RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 ORMDL1Q9P0S3 153 aa3.04□□□□□ -1.92
PTCH1-211ENST00000488809 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
PTCH1-211ENST00000488809 A0A1B0GV72 72 aa3.03□□□□□ -1.92
PTCH1-211ENST00000488809 TMEM256-PLSCR3K7ERE1 68 aa3.03□□□□□ -1.92
PTCH1-211ENST00000488809 H1FX-AS1Q4G0G2 97 aa3.03□□□□□ -1.92
PTCH1-211ENST00000488809 VPS25Q9BRG1 176 aa3.02□□□□□ -1.93
PTCH1-211ENST00000488809 TMEM238LA0A1B0GVL6 79 aa3.01□□□□□ -1.93
PTCH1-211ENST00000488809 A6NJY4 79 aa3.01□□□□□ -1.93
PTCH1-211ENST00000488809 S100A2P29034 98 aa3.01□□□□□ -1.93
PTCH1-211ENST00000488809 IGKV3D-7A0A0C4DH55 119 aa3□□□□□ -1.93
PTCH1-211ENST00000488809 COX8AP10176 69 aa3□□□□□ -1.93
PTCH1-211ENST00000488809 Q5VV11 94 aa3□□□□□ -1.93
PTCH1-211ENST00000488809 PRO1854Q9UHT4 67 aa3□□□□□ -1.93
PTCH1-211ENST00000488809 FAM236AA0A1B0GUQ0 79 aa2.99□□□□□ -1.93
PTCH1-211ENST00000488809 FAM236BA0A1B0GV22 79 aa2.99□□□□□ -1.93
PTCH1-211ENST00000488809 DLEU1O43261 78 aa2.99□□□□□ -1.93
PTCH1-211ENST00000488809 KRTAP5-9P26371 169 aa2.99□□□□□ -1.93
PTCH1-211ENST00000488809 UBE2V1Q13404 147 aa2.99□□□□□ -1.93
PTCH1-211ENST00000488809 KMT2DO14686 5537 aa2.98□□□□□ -1.93
PTCH1-211ENST00000488809 TRIAP1O43715 76 aa2.98□□□□□ -1.93
PTCH1-211ENST00000488809 COX6CP09669 75 aa2.98□□□□□ -1.93
PTCH1-211ENST00000488809 RBM3P98179 157 aaKnown RBP2.98□□□□□ -1.93
PTCH1-211ENST00000488809 HIGD1BQ9P298 99 aa2.98□□□□□ -1.93
PTCH1-211ENST00000488809 KRTAP2-3P0C7H8 128 aa2.97□□□□□ -1.93
PTCH1-211ENST00000488809 PSMB2P49721 201 aa2.97□□□□□ -1.93
PTCH1-211ENST00000488809 Q6ZVQ6 151 aa2.97□□□□□ -1.93
PTCH1-211ENST00000488809 HIST1H2BLQ99880 126 aa2.97□□□□□ -1.93
PTCH1-211ENST00000488809 KRTAP2-4Q9BYR9 128 aa2.97□□□□□ -1.93
PTCH1-211ENST00000488809 C8orf17Q9NRJ1 99 aa2.97□□□□□ -1.93
PTCH1-211ENST00000488809 C2orf91Q6ZV80 131 aa2.96□□□□□ -1.94
PTCH1-211ENST00000488809 CEND1Q8N111 149 aa2.96□□□□□ -1.94
PTCH1-211ENST00000488809 HIST3H2BBQ8N257 126 aa2.96□□□□□ -1.94
PTCH1-211ENST00000488809 C9JAW5 83 aa2.95□□□□□ -1.94
PTCH1-211ENST00000488809 KRTAP10-5P60370 271 aa2.95□□□□□ -1.94
PTCH1-211ENST00000488809 S100A6P06703 90 aa2.94□□□□□ -1.94
PTCH1-211ENST00000488809 MT1BP07438 61 aa2.94□□□□□ -1.94
PTCH1-211ENST00000488809 Q6ZQT0 140 aa2.94□□□□□ -1.94
PTCH1-211ENST00000488809 C7orf65Q6ZTY9 151 aa2.94□□□□□ -1.94
PTCH1-211ENST00000488809 C14orf144Q96I85 54 aa2.94□□□□□ -1.94
PTCH1-211ENST00000488809 MRPL34Q9BQ48 92 aaKnown RBP2.94□□□□□ -1.94
PTCH1-211ENST00000488809 IMUPQ9GZP8 106 aa2.94□□□□□ -1.94
PTCH1-211ENST00000488809 IGKV2D-30A0A075B6S6 120 aa2.93□□□□□ -1.94
PTCH1-211ENST00000488809 A0A1B0GW54 56 aa2.93□□□□□ -1.94
PTCH1-211ENST00000488809 NDUFS5O43920 106 aa2.93□□□□□ -1.94
PTCH1-211ENST00000488809 IGKV2-30P06310 120 aa2.93□□□□□ -1.94
PTCH1-211ENST00000488809 TMEM254Q8TBM7 123 aa2.93□□□□□ -1.94
PTCH1-211ENST00000488809 FXYD2P54710 66 aa2.92□□□□□ -1.94
PTCH1-211ENST00000488809 KRTAP19-8Q3LI54 63 aa2.92□□□□□ -1.94
PTCH1-211ENST00000488809 SPATA45Q537H7 98 aa2.92□□□□□ -1.94
PTCH1-211ENST00000488809 SPRR2GQ9BYE4 73 aa2.92□□□□□ -1.94
PTCH1-211ENST00000488809 PAM16Q9Y3D7 125 aa2.92□□□□□ -1.94
PTCH1-211ENST00000488809 C5orf47Q569G3 176 aa2.91□□□□□ -1.94
PTCH1-211ENST00000488809 PRR15Q8IV56 129 aa2.91□□□□□ -1.94
PTCH1-211ENST00000488809 hDV103S1A0JD37 113 aa2.9□□□□□ -1.95
PTCH1-211ENST00000488809 S100A1P23297 94 aa2.9□□□□□ -1.95
PTCH1-211ENST00000488809 VAMP8Q9BV40 100 aa2.9□□□□□ -1.95
PTCH1-211ENST00000488809 MMP24-AS1A0A0U1RRL7 71 aa2.89□□□□□ -1.95
PTCH1-211ENST00000488809 JMJD7-PLA2G4BH0Y9G9 81 aa2.89□□□□□ -1.95
PTCH1-211ENST00000488809 SCGB1C2P0DMR2 95 aa2.89□□□□□ -1.95
PTCH1-211ENST00000488809 CSAG1Q6PB30 78 aa2.89□□□□□ -1.95
PTCH1-211ENST00000488809 S4R3F8 94 aa2.89□□□□□ -1.95
PTCH1-211ENST00000488809 PDE6GP18545 87 aa2.88□□□□□ -1.95
PTCH1-211ENST00000488809 SPRR2EP22531 72 aa2.88□□□□□ -1.95
PTCH1-211ENST00000488809 SPRR2BP35325 72 aa2.88□□□□□ -1.95
PTCH1-211ENST00000488809 SPRR2AP35326 72 aa2.88□□□□□ -1.95
PTCH1-211ENST00000488809 HSD52Q0P140 79 aa2.88□□□□□ -1.95
PTCH1-211ENST00000488809 NREPQ16612 68 aa2.88□□□□□ -1.95
PTCH1-211ENST00000488809 C4orf26Q17RF5 130 aa2.88□□□□□ -1.95
PTCH1-211ENST00000488809 K7ERJ3 54 aa2.87□□□□□ -1.95
PTCH1-211ENST00000488809 BAALC-AS2P0C853 105 aa2.87□□□□□ -1.95
PTCH1-211ENST00000488809 KLKP1Q107X0 134 aa2.87□□□□□ -1.95
PTCH1-211ENST00000488809 SPRR2FQ96RM1 72 aa2.87□□□□□ -1.95
PTCH1-211ENST00000488809 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
PTCH1-211ENST00000488809 KRTAP2-1Q9BYU5 128 aa2.87□□□□□ -1.95
PTCH1-211ENST00000488809 LOC110117498A0A087WWA1 95 aa2.86□□□□□ -1.95
PTCH1-211ENST00000488809 CRIPTQ9P021 101 aa2.85□□□□□ -1.95
PTCH1-211ENST00000488809 K7EQZ3 153 aa2.84□□□□□ -1.95
PTCH1-211ENST00000488809 ATXN8Q156A1 80 aa2.83□□□□□ -1.96
PTCH1-211ENST00000488809 Q5W150 140 aa2.83□□□□□ -1.96
PTCH1-211ENST00000488809 LCA10Q71F78 164 aa2.83□□□□□ -1.96
PTCH1-211ENST00000488809 PRO2289Q9P1D8 64 aa2.83□□□□□ -1.96
PTCH1-211ENST00000488809 HCG22E2RYF7 251 aa2.82□□□□□ -1.96
PTCH1-211ENST00000488809 CXCL6P80162 114 aa2.82□□□□□ -1.96
PTCH1-211ENST00000488809 C14orf132Q9NPU4 83 aa2.82□□□□□ -1.96
PTCH1-211ENST00000488809 BPY2O14599 106 aa2.81□□□□□ -1.96
PTCH1-211ENST00000488809 CASC2Q6XLA1 102 aa2.81□□□□□ -1.96
PTCH1-211ENST00000488809 C1orf64Q8NEQ6 169 aa2.81□□□□□ -1.96
PTCH1-211ENST00000488809 SMCPP49901 116 aaPredicted RBP2.8□□□□□ -1.96
PTCH1-211ENST00000488809 KRTAP8-1Q8IUC2 63 aa2.8□□□□□ -1.96
PTCH1-211ENST00000488809 SPRR2DP22532 72 aa2.79□□□□□ -1.96
PTCH1-211ENST00000488809 LCE1AQ5T7P2 110 aa2.78□□□□□ -1.96
PTCH1-211ENST00000488809 KRTAP3-1Q9BYR8 98 aa2.78□□□□□ -1.96
PTCH1-211ENST00000488809 UQCR10Q9UDW1 63 aa2.77□□□□□ -1.97
PTCH1-211ENST00000488809 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
PTCH1-211ENST00000488809 KRTAP5-3Q6L8H2 238 aa2.75□□□□□ -1.97
PTCH1-211ENST00000488809 A8MUN3 132 aa2.74□□□□□ -1.97
PTCH1-211ENST00000488809 PLAC4Q8WY50 150 aa2.74□□□□□ -1.97
PTCH1-211ENST00000488809 KRTAP4-8Q9BYQ9 185 aa2.74□□□□□ -1.97
PTCH1-211ENST00000488809 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
PTCH1-211ENST00000488809 LCE3BQ5TA77 95 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms