RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 A0A1B0GU69 56 aa1.82□□□□□ -2.12
CCL20-204ENST00000489160 NDUFA4O00483 81 aa1.82□□□□□ -2.12
CCL20-204ENST00000489160 C10orf99Q6UWK7 81 aa1.82□□□□□ -2.12
CCL20-204ENST00000489160 Q6ZSA8 131 aa1.82□□□□□ -2.12
CCL20-204ENST00000489160 KNTC1P50748 2209 aa1.82□□□□□ -2.12
CCL20-204ENST00000489160 PKDREJQ9NTG1 2253 aa1.82□□□□□ -2.12
CCL20-204ENST00000489160 LINC01546A6NGU7 62 aa1.81□□□□□ -2.12
CCL20-204ENST00000489160 SNRPGP62308 76 aaKnown RBP1.81□□□□□ -2.12
CCL20-204ENST00000489160 RPL38P63173 70 aaKnown RBP1.81□□□□□ -2.12
CCL20-204ENST00000489160 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
CCL20-204ENST00000489160 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.81□□□□□ -2.12
CCL20-204ENST00000489160 NCOA6Q14686 2063 aaPredicted RBP1.81□□□□□ -2.12
CCL20-204ENST00000489160 RYR2Q92736 4967 aa1.8□□□□□ -2.12
CCL20-204ENST00000489160 IGIPA6NJ69 53 aa1.8□□□□□ -2.12
CCL20-204ENST00000489160 M0R1W7 72 aa1.8□□□□□ -2.12
CCL20-204ENST00000489160 COX7BP24311 80 aa1.8□□□□□ -2.12
CCL20-204ENST00000489160 SMIM11BQ8TCY0 68 aa1.8□□□□□ -2.12
CCL20-204ENST00000489160 CACNA1CQ13936 2221 aa1.8□□□□□ -2.12
CCL20-204ENST00000489160 HERC2O95714 4834 aa1.8□□□□□ -2.12
CCL20-204ENST00000489160 HRNRQ86YZ3 2850 aaPredicted RBP1.8□□□□□ -2.12
CCL20-204ENST00000489160 ZANQ9Y493 2812 aa1.79□□□□□ -2.12
CCL20-204ENST00000489160 LINC00959A0A1B0GUT2 108 aa1.79□□□□□ -2.12
CCL20-204ENST00000489160 PIN1P1O15428 100 aa1.79□□□□□ -2.12
CCL20-204ENST00000489160 COX6B1P14854 86 aa1.79□□□□□ -2.12
CCL20-204ENST00000489160 KCNQ1DNQ9H478 68 aa1.79□□□□□ -2.12
CCL20-204ENST00000489160 KNL1Q8NG31 2342 aa1.78□□□□□ -2.12
CCL20-204ENST00000489160 I3L3M4 83 aa1.78□□□□□ -2.12
CCL20-204ENST00000489160 ARL14EPLP0DKL9 152 aa1.78□□□□□ -2.12
CCL20-204ENST00000489160 CMYA5Q8N3K9 4069 aa1.77□□□□□ -2.13
CCL20-204ENST00000489160 H0YGX0 51 aa1.77□□□□□ -2.13
CCL20-204ENST00000489160 MRPL33O75394 65 aaKnown RBP1.77□□□□□ -2.13
CCL20-204ENST00000489160 Q6ZRX8 168 aa1.77□□□□□ -2.13
CCL20-204ENST00000489160 PLAC4Q8WY50 150 aa1.77□□□□□ -2.13
CCL20-204ENST00000489160 DYNC2H1Q8NCM8 4307 aaKnown RBP1.76□□□□□ -2.13
CCL20-204ENST00000489160 A0A096LNT2 108 aa1.76□□□□□ -2.13
CCL20-204ENST00000489160 ETDCA0A1B0GVM5 59 aa1.76□□□□□ -2.13
CCL20-204ENST00000489160 LY6G6CO95867 125 aa1.76□□□□□ -2.13
CCL20-204ENST00000489160 SPINK13Q1W4C9 94 aa1.76□□□□□ -2.13
CCL20-204ENST00000489160 SORL1Q92673 2214 aa1.76□□□□□ -2.13
CCL20-204ENST00000489160 MUC2Q02817 5179 aa1.76□□□□□ -2.13
CCL20-204ENST00000489160 SACSQ9NZJ4 4579 aa1.76□□□□□ -2.13
CCL20-204ENST00000489160 SONP18583 2426 aaKnown RBP1.76□□□□□ -2.13
CCL20-204ENST00000489160 WNK1Q9H4A3 2382 aa1.75□□□□□ -2.13
CCL20-204ENST00000489160 HAMPP81172 84 aa1.75□□□□□ -2.13
CCL20-204ENST00000489160 AKAP6Q13023 2319 aa1.74□□□□□ -2.13
CCL20-204ENST00000489160 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.74□□□□□ -2.131e-7■■■□□ 19.1
CCL20-204ENST00000489160 CSMD3Q7Z407 3707 aa1.74□□□□□ -2.13
CCL20-204ENST00000489160 GVQW2A0A096LPI5 108 aaPredicted RBP1.74□□□□□ -2.13
CCL20-204ENST00000489160 CPSF4LA6NMK7 179 aaKnown RBP1.74□□□□□ -2.13
CCL20-204ENST00000489160 G3V318 75 aa1.74□□□□□ -2.13
CCL20-204ENST00000489160 FXYD6P3P58550 94 aa1.74□□□□□ -2.13
CCL20-204ENST00000489160 SSBP3-AS1Q7Z2R9 100 aa1.73□□□□□ -2.13
CCL20-204ENST00000489160 LYSTQ99698 3801 aa1.72□□□□□ -2.13
CCL20-204ENST00000489160 DEFB131BA0A096LNP1 70 aa1.72□□□□□ -2.13
CCL20-204ENST00000489160 SPTY2D1-AS1A0A0U1RR47 76 aa1.72□□□□□ -2.13
CCL20-204ENST00000489160 SPINK4O60575 86 aa1.71□□□□□ -2.14
CCL20-204ENST00000489160 TIMM8BQ9Y5J9 83 aaPredicted RBP1.71□□□□□ -2.14
CCL20-204ENST00000489160 FRAS1Q86XX4 4008 aa1.71□□□□□ -2.14
CCL20-204ENST00000489160 DNAH1Q9P2D7 4330 aa1.71□□□□□ -2.14
CCL20-204ENST00000489160 ABCA13Q86UQ4 5058 aa1.71□□□□□ -2.14
CCL20-204ENST00000489160 TMEM167BQ9NRX6 74 aa1.7□□□□□ -2.14
CCL20-204ENST00000489160 TENM2Q9NT68 2774 aa1.7□□□□□ -2.14
CCL20-204ENST00000489160 U3KQA8 63 aa1.7□□□□□ -2.14
CCL20-204ENST00000489160 USF3Q68DE3 2245 aa1.7□□□□□ -2.14
CCL20-204ENST00000489160 COL7A1Q02388 2944 aa1.69□□□□□ -2.14
CCL20-204ENST00000489160 HECTD4Q9Y4D8 3996 aa1.69□□□□□ -2.14
CCL20-204ENST00000489160 NDUFA3O95167 84 aa1.69□□□□□ -2.14
CCL20-204ENST00000489160 DEFB109BQ30KR1 87 aa1.69□□□□□ -2.14
CCL20-204ENST00000489160 TENM3Q9P273 2699 aa1.69□□□□□ -2.14
CCL20-204ENST00000489160 TNCP24821 2201 aa1.68□□□□□ -2.14
CCL20-204ENST00000489160 RPL37P61927 97 aaKnown RBP1.68□□□□□ -2.14
CCL20-204ENST00000489160 CNTRLQ7Z7A1 2325 aa1.68□□□□□ -2.14
CCL20-204ENST00000489160 HERC1Q15751 4861 aa1.67□□□□□ -2.14
CCL20-204ENST00000489160 UBE2DNLQ8IWF7 75 aa1.67□□□□□ -2.14
CCL20-204ENST00000489160 CRCT1Q9UGL9 99 aa1.66□□□□□ -2.14
CCL20-204ENST00000489160 CRIPTQ9P021 101 aa1.65□□□□□ -2.15
CCL20-204ENST00000489160 FLG2Q5D862 2391 aaPredicted RBP1.64□□□□□ -2.15
CCL20-204ENST00000489160 LINC00158P58513 81 aa1.64□□□□□ -2.15
CCL20-204ENST00000489160 COX6B2Q6YFQ2 88 aa1.64□□□□□ -2.15
CCL20-204ENST00000489160 USMG5Q96IX5 58 aa1.64□□□□□ -2.15
CCL20-204ENST00000489160 DNAH9Q9NYC9 4486 aa1.63□□□□□ -2.15
CCL20-204ENST00000489160 ABCA1O95477 2261 aa1.63□□□□□ -2.15
CCL20-204ENST00000489160 CRIP1P50238 77 aa1.63□□□□□ -2.15
CCL20-204ENST00000489160 Q8IZM0 81 aa1.63□□□□□ -2.15
CCL20-204ENST00000489160 DEFB133Q30KQ1 61 aa1.62□□□□□ -2.15
CCL20-204ENST00000489160 SMIM2Q9BVW6 85 aa1.62□□□□□ -2.15
CCL20-204ENST00000489160 DNAH3Q8TD57 4116 aa1.62□□□□□ -2.15
CCL20-204ENST00000489160 STARD9Q9P2P6 4700 aa1.61□□□□□ -2.15
CCL20-204ENST00000489160 DNAH7Q8WXX0 4024 aa1.61□□□□□ -2.15
CCL20-204ENST00000489160 K7EIL1 84 aa1.61□□□□□ -2.15
CCL20-204ENST00000489160 CDKN2A-AS1Q9UH64 79 aa1.61□□□□□ -2.15
CCL20-204ENST00000489160 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
CCL20-204ENST00000489160 LYNX1G3V0Z9 82 aa1.6□□□□□ -2.15
CCL20-204ENST00000489160 K7EQZ3 153 aa1.6□□□□□ -2.15
CCL20-204ENST00000489160 CCL22O00626 93 aa1.6□□□□□ -2.15
CCL20-204ENST00000489160 PIGYQ3MUY2 71 aa1.6□□□□□ -2.15
CCL20-204ENST00000489160 LINC00308Q8TCZ7 52 aa1.6□□□□□ -2.15
CCL20-204ENST00000489160 TFF3Q07654 80 aa1.59□□□□□ -2.15
CCL20-204ENST00000489160 SPINK9Q5DT21 86 aa1.59□□□□□ -2.15
CCL20-204ENST00000489160 CNFNQ9BYD5 112 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms