RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 Q8NBF4 154 aa6.48□□□□□ -1.37
COL21A1-211ENST00000488912 A0A087X002 238 aa6.48□□□□□ -1.37
COL21A1-211ENST00000488912 FAM229AH3BQW9 127 aa6.47□□□□□ -1.37
COL21A1-211ENST00000488912 C1orf64Q8NEQ6 169 aa6.47□□□□□ -1.37
COL21A1-211ENST00000488912 TRAV22A0A0B4J277 110 aa6.47□□□□□ -1.37
COL21A1-211ENST00000488912 PLA2G1BP04054 148 aaKnown RBP6.47□□□□□ -1.37
COL21A1-211ENST00000488912 Q5VSD8 79 aa6.47□□□□□ -1.37
COL21A1-211ENST00000488912 CYP4F30PQ9H0H9 118 aa6.47□□□□□ -1.37
COL21A1-211ENST00000488912 KRTAP17-1Q9BYP8 105 aa6.46□□□□□ -1.38
COL21A1-211ENST00000488912 Q8N9L7 120 aa6.45□□□□□ -1.38
COL21A1-211ENST00000488912 ZCCHC13Q8WW36 166 aaKnown RBP6.45□□□□□ -1.38
COL21A1-211ENST00000488912 KRTAP13-2Q52LG2 175 aa6.45□□□□□ -1.38
COL21A1-211ENST00000488912 KTN1-AS1Q86SY8 53 aa6.45□□□□□ -1.38
COL21A1-211ENST00000488912 PKHD1L1Q86WI1 4243 aa6.43□□□□□ -1.38
COL21A1-211ENST00000488912 RBM12B-AS1Q9P1G2 102 aa6.43□□□□□ -1.38
COL21A1-211ENST00000488912 PSPHP1O15172 72 aa6.42□□□□□ -1.38
COL21A1-211ENST00000488912 A0A1B0GW54 56 aa6.41□□□□□ -1.38
COL21A1-211ENST00000488912 A0A087WSZ3 146 aa6.41□□□□□ -1.38
COL21A1-211ENST00000488912 Q5VV11 94 aa6.4□□□□□ -1.38
COL21A1-211ENST00000488912 SSBP3-AS1Q7Z2R9 100 aa6.4□□□□□ -1.38
COL21A1-211ENST00000488912 Q8N1X5 172 aa6.4□□□□□ -1.38
COL21A1-211ENST00000488912 PRR26Q8N8Z3 221 aa6.39□□□□□ -1.39
COL21A1-211ENST00000488912 NDUFS5O43920 106 aa6.39□□□□□ -1.39
COL21A1-211ENST00000488912 A8MUN3 132 aa6.38□□□□□ -1.39
COL21A1-211ENST00000488912 TYMSOSQ8TAI1 123 aa6.37□□□□□ -1.39
COL21A1-211ENST00000488912 A8MU10 97 aa6.36□□□□□ -1.39
COL21A1-211ENST00000488912 ATP11AUNQ6ZP68 121 aa6.36□□□□□ -1.39
COL21A1-211ENST00000488912 LRP1Q07954 4544 aaKnown RBP6.35□□□□□ -1.39
COL21A1-211ENST00000488912 BIRC6Q9NR09 4857 aa6.35□□□□□ -1.39
COL21A1-211ENST00000488912 FLG2Q5D862 2391 aaPredicted RBP6.34□□□□□ -1.4
COL21A1-211ENST00000488912 A6NN06 94 aa6.33□□□□□ -1.4
COL21A1-211ENST00000488912 LIMD2Q9BT23 127 aa6.33□□□□□ -1.4
COL21A1-211ENST00000488912 NDUFB1O75438 58 aa6.32□□□□□ -1.4
COL21A1-211ENST00000488912 DEFB116Q30KQ4 102 aa6.32□□□□□ -1.4
COL21A1-211ENST00000488912 C4orf48Q5BLP8 95 aa6.32□□□□□ -1.4
COL21A1-211ENST00000488912 Q8N9P0 234 aaPredicted RBP6.31□□□□□ -1.4
COL21A1-211ENST00000488912 FAT3Q8TDW7 4589 aa6.3□□□□□ -1.4
COL21A1-211ENST00000488912 LINC00304Q8N9R0 145 aa6.3□□□□□ -1.4
COL21A1-211ENST00000488912 LINC00472Q9H8W2 130 aa6.3□□□□□ -1.4
COL21A1-211ENST00000488912 CHKB-CPT1BH3BT56 60 aa6.3□□□□□ -1.4
COL21A1-211ENST00000488912 Q96NJ1 140 aa6.3□□□□□ -1.4
COL21A1-211ENST00000488912 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
COL21A1-211ENST00000488912 MYCBP2O75592 4640 aa6.29□□□□□ -1.4
COL21A1-211ENST00000488912 HCG22E2RYF7 251 aa6.29□□□□□ -1.4
COL21A1-211ENST00000488912 LCA10Q71F78 164 aa6.29□□□□□ -1.4
COL21A1-211ENST00000488912 Q75L30 129 aa6.29□□□□□ -1.4
COL21A1-211ENST00000488912 TNXBP22105 4242 aa6.29□□□□□ -1.4
COL21A1-211ENST00000488912 DSCR10P59022 87 aa6.28□□□□□ -1.4
COL21A1-211ENST00000488912 SPANXA2-OT1Q8N9U9 137 aa6.28□□□□□ -1.4
COL21A1-211ENST00000488912 LOC101927531A0A1B0GV80 90 aa6.27□□□□□ -1.41
COL21A1-211ENST00000488912 SPINK1P00995 79 aa6.27□□□□□ -1.41
COL21A1-211ENST00000488912 C7orf65Q6ZTY9 151 aa6.26□□□□□ -1.41
COL21A1-211ENST00000488912 SPAG11AQ6PDA7 123 aa6.26□□□□□ -1.41
COL21A1-211ENST00000488912 HERC2O95714 4834 aa6.26□□□□□ -1.41
COL21A1-211ENST00000488912 KRTAP10-8P60410 259 aa6.25□□□□□ -1.41
COL21A1-211ENST00000488912 ASB16-AS1Q495Z4 193 aa6.25□□□□□ -1.41
COL21A1-211ENST00000488912 K7EQZ3 153 aa6.25□□□□□ -1.41
COL21A1-211ENST00000488912 CDC42SE1Q9NRR8 79 aa6.25□□□□□ -1.41
COL21A1-211ENST00000488912 PRR4Q16378 134 aa6.24□□□□□ -1.41
COL21A1-211ENST00000488912 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
COL21A1-211ENST00000488912 LINC00208Q96KT6 92 aa6.24□□□□□ -1.41
COL21A1-211ENST00000488912 PRR15LQ9BU68 103 aa6.24□□□□□ -1.41
COL21A1-211ENST00000488912 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
COL21A1-211ENST00000488912 ABCA13Q86UQ4 5058 aa6.23□□□□□ -1.41
COL21A1-211ENST00000488912 A8MWP4 228 aa6.22□□□□□ -1.41
COL21A1-211ENST00000488912 C8orf87E5RJ46 101 aa6.22□□□□□ -1.41
COL21A1-211ENST00000488912 H3BPC8 53 aa6.21□□□□□ -1.42
COL21A1-211ENST00000488912 MT1HL1P0DM35 61 aa6.21□□□□□ -1.42
COL21A1-211ENST00000488912 MP68P56378 58 aa6.2□□□□□ -1.42
COL21A1-211ENST00000488912 A6NED7 52 aa6.19□□□□□ -1.42
COL21A1-211ENST00000488912 DMBT1Q9UGM3 2413 aaPredicted RBP6.19□□□□□ -1.42
COL21A1-211ENST00000488912 IGHV6-1A0A0B4J1U7 121 aa6.16□□□□□ -1.42
COL21A1-211ENST00000488912 A0A1B0GVX0 72 aa6.16□□□□□ -1.42
COL21A1-211ENST00000488912 RETNLBQ9BQ08 111 aa6.15□□□□□ -1.42
COL21A1-211ENST00000488912 KRTAP29-1A8MX34 341 aaPredicted RBP6.14□□□□□ -1.43
COL21A1-211ENST00000488912 LINC01558Q9Y6Z2 57 aa6.14□□□□□ -1.43
COL21A1-211ENST00000488912 NOTCH2NLQ7Z3S9 236 aa6.14□□□□□ -1.43
COL21A1-211ENST00000488912 WFDC13Q8IUB5 93 aa6.14□□□□□ -1.43
COL21A1-211ENST00000488912 MMP24-AS1A0A0U1RRL7 71 aa6.13□□□□□ -1.43
COL21A1-211ENST00000488912 C8orf17Q9NRJ1 99 aa6.13□□□□□ -1.43
COL21A1-211ENST00000488912 COA5Q86WW8 74 aa6.12□□□□□ -1.43
COL21A1-211ENST00000488912 CASC2Q6XLA1 102 aa6.11□□□□□ -1.43
COL21A1-211ENST00000488912 IGLV7-46A0A075B6I9 117 aa6.1□□□□□ -1.43
COL21A1-211ENST00000488912 H0Y9P7 68 aa6.1□□□□□ -1.43
COL21A1-211ENST00000488912 H3BS24 57 aa6.08□□□□□ -1.44
COL21A1-211ENST00000488912 LINC00313P59037 77 aa6.07□□□□□ -1.44
COL21A1-211ENST00000488912 PCLOQ9Y6V0 5065 aa6.06□□□□□ -1.44
COL21A1-211ENST00000488912 J3QL48 77 aa6.05□□□□□ -1.44
COL21A1-211ENST00000488912 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
COL21A1-211ENST00000488912 SPINK7P58062 85 aa6.04□□□□□ -1.44
COL21A1-211ENST00000488912 KRTAP16-1A8MUX0 517 aa6.03□□□□□ -1.44
COL21A1-211ENST00000488912 LINC01554Q52M75 96 aa6.03□□□□□ -1.44
COL21A1-211ENST00000488912 C9orf92A6NGG3 77 aa6.03□□□□□ -1.44
COL21A1-211ENST00000488912 PRAC1Q96KF2 57 aa5.98□□□□□ -1.45
COL21A1-211ENST00000488912 KRTAP13-3Q3SY46 172 aa5.96□□□□□ -1.46
COL21A1-211ENST00000488912 TP53AIP1Q9HCN2 124 aa5.96□□□□□ -1.46
COL21A1-211ENST00000488912 HRES1P13985 223 aa5.94□□□□□ -1.46
COL21A1-211ENST00000488912 Q5W150 140 aa5.92□□□□□ -1.46
COL21A1-211ENST00000488912 ADM2Q7Z4H4 148 aa5.92□□□□□ -1.46
COL21A1-211ENST00000488912 C20orf166-AS1Q96NR2 134 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms