	ENST00000489261	SPTSSB	Q8NFR3	76 aa		5.74	□□□□□ -1.49
ITSN1-231	ENST00000489261	LRP2	P98164	4655 aa		5.74	□□□□□ -1.49
ITSN1-231	ENST00000489261	PSPHP1	O15172	72 aa		5.73	□□□□□ -1.49
ITSN1-231	ENST00000489261	TPRXL	Q17RH7	258 aa		5.73	□□□□□ -1.49
ITSN1-231	ENST00000489261	PRR15L	Q9BU68	103 aa		5.73	□□□□□ -1.49
ITSN1-231	ENST00000489261		Q5VV11	94 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms